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Job DescriptionQ04736
Confidence100.00%DateWed Jul 10 14:37:29 BST 2013
Rank116Aligned Residues247
% Identity23%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   271........280.........290....... ..300.........310.... .....320......
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Query Sequence  PRESLRLEVKLGQGCFGEVWMGTWNGT. TKVAIKTLKPGTMMPEA. . . FLQEAQIMKKLR
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Template Sequence  FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ
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TTTTTTTT


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   910.........20.........30.........40.........50.........60........
 
   327..330......... 340.........350.........360.........370.........380.....
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Query Sequence  HDKLVPLYAVVSE. EPIYIVTEFMSKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYI
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Template Sequence  HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI. . VAREFYSEADASHCIQQILESIAYC
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TTB


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S
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   6970.........80.........90.........100. ........110.........120......
 
   386...390.........400.. .......410.........420.........430.........440..
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Query Sequence  ERMNYIHRDLRAANILV. . . GENLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAA
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Template Sequence  HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS. . EAWHGFAGTPGYLSPEVL
Template Known Secondary structure  TT
B



SGGGS
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TT
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B


S
S
GGG

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   127..130.........140.........150.........160...... ...170.........180....
 
   443......450.........460.........470.........480.........490.. .......
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Query Sequence  LYGRFTIKSDVWSFGILQTELVTKGRVPYPGMVNREVLEQVERGYRMPCP. . . QGCPESL
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Template Sequence  KKDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA
Template Known Secondary structure  T

B
T.SS
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TTGGGGS
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   186...190.........200........ .210.........220.........230.........240....
 
   500.........510.........520..
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Query Sequence  HELMNLCWKKDPDERPTFEYIQS
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Template Sequence  KSLIDSMLTVNPKKRITADQALK
Template Known Secondary structure  S
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   245....250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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