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Job DescriptionQ04736
Confidence100.00%DateWed Jul 10 14:37:29 BST 2013
Rank45Aligned Residues246
% Identity22%Templatec3soaA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase type ii subunit PDBTitle: full-length human camkii
Resolution3.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   272.......280.........290.........300......... 310.........320........
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Query Sequence  RESLRLEVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT. . . MMPEAFLQEAQIMKKLRHD
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Template Sequence  TEEYQLFEELGKGSVVRRCVKVL. AGQEYAAMIINTKKLSARDHQKLEREARICRLLKHP
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TT.TTS
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BT
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   10.........20.........30.. .......40.........50.........60........
 
   329330......... 340.........350.........360.........370.........380.......
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Query Sequence  KLVPLYAVVSE. EPIYIVTEFMSKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER
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Template Sequence  NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR. . EYYSEADASHCIQQILEAVLHCHQ
Template Known Secondary structure  TB


SS


B

B
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   71........80.........90.........100.... .....110.........120........
 
   388.390.........400....... ..410.........420.........430.........440....
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Query Sequence  MNYIHRDLRAANILVGENLI. . . CKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY
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Template Sequence  MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ. QAWFGFAGTPGYLSPEVLRK
Template Known Secondary structure  TT
B



SSTTSBSSTT




SS
B


TT
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B


S
S
GGG

TT
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   129130.........140.........150.........160....... ..170.........180.......
 
   445....450.........460.........470.........480........ .490.........500.
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Query Sequence  GRFTIKSDVWSFGILQTELVTKGRVPYPGMVNREVLEQVERGYR. . . MPCPQGCPESLHE
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Template Sequence  DPYGKPVDLWACGVILYILLV. GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD
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B
T.SS
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TTTTTTS
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   188.190.........200........ .210.........220.........230.........240......
 
   502.......510.........520..
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Query Sequence  LMNLCWKKDPDERPTFEYIQS
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Template Sequence  LINKMLTINPSKRITAAEALK
Template Known Secondary structure  S
SSTTTS

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   247..250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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