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Job DescriptionQ04736
Confidence100.00%DateWed Jul 10 14:37:29 BST 2013
Rank243Aligned Residues240
% Identity21%Templatec3cekA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of human dual specificity protein kinase (ttk)
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   265....270.........280.........290.........300.........310.. .......320.
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Query Sequence  KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMP. . . EAFLQEAQI
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Template Sequence  FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY
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TT

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   515....520.........530.........540.........550.........560.........570....
 
   322.... ...330......... 340.........350.........360.........370........
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Query Sequence  MKKLR. . HDKLVPLYAVVSE. EPIYIVTEFMSKGSLLDFLKEGDGKYLKLPQLVDMAAQI
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Template Sequence  LNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS. . . IDPWERKSYWKNM
Template Known Secondary structure  GGG
TTB


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   575....580.........590.........600.........610........ .620.........630.
 
   379380.........390.........400.........410.........420.........430........
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Query Sequence  ADGMAYIERMNYIHRDLRAANILVGENLICKIADFGLARLIEDNEYTARQGAKFPIKWTA
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Template Sequence  LEAVHTIHQHGIVHSDLKPANFLIVD. GMLKLIDFGIA. . . . . . . . . . . . . NQGTVNYMP
Template Known Secondary structure  TT






GGGT.T


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   632.......640.........650....... ..660........ .670.......
 
   439440...... ...450.........460.........470... ......480....... ..490.....
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Query Sequence  PEAALYGR. FTIKSDVWSFGILQTELVTKGRVPYPG. MVNREVLEQVERGY. RMPCPQGC
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Template Sequence  PEAIKDMSKISPKSDVWSLGCILYYMTY. GKTPFQQIINQISKLHAIIDPNHEIEFPDIP
Template Known Secondary structure  TT




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TTTT

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   692.......700.........710......... 720.........730.........740.........750
 
   496...500.........510.........520..
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Query Sequence  PESLHELMNLCWKKDPDERPTFEYIQS
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Template Sequence  EKDLQDVLKCCLKRDPKQRISIPELLA
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SSTTTS

T
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   761........770.........780.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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