Job Description Q8K2K6 Confidence 54.06% Date Tue Jul 30 13:20:48 BST 2013 Rank 28 Aligned Residues 17 % Identity 24% Template c3h00A_ PDB info PDB header:viral protein Chain: A: PDB Molecule:envelope glycoprotein gp160; PDBTitle: structure of the c-terminal domain of a putative hiv-1 gp41 fusion2 intermediate Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	K	Q	E	E	K	H	L	K	M	L	R	D	M	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	N	Q	Q	E	K	N	E	Q	E	L	L	E	L	D	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D