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Job DescriptionQ04736
Confidence100.00%DateWed Jul 10 14:37:29 BST 2013
Rank148Aligned Residues247
% Identity21%Templatec1zrzA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, iota; PDBTitle: crystal structure of the catalytic domain of atypical2 protein kinase c-iota
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   270.........280.........290....... ..300...... ...310.........320....
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Query Sequence  IPRESLRLEVKLGQGCFGEVWMGTWNGT. TKVAIKTLK. . . . PGTMMPEAFLQEAQIMKK
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Template Sequence  LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ
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STT
SSTTT

GGG

STTTTT
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   240.........250.........260.........270.........280.........290.........
 
   325....330......... 340.........350.........360.........370.........380..
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Query Sequence  . LRHDKLVPLYAVVSE. EPIYIVTEFMSKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGM
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Template Sequence  ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ. . RKLPEEHARFYSAEISLAL
Template Known Secondary structure  TTSSTTB


B
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   300.........310.........320.........330........ .340.........350.......
 
   383......390.........400.........410.........420.........430.........440..
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Query Sequence  AYIERMNYIHRDLRAANILVGENLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAA
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Template Sequence  NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP. . GDTTSFCGTPNYIAPEIL
Template Known Secondary structure  TT
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GGG
TTS



TT
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T..T

B


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GGG

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   358.360.........370.........380.........390....... ..400.........410.....
 
   443......450.........460.........470.........480.........490.........500..
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Query Sequence  LYGRFTIKSDVWSFGILQTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHEL
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Template Sequence  RGEDYGFSVDWWALGVLMFEMMA. GRSPFDQNTEDYLFQVILEK. QIRIPRSMSVKAASV
Template Known Secondary structure  TT

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   417..420.........430......... 440.........450......... 460.........470....
 
   503......510...... ...520..
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Query Sequence  MNLCWKKDPDERPT. . . . . . FEYIQS
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Template Sequence  LKSFLNKDPKERLGCLPQTGFADIQG
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SSSTTSTTTSTTT
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   484.....490.........500.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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