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Job DescriptionQ04736
Confidence100.00%DateWed Jul 10 14:37:29 BST 2013
Rank46Aligned Residues252
% Identity27%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   273......280.........290...... ...300.........310.........320.........330.
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Query Sequence  ESLRLEVKLGQGCFGEVWMGTWNG. TTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLV
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Template Sequence  ESYFKV. . RKLGSYGEVLLCKEKNGHSEKAIKVIK. . KKFHEEIYNEISLLKSLDHPNII
Template Known Secondary structure  GT..

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   55....60 .........70.........80....... ..90.........100.........110
 
   332....... 340.........350.........360.........370.........380.........390
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Query Sequence  PLYAVVSE. EPIYIVTEFMSKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNY
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Template Sequence  KLFDVFEDKKYFYLVTEFYEGGELFEQIINR. . HKFDECDAANIMKQILSGICYLHKHNI
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   129130.........140.........150......... 160.........170.........180......
 
   391........400.. .......410.........420.........430.........440.......
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Query Sequence  IHRDLRAANILV. . . GENLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF
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Template Sequence  VHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL. . RDRLGTAYYIAPEVLKK. KY
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SGGGSSTT

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   187..190.........200.........210.........220.... .....230.........240. ..
 
   448.450.........460.........470.........480.........490... ......500....
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Query Sequence  TIKSDVWSFGILQTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQ. . . GCPESLHELMN
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Template Sequence  NEKCDVWSCGVIMYILLC. GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIK
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   244.....250.........260. ........270.........280.........290.........300..
 
   505....510.........520.. .......530....
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Query Sequence  LCWKKDPDERPTFEYIQS. . FLEDYFTATEPQ
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Template Sequence  LMLTYDYNKRCTAEEALNSRWIKKYANNINKS
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SSTTTS

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GG
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   303......310.........320.........330....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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