Job Description Q8K2K6 Confidence 27.77% Date Tue Jul 30 13:20:48 BST 2013 Rank 99 Aligned Residues 76 % Identity 12% Template c4bkxA_ PDB info PDB header:transcription Chain: A: PDB Molecule:metastasis-associated protein mta1; PDBTitle: the structure of hdac1 in complex with the dimeric elm2-sant domain2 of mta1 from the nurd complex Resolution 3.00 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.									.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.
Query Sequence		K	Q	E	E	K	H	L	K	M	L	R	D	M	T	G	L	P	H	N	R	K	C	F	D	C	D	Q	R	G	P	T	Y	V	N	M	T	V	G	S	F	V	C	T	S	C	S	G	S	.	.	.	.	.	.	.	.	L	R	G	L
Query Conservation																																																		.	.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	Q	I	D	Q	F	L	V	V	A	R	S	V	G	T	F	A	R	A	L	D	S	L	H	M	S	A	A	A	A	S	R	D	I	T	L	F	H	A	M	D	T	L	H	K	N	I	Y	D	I	S	K	A	I	S	A	L	V	P	Q
Template Known Secondary structure																			T	T													S														T	T	T										S	T	T
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	P	H	R	V	K	S	I	S	M	T	T	F	T	Q	Q	E	I	E	F	L	Q	K	H
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		G	G	.	P	V	L	C	R	D	E	M	E	E	W	S	A	S	E	A	N	L	F	E	E	A
Template Known Secondary structure		S		.											S
Template Predicted Secondary structure				.
Template SS confidence
		276	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D