Return to main results Retrieve Phyre Job Id

Job DescriptionQ04736
Confidence99.31%DateWed Jul 10 14:37:29 BST 2013
Rank448Aligned Residues100
% Identity22%Templatec2hmhA_
PDB info PDB header:cytokine regulatorChain: A: PDB Molecule:suppressor of cytokine signaling 3; PDBTitle: crystal structure of socs3 in complex with gp130(ptyr757)2 phosphopeptide.
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   145....150.........160.........170.........180.........190.........200....
Predicted Secondary structure 







































Query SS confidence 



























































Query Sequence  VVPADSIQAEEWYFGKMGRKDAERLLLNPGNQRGIFLVRESETTKGAYSLSIRDWDEVRG
Query Conservation                
 


  
   
       





 
        


        
Alig confidence 


























..
























.....
Template Conservation        
    

 
 


 


 

 ..    
 



 
        


  ..... 
Template Sequence  VNAVRKLQESGFYWSAVTGGEANLLLS. . AEPAGTFLIRDSSDQRHFFTLSVKT. . . . . Q
Template Known Secondary structure  TSSTT

..TS
TT

STT
S.....T
Template Predicted Secondary structure 









..











.....
Template SS confidence 



























































   35....40.........50.........60. ........70.........80...... .
 
   205....210.........220 .........230.........240.........250.
Predicted Secondary structure 







....




















Query SS confidence 















. . . .






























Query Sequence  DNVKHYKIRKLDNGGY. . . . YITTRAQFDTLQKLVKHYTEHADGLCHKLTT
Query Conservation    
             ....         
   

             
  
Alig confidence 















....






























Template Conservation    
 
  
                   
 

  

  
             
Template Sequence  SGTKNLRIQEGGSFSLQSDPRSTQPVPRFDVLKLVHHYMPPQAYYIYKIPL
Template Known Secondary structure  TB

TT
B
B


TT
SS



B

T






Template Predicted Secondary structure 



























Template SS confidence 


















































   88.90.........100.........110.........120.........130........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D