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Job DescriptionQ04736
Confidence100.00%DateWed Jul 10 14:37:29 BST 2013
Rank315Aligned Residues162
% Identity52%Templatec1x27F_
PDB info PDB header:signaling proteinChain: F: PDB Molecule:proto-oncogene tyrosine-protein kinase lck; PDBTitle: crystal structure of lck sh2-sh3 with sh2 binding site of2 p130cas
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   93......100.........110.........120.........130.........140.........150..
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Query Sequence  IFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWEARSIATGKSGYIPSNYVVPADSIQ
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Template Sequence  LVIALHSYEPSHDGDLGFEKGEQLRILEQ. SGEWWKAQSLTTGQEGFIPFNFVAKANSLE
Template Known Secondary structure  SS
B


STTB

B
TT



.BTTSSS

GGG
S
ST
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   65....70.........80.........90... ......100.........110.........120...
 
   153......160.........170.........180.........190.........200.........210..
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Query Sequence  AEEWYFGKMGRKDAERLLLNPGNQRGIFLVRESETTKGAYSLSIRDWDEVRGDNVKHYKI
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Template Sequence  PEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKI
Template Known Secondary structure  TSTTB
SS

TSSS

TT
SSSTT

SSS
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   124.....130.........140.........150.........160.........170.........180...
 
   213......220.........230.........240.........250.....
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Query Sequence  RKLDNGGYYITTRAQFDTLQKLVKHYTEHADGLCHKLTTVCPT
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Template Sequence  RNLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPCQT
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BSS

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   184.....190.........200.........210.........220......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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