Return to main results Retrieve Phyre Job Id

Job DescriptionQ8K2K6
Confidence100.00%DateTue Jul 30 13:20:48 BST 2013
Rank11Aligned Residues134
% Identity20%Templatec2crwA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:adp-ribosylation factor gtpase-activating PDBTitle: solution structure of the arfgap domain of adp-ribosylation2 factor gtpaseactivating protein 3 (arfgap 3)
ResolutionUNK
Model Dimensions (Å)X:59.250 Y:40.179 Z:31.327

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.
Predicted Secondary structure 






















Query SS confidence 



























































Query Sequence  AASAKRKQEEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNP
Query Conservation                    
     
  
  
                
  
   

    
Alig confidence 



























































Template Conservation     

             
   
 
  



    
 
 
   




  


 

 

 
Template Sequence  SSGMGDPSKQDILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGV
Template Known Secondary structure 


S



STTTSB
SSS

BS


TTTT


T
Template Predicted Secondary structure 




























Template SS confidence 



























































   5....10.........20.........30.........40.........50.........60....
 
   62 .......70. ........80.........90.........100..... ....110.......
Predicted Secondary structure 
.


.












..



Query SS confidence 
.








.

































. .











Query Sequence  P. HRVKSISMT. TFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIP. . DFRDPQKVKEFL
Query Conservation   .  
 
    .             

                   ..           
Alig confidence 
.








.

































..











Template Conservation   

 


  


 
    
  
  


  
                

 
  
  

  
Template Sequence  HLSFIRSTELDSNWSWFQLRCMQVGGNASASSFFHQHGCSTNDTNAKYNSRAAQLYREKI
Template Known Secondary structure  TT


SSS




TT






TTS
Template Predicted Secondary structure 
























Template SS confidence 



























































   65....70.........80.........90.........100.........110.........120....
 
   118. 120.........130.....
Predicted Secondary structure  .......











Query SS confidence 

. . . . . . .















Query Sequence  QE. . . . . . . KYEKKRWYVPPEQAKV
Query Conservation    ....... 
              
Alig confidence 

.......















Template Conservation           

  
   
   



Template Sequence  KSLASQATRKHGTDLWLDSSGPSSG
Template Known Secondary structure  TTSSS
TTS






Template Predicted Secondary structure 










Template SS confidence 
























   125....130.........140.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D