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Job DescriptionQ04736
Confidence100.00%DateWed Jul 10 14:37:29 BST 2013
Rank171Aligned Residues238
% Identity26%Templatec2j2iB_
PDB info PDB header:transferaseChain: B: PDB Molecule:proto-oncogene serine/threonine-protein kinase pim-1; PDBTitle: crystal structure of the humab pim1 in complex with2 ly333531
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   273......280.........290......... 300......... 310.........320....
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Query Sequence  ESLRLEVKLGQGCFGEVWMGTWNGTTK. VAIKTLKPGT. . . . . . . MMPEAFLQEAQIMKK
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Template Sequence  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK
Template Known Secondary structure  TTTTTTGGG



TT

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   36...40.........50.........60.........70.........80.........90.....
 
   325. ...330......... 340.........350.........360.........370.........380.
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Query Sequence  LR. . HDKLVPLYAVVSE. EPIYIVTEFMSKGSLLDFLKEGDGKYLKLPQLVDMAAQIADG
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Template Sequence  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER. GALQEELARSFFWQVLEA
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SSS
SB


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   96...100.........110.........120.........130...... ...140.........150....
 
   382.......390.........400... ......410.........420.........430.........440
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Query Sequence  MAYIERMNYIHRDLRAANILVG. ENLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPE
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Template Sequence  VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT. . . RVYSPPE
Template Known Secondary structure  TT



SGGGTTTT


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   155....160.........170.........180.........190.........200.... .....210.
 
   441...... ..450.........460.........470.........480.........490.........
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Query Sequence  AALYGRF. TIKSDVWSFGILQTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESL
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Template Sequence  WIRYHRYHGRSAAVWSLGILLYDMVC. GDIPFEHDEE. . . . . . . IIGGQVFFRQRVSSEC
Template Known Secondary structure  S
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   212.......220.........230....... ..240....... ..250.........260...
 
   500.........510.........520..
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Query Sequence  HELMNLCWKKDPDERPTFEYIQS
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Template Sequence  QHLIRWCLALRPSDRPTFEEIQN
Template Known Secondary structure  T
SSGGGS

T
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   264.....270.........280......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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