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Job DescriptionQ04736
Confidence100.00%DateWed Jul 10 14:37:29 BST 2013
Rank96Aligned Residues262
% Identity37%Templatec4hzsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:activated cdc42 kinase 1; PDBTitle: crystal structure of ack1 kinase domain with c-terminal sh3 domain
Resolution3.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   267..270.........280.........290........ .300.........310. .......
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Query Sequence  AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT. . . . KVAIKTLKPGTMM. . . . PEAFLQE
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Template Sequence  TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE
Template Known Secondary structure  SSB

GGG



B

TTS
TTS


S



S
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   118.120.........130.........140.........150.........160.........170.......
 
   319320.........330.........340.........350.........360.........370........
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Query Sequence  AQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMSKGSLLDFLKEGDGKYLKLPQLVDMAAQI
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Template Sequence  VNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ. GHFLLGTLSRYAVQV
Template Known Secondary structure  T


TTB


SSS



SS
BST.T
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   178.180.........190.........200.........210.........220. ........230......
 
   379380.........390.........400.........410.........420.........430........
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Query Sequence  ADGMAYIERMNYIHRDLRAANILVGENLICKIADFGLARLIEDNEYTARQGAKFPIKWTA
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Template Sequence  AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM. . . . . . . . . . . RALPVPFAWCA
Template Known Secondary structure  TT


S

SGGGSSSS


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   237..240.........250.........260.........270.... .....280.....
 
   439440.........450.........460.........470.........480....... ..490.......
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Query Sequence  PEAALYGRFTIKSDVWSFGILQTELVTKGRVPYPGMVNREVLEQVERGY. RMPCPQGCPE
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Template Sequence  PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ
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TTT

TTTT

TS






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   299300.........310.........320.........330.........340.........350........
 
   498.500.........510.........520.........530.........540
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Query Sequence  SLHELMNLCWKKDPDERPTFEYIQSFLEDYFTATEPQYQPGEN
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Template Sequence  DIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRALQDFEE
Template Known Secondary structure  T
SSGGGS

T




S
B

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   359360.........370.........380.........390.........400.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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