Job Description A1A535 Confidence 97.43% Date Wed Jul 10 14:03:03 BST 2013 Rank 87 Aligned Residues 208 % Identity 12% Template c2db0B_ PDB info PDB header:protein binding Chain: B: PDB Molecule:253aa long hypothetical protein; PDBTitle: crystal structure of ph0542 Resolution 2.20 Å Model Dimensions (Å) X:36.645 Y:64.565 Z:29.841

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.
Predicted Secondary structure																																																								.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.
Query Sequence		V	L	A	V	P	I	A	V	K	F	L	H	R	G	S	K	E	L	C	R	N	M	S	N	Y	L	S	L	A	A	I	T	K	A	D	L	L	A	D	H	T	E	G	I	I	K	S	I	L	Q	G	N	A	M	.	.	.	.	.	L
Query Conservation																																																								.	.	.	.	.
Alig confidence																																																								.	.	.	.	.
Template Conservation
Template Sequence		E	S	V	L	K	K	L	I	E	L	L	D	D	D	L	W	T	V	V	K	N	A	I	S	I	I	M	V	I	A	K	T	R	E	D	L	Y	E	P	M	L	K	K	L	F	S	L	L	K	K	S	E	A	I	P	L	T	Q	E	I
Template Known Secondary structure												T	T		S	S															G	G	G		G	G	G
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	V	L	P	A	V	Y	E	K	Q	P	Q	P	I	N	R	H	L	A	E	L	L	A	L	M	S	Q	L	E	Q	T	E	Q	Y	H	L	L	R	L	L	H	V	A	A	K	R	K	D	V	E	V	V	Q	K	C	V	P	F	L
Query Conservation
Alig confidence																																																			.
Template Conservation																																																			.
Template Sequence		A	K	A	F	G	Q	M	A	K	E	K	P	E	L	V	K	S	M	I	P	V	L	F	A	N	Y	R	I	G	D	E	K	T	K	I	N	V	S	Y	A	L	E	E	I	A	K	A	N	P	.	M	L	M	A	S	I	V	R	D	F
Template Known Secondary structure																								T	T	T					S																				.
Template Predicted Secondary structure																																																			.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.																											.
Query SS confidence										.	.																											.
Query Sequence		I	R	N	L	K	D	S	T	.	.	Y	N	D	I	I	L	N	I	L	I	E	I	A	G	H	E	P	L	A	L	N	S	F	L	P	M	.	L	K	E	I	A	E	Q	F	P	Y	L	T	G	Q	M	A	R	I	F	G	A	V	G
Query Conservation										.	.																											.
Alig confidence										.	.																											.
Template Conservation
Template Sequence		M	S	M	L	S	S	K	N	R	E	D	K	L	T	A	L	N	F	I	E	A	M	G	E	N	S	F	K	Y	V	N	P	F	L	P	R	I	I	N	L	L	H	D	G	D	E	I	V	R	A	S	A	V	E	A	L	V	H	L	A
Template Known Secondary structure			G	G	G	G		S	S												T	T			T	T	T					G	G	G						G	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	D	E	E	R	A	R	S	C	L	R	Y	L	V	S	Q	L	A	N	M	E	H	P	F	H	H	I	L	L	L	E	I	K	S	I	T	D
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		T	L	N	D	K	.	L	R	K	V	V	I	K	R	L	E	E	L	N	D	T	S	S	L	V	N	K	T	V	K	E	G	I	S	R	L	L	L
Template Known Secondary structure							.											T				S																	T
Template Predicted Secondary structure							.
Template SS confidence
		210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D