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Job DescriptionQ04736
Confidence99.97%DateWed Jul 10 14:37:29 BST 2013
Rank323Aligned Residues178
% Identity17%Templatec3en9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:o-sialoglycoprotein endopeptidase/protein kinase; PDBTitle: structure of the methanococcus jannaschii kae1-bud32 fusion2 protein
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   271........280.........290.........300.........310.... .....320.
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Query Sequence  PRESLRLEVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEA. . . . . . . . . FLQEAQI
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Template Sequence  PNYRTDMVEVNWIGAEADIKRDSY. LDFDVIIKERVKKGYRDERLDENIRKSRTAREARY
Template Known Secondary structure  TT

GGGS






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   312.......320.........330..... ....340.........350.........360.........370
 
   322.......330......... 340.........350.........360.........370.........380
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Query Sequence  MKKLRHDKLVPLYAVVSE. EPIYIVTEFMSKGSLLDFLKEGDGKYLKLPQLVDMAAQIAD
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Template Sequence  LALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIEDN. . . . . . . . . . LDIAYKIGE
Template Known Secondary structure  GGGTT




TTTT


SGGGTTTT
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   388.390.........400.........410.........420........ .430.......
 
   381........390.........400.........410.........420.........430.........440
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Query Sequence  GMAYIERMNYIHRDLRAANILVGENLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPE
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Template Sequence  IVGKLHKNDVIHNDLTTSNFIFDKD. . LYIIDFGLGKISNLDEDKAVD. . . . . . LIVFKK
Template Known Secondary structure  TT
S


GGGSSS..


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   438.440.........450.........460.. .......470.........480... ......
 
   441........450.........460........
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Query Sequence  AALYGRFTIKSDVWSFGILQTELVTKGR
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Template Sequence  AVLSTHHEKFDEIWERFLEGYKSVY. DR
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   490.........500.........510.... ..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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