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Job DescriptionQ04736
Confidence100.00%DateWed Jul 10 14:37:29 BST 2013
Rank183Aligned Residues237
% Identity27%Templatec3igoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of cryptosporidium parvum cdpk1, cgd3_920
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   273......280.........290.... .....300....... ..310.........320.........
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Query Sequence  ESLRLEVKLGQGCFGEVWMGTW. NGTTKVAIKTLKP. . GTMMPEAFLQEAQIMKKLRHDK
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKTSTILREVELLKKLDHPN
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   74.....80.........90.........100.........110.........120.........130...
 
   330......... 340.........350.........360.........370.........380........
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Query Sequence  LVPLYAVVSE. EPIYIVTEFMSKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM
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Template Sequence  IMKLFEILEDSSSFYIVGELYTGGELFDEIIKR. . KRFSEHDAARIIKQVFSGITYMHKH
Template Known Secondary structure  B


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   135....140.........150.........160....... ..170.........180.........190..
 
   389390.........400.. .......410.........420.........430.........440.....
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Query Sequence  NYIHRDLRAANILV. . . GENLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG
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Template Sequence  NIVHRDLKPENILLESKEKDCDIKIIDFGLS. . . . . . . . . . TCFQQNTTAYYIAPEVLRG
Template Known Secondary structure  T


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GGGSSSSTT


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T..........TTB




GGG

GGGGGT
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   193......200.........210.........220... ......230.........240..
 
   446...450.........460.........470.........480....... ..490.........500..
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Query Sequence  RFTIKSDVWSFGILQTELVTKGRVPYPGMVNREVLEQVERGY. . . RMPCPQGCPESLHEL
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Template Sequence  TYDEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL
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   250.........260......... 270.........280.........290.........300........
 
   503......510.........520..
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Query Sequence  MNLCWKKDPDERPTFEYIQS
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Template Sequence  IRKMLTFHPSLRITATQCLE
Template Known Secondary structure  T
SSTTTS

T
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   309310.........320........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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