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Job DescriptionQ04736
Confidence99.63%DateWed Jul 10 14:37:29 BST 2013
Rank352Aligned Residues107
% Identity24%Templatec2eo6A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:b-cell linker protein; PDBTitle: solution structure of the sh2 domain from mouse b-cell2 linker protein blnk
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160.........170.........180.........190.
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Query Sequence  ATGKSGYIPSNYVVPADSIQAEEWYFGKMGRKDAERLLLNPGNQRGIFLVRESETTKGA.
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Template Sequence  SSGSSGPFNSTFADQEAELLGKPWYAGACDRKSAEEALHRSN. KDGSFLIRKSSGHDSKQ
Template Known Secondary structure 
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SSTT

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B

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   2.......10.........20.........30.........40... ......50.........60
 
   192.......200.........210.........220.. .......230.........240.....
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Query Sequence  . YSLSIRDWDEVRGDNVKHYKIRKLDNGGYYI. . . . . TTRAQFDTLQKLVKHYTEHADGL
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Template Sequence  PYTLVAF. . . . . FNKRVYNIPVRFIEATKQYALGKKKNGEEYFGSVVEIVNSHQHNPLVL
Template Known Secondary structure  S.....TT
TTTT
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   61...... ..70.........80.........90.........100.........110.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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