Return to main results Retrieve Phyre Job Id

Job DescriptionA2A5Z6
Confidence99.75%DateWed Jul 10 14:17:52 BST 2013
Rank25Aligned Residues124
% Identity21%Templatec1dqvA_
PDB info PDB header:endocytosis/exocytosisChain: A: PDB Molecule:synaptotagmin iii; PDBTitle: crystal structure of synaptotagmin iii c2a/c2b
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40. ........50.........60.......
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Query Sequence  GPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVV. . DGSGQCHSTDTVKNTLDPKWNQHYDL
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Template Sequence  GSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRK. KKFQTKVHRKTLNPIFNETFQF
Template Known Secondary structure  SS





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   310.........320.........330.........340...... ...350.........360........
 
   68.70... ......80.........90.........100.........110.........120...
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Query Sequence  YIGKSD. . . . SVTISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLCKLGPN
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Template Sequence  SVPLAELAQRKLHFSVYDFDRFSRHD. . . LIGQVVLDNLLELAEQ. PPDRPLWRDILEGG
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GGGGSS




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   369370.........380.........390.... .....400.........410 .........420....
 
   124.....130........
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Query Sequence  DNDTVRGQIVVSLQS
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Template Sequence  SEKADLGELNFSLCY
Template Known Secondary structure  S

S


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   425....430.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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