Return to main results Retrieve Phyre Job Id

Job DescriptionA1A535
Confidence86.20%DateWed Jul 10 14:03:03 BST 2013
Rank127Aligned Residues131
% Identity18%Templatec1dbhA_
PDB info PDB header:gene regulationChain: A: PDB Molecule:protein (human sos 1); PDBTitle: dbl and pleckstrin homology domains from hsos1
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   669670.........680.........690.........700.........710.........720........
Predicted Secondary structure 


























Query SS confidence 



























































Query Sequence  QKDLEQLQLHLEEVRFFDVFGFSETAGAWQCFMCNNPEKATVVNQDGQPLIEGKLKEKQV
Query Conservation   


  
  

    


 
        
 

 
 




    




 








 
Alig confidence 




























........






















Template Conservation                               ........    
    
 
   
       
Template Sequence  CSKSLAKRRLSESAAIKKXNEIQKNIDGW. . . . . . . . EGKDIGQCCNEFIXEGTLTRVGA
Template Known Secondary structure  ST

TTTS
........
SS
GGGT


TT
Template Predicted Secondary structure 


........
















Template SS confidence 



























































   391........400.........410......... 420.........430.........440..
 
   729730.........740.........750....... ..760.........770.........780..
Predicted Secondary structure 










.....













.
Query SS confidence 




























. . . . .
























.
Query Sequence  RWKFIKRWKTRYFTLAGNQLLFQKGKSKD. . . . . DPDDPPIELSKVQSVKAVAKKRRDR.
Query Conservation 



 


 








 
      

 .....
     


 







   
  
.
Alig confidence 
.......




















.....
























.
Template Conservation   .......     


 
 

  
                            
       
Template Sequence  K. . . . . . . HERHIFLFDGLXICCKSNHGQPRLPGASNAEYRLKEKFFXRKVQINDKDDTN
Template Known Secondary structure  S.......S
SS
TT



TTS


SS
S



SS
Template Predicted Secondary structure 
.......

























Template SS confidence 



























































   456 ...460.........470.........480.........490.........500........
 
   783......790.. .......800.........810....
Predicted Secondary structure 



.








Query SS confidence 









.





















Query Sequence  SLPRAFEIFT. DSKTYVFKAKDEKNAEEWLQCI
Query Conservation   








.
 

 





 









Alig confidence 









.





















Template Conservation       
 
         
   
  

  
   
Template Sequence  EYKHAFEIILKDENSVIFSAKSAEEKNNWXAAL
Template Known Secondary structure  S

S

TTS


SS
Template Predicted Secondary structure 








Template SS confidence 
































   509510.........520.........530.........540.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D