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Job DescriptionQ04736
Confidence100.00%DateWed Jul 10 14:37:29 BST 2013
Rank266Aligned Residues243
% Identity26%Templatec4b99A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase 7; PDBTitle: crystal structure of mapk7 (erk5) with inhibitor
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   273......280.........290....... ..300.........310.... .....320........
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Query Sequence  ESLRLEVKLGQGCFGEVWMGTWNGT. TKVAIKTLKPGTMMPEA. . . FLQEAQIMKKLRHD
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Template Sequence  DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD
Template Known Secondary structure  SS
SS
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   53......60.........70.........80.........90.........100.........110..
 
   329330.........340 .........350.........360.........370.........380.
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Query Sequence  KLVPLYAVVSEE. . . . . . . PIYIVTEFMSKGSLLDFLKEGDGKYLKLPQLVDMAAQIADG
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Template Sequence  NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIH. . . SSQPLTLEHVRYFLYQLLRG
Template Known Secondary structure  TB




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   113......120.........130.........140......... 150.........160.........
 
   382.......390.........400.........410.........420.........430.........440.
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Query Sequence  MAYIERMNYIHRDLRAANILVGENLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEA
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Template Sequence  LKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLQY. . . FMTEYVATRWYRAPELM
Template Known Secondary structure  TT
B




GGG
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   170.........180.........190.........200......... 210.........220......
 
   442.......450.........460.........470.........480.........490..
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Query Sequence  ALYGRFTIKSDVWSFGILQTELVTKGRVPYPGMVNREVLEQVERGYRMPCP. . . . . . . . .
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Template Sequence  LSLHEYTQAIDLWSVGCIFGEMLA. RRQLFPGKNYVHQLQLIMMVLGTPSPAVIQRVRAY
Template Known Secondary structure  TT
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   234.....240.........250....... ..260.........270.........280.........290..
 
   493......500.........510.........520..
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Query Sequence  . . . . . . . . . . . . . . . . QGCPESLHELMNLCWKKDPDERPTFEYIQS
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Template Sequence  IQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR
Template Known Secondary structure  SS






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   298.300.........310.........320.........330.........340...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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