Return to main results Retrieve Phyre Job Id

Job DescriptionA1A535
Confidence98.40%DateWed Jul 10 14:03:03 BST 2013
Rank64Aligned Residues111
% Identity14%Templatec2d9vA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:pleckstrin homology domain-containing protein PDBTitle: solution structure of the ph domain of pleckstrin homology2 domain-containing protein family b member 1 from mouse
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   713......720.........730.........740.........750.........760.........770..
Predicted Secondary structure 

























Query SS confidence 



























































Query Sequence  QDGQPLIEGKLKEKQVRWKFIKRWKTRYFTLAGNQLLFQKGKSKDDPDDPPIELSKVQSV
Query Conservation 




 








 



 


 








 
      

 
     


 




Alig confidence 














...









































Template Conservation    
   


 
 
  ...   
 



 


     
 
            
 
      
Template Sequence  GSSGLVRGGWLWRQS. . . SILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVVIHFNVRD
Template Known Secondary structure  S



...SSS

TTTSSSSTTS
TTT
Template Predicted Secondary structure 




...




















Template SS confidence 



























































   4.....10........ .20.........30.........40.........50.........60
 
   773......780. ........790.. .......800.........810.........820.....
Predicted Secondary structure 






......




.









Query SS confidence 








. . . . . .










.
































Query Sequence  KAVAKKRRD. . . . . . RSLPRAFEIFT. DSKTYVFKAKDEKNAEEWLQCINVALAQAKERE
Query Conservation 


   
  ......
 








.
 

 





 









 





 


Alig confidence 








......










.
































Template Conservation                       
           
 


  
   

 

  
        
Template Sequence  IKVGQECQDVQPPEGRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALMEANSTPAPAG
Template Known Secondary structure  GGG
SS



SS

TTTTTS

SST



TT
Template Predicted Secondary structure 






























Template SS confidence 



























































   61........70.........80.........90.........100.........110.........120
 
   826
Predicted Secondary structure 
Query SS confidence 
Query Sequence  S
Query Conservation   
Alig confidence 
Template Conservation 
Template Sequence  A
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 
   121
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D