 |
| Job Description | A1A535 | | Confidence | 83.73% | Date | Wed Jul 10 14:03:03 BST 2013 |
| Rank | 130 | Aligned Residues | 104 |
| % Identity | 17% | Template | c1ntyA_ |
| PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:triple functional domain protein; |
PDBTitle: crystal structure of the first dh/ph domain of trio to 1.7 a
|
| Resolution | 1.70 Å |
|
 |
|   |   |
715 | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . |
| Predicted Secondary structure |   |
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
G | Q | P | L | I | E | G | K | L | K | E | K | Q | V | R | W | K | F | I | K | R | W | K | T | R | Y | F | T | L | A | G | N | Q | L | L | F | Q | K | G | K | S | K | D | D | P | D | D | P | P | I | E | L | S | K | V | Q | S | V | K | A |
| Query Conservation |   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
| Template Sequence |   |
G | E | L | I | L | Q | E | S | F | Q | V | W | D | P | . |
K | T | L | I | R | K | G | R | E | R | H | L | F | L | F | E | M | S | L | V | F | S | K | E | V | . |
K | D | S | S | G | R | S | K | Y | L | Y | K | S | K | L | F | T | S | E |
| Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
| S | . | S | S | S | S |
|
|  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  | . |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  | G | G | G |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |
| . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
| . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
1425 | . | . | . | . | 1430 | . | . | . | . | . | . | . | . | |
. | 1440 | . | . | . | . | . | . | . | . | . | 1450 | . | . | . | . | . | . | . | . | . | 1460 | . | . | . | |
. | . | . | . | . | . | 1470 | . | . | . | . | . | . | . | . | . | 1480 | . | . |
|   |
|   |   |
775 | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | A | K | K | R | R | D | R | S | L | P | R | A | F | E | I | F | . |
. |
. |
. |
. |
T | D | S | K | T | Y | V | F | K | A | K | D | E | K | N | A | E | E | W | L | Q | C | I | N | V | A | L | A | Q |
| Query Conservation |   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|   |
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |
| Template Sequence |   |
L | G | V | T | E | H | V | E | G | D | P | C | K | F | A | L | W | V | G | R | T | P | T | S | D | N | K | I | V | L | K | A | S | S | I | E | N | K | Q | D | W | I | K | H | I | R | E | V | I | Q | E |
| Template Known Secondary structure |   |
 |  |  |  |
|
|
| T | T |
| T | T |  |  |  |  |  |  | S | S | S |
|
| T | T | T |
|  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
1483 | . | . | . | . | . | . | 1490 | . | . | . | . | . | . | . | . | . | 1500 | . | . | . | . | . | . | . | . | . | 1510 | . | . | . | . | . | . | . | . | . | 1520 | . | . | . | . | . | . | . | . | . | 1530 | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|