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Job DescriptionQ04736
Confidence99.96%DateWed Jul 10 14:37:29 BST 2013
Rank324Aligned Residues136
% Identity19%Templatec1tqmA_
PDB info PDB header:ribosomeChain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of a. fulgidus rio2 serine protein kinase bound to2 amppnp
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   275....280.........290.........300.........310. ........320........
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Query Sequence  LRLEVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM. . . . . . PEAFLQEAQIMKKLRHD
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Template Sequence  DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVKVKEHFSVLAIRSARNEFRALQKLQGL
Template Known Secondary structure  S
SSTTT






TTTS
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   92.......100.........110.........120.........130.........140.........150.
 
   329330.........340.........350.........360.........370.........380........
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Query Sequence  KLVPLYAVVSEEPIYIVTEFMSKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM
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Template Sequence  AVPKVYAWEG. . . NAVLMELIDAKEL. . . . . . . . . YRVRVENPDEVLDMILEEVAKFYHR
Template Known Secondary structure  SS

T...T



G.........GG


S
T
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   165....170.... .....180....... ..190.........200.........210..
 
   389390.........400.........410.........420...
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Query Sequence  NYIHRDLRAANILVGENLICKIADFGLARLIEDNE
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Template Sequence  GIVHGDLSQYNVLVSEEG. IWIIDFPQSVEVGEEG
Template Known Secondary structure  T
SS

TTTTT.


TT
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   213......220.........230 .........240......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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