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Job DescriptionQ04736
Confidence100.00%DateWed Jul 10 14:37:29 BST 2013
Rank215Aligned Residues260
% Identity26%Templatec3hkoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase with a kinase PDBTitle: crystal structure of a cdpk kinase domain from cryptosporidium parvum,2 cgd7_40
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   272.......280.........290...... ...300....... ..310.........320.......
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Query Sequence  RESLRLEVKLGQGCFGEVWMGTWNG. TTKVAIKTLKP. . . GTMMPEAFLQEAQIMKKLRH
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Template Sequence  QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQKDVERIKTEVRLMKKLHH
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   7..10.........20.........30.........40.........50.........60......
 
   328.330......... 340.........350.........
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Query Sequence  DKLVPLYAVVSE. EPIYIVTEFMSKGSLLDFLK. . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE
Template Known Secondary structure  TTB


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   70.........80.........90.........100.........110.........120.........
 
   360.........370.........380.........390.........400.. ......
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Query Sequence  . . . . . . . . . EGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILV. . GENLIC
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Template Sequence  EAINGSIFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEI
Template Known Secondary structure  S




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   130.........140.........150.........160.........170.........180.........
 
   409410.........420.........430.........440..... ....450.........460......
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Query Sequence  KIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG. . RFTIKSDVWSFGILQTELVTK
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Template Sequence  KLVDFGLSKEFYKLNNGAGT. . . . . PYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLM.
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   192.......200.........210. ........220.........230.........240.....
 
   467..470.........480....... ..490.........500.........510.........520...
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Query Sequence  GRVPYPGMVNREVLEQVERGY. . . RMPCPQGCPESLHELMNLCWKKDPDERPTFEYIQSF
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Template Sequence  GAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ.
Template Known Secondary structure  SS
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   254.....260.........270.........280.........290.........300.........310..
 
   524.....530.........
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Query Sequence  LEDYFTATEPQYQPGE
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Template Sequence  . HPWISQFSDKIYKMS
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   313......320.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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