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Job DescriptionQ04736
Confidence100.00%DateWed Jul 10 14:37:29 BST 2013
Rank82Aligned Residues249
% Identity24%Templatec2qg5D_
PDB info PDB header:transferaseChain: D: PDB Molecule:calcium/calmodulin-dependent protein kinase; PDBTitle: cryptosporidium parvum calcium dependent protein kinase cgd7_1840
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   272.......280.........290...... ...300..... ....310.........320.........
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Query Sequence  RESLRLEVKLGQGCFGEVWMGTWNG. TTKVAIKTL. KPGTMMPEAFLQEAQIMKKLRHDK
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Template Sequence  NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN
Template Known Secondary structure  TTTTT

TTT
S
TT

BTT
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   25....30.........40.........50.........60.........70.........80....
 
   330......... 340.........350.........360.........370.........380........
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Query Sequence  LVPLYAVVSE. EPIYIVTEFMSKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM
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Template Sequence  IIRLYETFEDNTDIYLVMELCTGGELFERV. . VHKRVFRESDAARIMKDVLSAVAYCHKL
Template Known Secondary structure  B


SS



SGGGGG..TTTSS

T
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   85....90.........100.........110.... .....120.........130.........140..
 
   389390.........400.. .......410.........420.........430.........440.....
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Query Sequence  NYIHRDLRAANILV. . . GENLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG
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Template Sequence  NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV. . GTPYYVSPQVLEGL
Template Known Secondary structure  T



SGGGSSSSTT




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TT

B



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GGGS
T
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   143......150.........160.........170.........180...... ...190.........200
 
   446...450.........460.........470.........480.........490.. .......500...
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Query Sequence  RFTIKSDVWSFGILQTELVTKGRVPYPGMVNREVLEQVERGYRMPCP. . QGCPESLHELM
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Template Sequence  . YGPECDEWSAGVMMYVLLC. GYPPFSAPTDEVMLKIREGTFTFPEKDWLNVSPQAESLI
Template Known Secondary structure  .B
TT.SS
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   201........210......... 220.........230.........240.........250........
 
   504.....510.........520.. ....
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Query Sequence  NLCWKKDPDERPTFEYIQS. . FLED
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Template Sequence  RRLLTKSPKQRITSLQALEHEWFEK
Template Known Secondary structure  S
SSTTTS

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   260.........270.........280....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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