Job Description Q8K2K6 Confidence 56.22% Date Tue Jul 30 13:20:48 BST 2013 Rank 22 Aligned Residues 54 % Identity 26% Template c2zetD_ PDB info PDB header:signaling protein Chain: D: PDB Molecule:melanophilin; PDBTitle: crystal structure of the small gtpase rab27b complexed with2 the slp homology domain of slac2-a/melanophilin Resolution 3.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.													.	.	.	.	.	.	.	.	30	.	.	.	.	.						.	.	.	.	40	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Query Sequence		A	K	R	K	Q	E	E	K	H	L	K	M	L	R	D	M	T	.	.	.	.	.	.	.	.	.	.	.	.	G	L	P	H	N	R	K	C	F	D	C	D	Q	R	.	.	.	.	.	G	P	T	Y	V	N	M	T	V	G	S	F
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation
Template Sequence		L	R	R	R	E	E	E	R	L	Q	G	L	K	G	K	I	Q	K	E	S	S	K	R	E	L	L	S	D	T	A	H	L	N	E	T	H	C	A	R	C	L	Q	P	Y	R	L	L	L	N	S	R	R	Q	C	L	E	C	S	L	F
Template Known Secondary structure																											G	G	G	S	T	T					B		S	S	S			B	G	G	G		S	S						T	T	T
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		48	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	T	S	C	S	G	S	L	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	C	K	S	C	S	H	A	H	P	E
Template Known Secondary structure				G	G	G					S	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D