Job Description Q04736 Confidence 100.00% Date Wed Jul 10 14:37:29 BST 2013 Rank 159 Aligned Residues 242 % Identity 16% Template c3q60A_ PDB info PDB header:transferase Chain: A: PDB Molecule:rop5b; PDBTitle: crystal structure of virulent allele rop5b pseudokinase domain bound2 to atp Resolution 1.72 Å

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		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.					.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.																					.	.	.	.
Query SS confidence																						.																					.	.	.	.
Query Sequence		L	R	L	E	V	K	L	G	Q	G	C	F	G	E	V	W	M	G	T	W	.	N	G	T	T	K	V	A	I	K	T	L	K	P	G	T	M	M	P	E	A	.	.	.	.	F	L	Q	E	A	Q	I	M	K	K	L	R	H	D	K
Query Conservation																						.																					.	.	.	.
Alig confidence																						.																					.	.	.	.
Template Conservation
Template Sequence		L	K	L	V	E	P	L	R	V	G	D	R	S	V	V	F	L	V	R	D	V	E	R	L	E	D	F	A	L	K	V	F	T	M	G	A	E	N	S	R	S	E	L	E	R	L	H	E	A	T	F	A	A	A	R	L	L	G	R	L
Template Known Secondary structure												S	S									T	T	T	T												S	T	T																						B
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.															.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.						360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Query Sequence		L	V	P	L	Y	A	V	V	S	E	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	I	V	T	E	F	M	S	K	G	S	L	L	D	F	L	K	.	.	.	.	.	E	G	D	G	K	Y	L	K	L	P	Q
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.									.										.	.	.	.	.
Template Conservation																																				.
Template Sequence		L	L	P	S	D	A	V	A	V	Q	S	Q	P	P	F	A	Q	L	S	P	G	Y	A	V	A	N	Y	L	L	L	M	P	A	A	.	S	V	D	L	E	L	L	F	S	T	L	D	F	V	Y	V	F	R	G	D	E	G	I	L	A
Template Known Secondary structure											T	T	S		S	S	S	B		S																.	S													S
Template Predicted Secondary structure																																				.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	D	M	A	A	Q	I	A	D	G	M	A	Y	I	E	R	M	N	Y	I	H	R	D	L	R	A	A	N	I	L	V	G	E	N	L	I	C	K	I	A	D	F	G	L	A	R	L	I	E	D	N	E	Y	T	A	R	Q	G	A
Query Conservation
Alig confidence																																																					.	.	.	.
Template Conservation																																																					.	.	.	.
Template Sequence		L	H	I	L	T	A	Q	L	I	R	L	A	A	N	L	Q	S	K	G	L	V	H	G	H	F	T	P	D	N	L	F	I	M	P	D	G	R	L	M	L	G	D	V	S	A	L	W	K	V	G	T	.	.	.	.	R	G	P	A	S
Template Known Secondary structure																			T	T				T	T		S	G	G	G					T	T	S							G	G	G				T	T		.	.	.	.				G	G
Template Predicted Secondary structure																																																					.	.	.	.
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.					.	.	.	420	.
		431	.	.	.	.	.	.	.	.	440	.	.			.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		K	F	P	I	K	W	T	A	P	E	A	A	.	.	L	Y	G	R	F	T	I	K	S	D	V	W	S	F	G	I	L	Q	T	E	L	V	T	K	G	R	V	P	Y	P	G	M	V	N	R	E	V	L	E	Q	V	E	R	G	Y	R
Query Conservation														.	.
Alig confidence														.	.																								.
Template Conservation																																							.
Template Sequence		S	V	P	V	T	Y	A	P	R	E	F	L	N	A	S	T	A	T	F	T	H	A	L	N	A	W	Q	L	G	L	S	I	Y	R	V	W	C	.	L	F	L	P	F	G	L	V	T	P	G	I	K	G	S	W	K	R	P	S	L	R
Template Known Secondary structure		G	S		G	G	G							T		S																							.	S	S		S	T	T	B			T	T		T	T				B			T	T
Template Predicted Secondary structure																																							.
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.		.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
		489	490	.	.	.									.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.
Query Sequence		M	P	C	P	Q	.	.	.	.	.	.	.	.	G	C	P	E	S	L	H	E	L	M	N	L	C	W	K	K	D	P	D	E	R	P	T	F	E	Y	I	Q	S
Query Conservation							.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	P	G	T	D	S	L	A	F	G	S	C	T	P	L	P	D	F	V	K	T	L	I	G	R	F	L	N	F	D	R	R	R	R	L	L	P	L	E	A	M	E
Template Known Secondary structure		S					S				T	T	S	S														T		S	S	T	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D