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Job DescriptionA2A5Z6
Confidence100.00%DateWed Jul 10 14:17:52 BST 2013
Rank5Aligned Residues369
% Identity54%Templatec2oniA_
PDB info PDB header:ligaseChain: A: PDB Molecule:e3 ubiquitin-protein ligase nedd4-like protein; PDBTitle: catalytic domain of the human nedd4-like e3 ligase
Resolution2.20 Å
Model Dimensions (Å)X:68.641 Y:71.477 Z:50.693

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   369370.........380.........390.........400.........410....... ..420.......
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Query Sequence  KRDLVQKLKILRQELSQQQPQAGHCRIEVSREEIFEESYRQVMKMRPKD. LWKRLMIKFR
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Template Sequence  SREFKQKYDYFRKKLKKPADIPNRFEXKLHRNNIFEESYRRIXSVKRPDVLKARLWIEF.
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SSS
S
GGG
S
GGGGGS.
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   574.....580.........590.........600.........610.........620.........630..
 
   428.430.........440.........450.........460.........470.... .....480......
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Query Sequence  GEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSA. VNPEHLSYFHFV
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Template Sequence  EEKGLDYGGVAREWFFLLSKEXFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFTFI
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SS
T
GGGSSSSTT



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TT
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   633......640.........650.........660.........670.........680.........690..
 
   487..490.........500.........510.........520.........530.........540......
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Query Sequence  GRIMGMAVFHGHYIDGGFTLPFYKQLLGKSITLDDMELVDPDLHNSLVWILENDITGVLD
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Template Sequence  GRVAGLAVFHGKLLDGFFIRPFYKXXLGKQITLNDXESVDSEYYNSLKWILENDPTE. LD
Template Known Secondary structure  T


SS
B
TT



TTT
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GG.G
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   694.....700.........710.........720.........730.........740.........750 ..
 
   547..550.........560.........570.........580.........590.........600......
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Query Sequence  HTFCVEHNAYGEIIQHELKPNGKSIPVTEENKKEYVRLYVNWRFLRGIEAQFLALQKGFN
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Template Sequence  LXFCIDEENFGQTYQVDLKPNGSEIXVTNENKREYIDLVIQWRFVNRVQKQXNAFLEGFT
Template Known Secondary structure 
BSTTSSTTGGG
B

TTTTTTS
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   753......760.........770.........780.........790.........800.........810..
 
   607..610.........620.........630.........640.... .....650.........660.....
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Query Sequence  EVIPQHLLKTFDEKELELIICGLGKIDVSDWKVNTRLK. HCTPDSNVVKWFWKAVEFFDE
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Template Sequence  ELLPIDLIKIFDENELELLXCGLGDVDVNDWRQHSIYKNGYCPNHPVIQWFWKAVLLXDA
Template Known Secondary structure  S
TTS






T
TT

TT
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   813......820.........830.........840.........850.........860.........870..
 
   666...670.........680.........690.........700.........710.........720.....
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Query Sequence  ERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDACTNNLPKAHTCFNRIDIPPY
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Template Sequence  EKRIRLLQFVTGTSRVPXNGFAELYGSNGPQLFTIEQWG. SPEKLPRAHTCFNRLDLPPY
Template Known Secondary structure  S
S


TT
GGG
TT



S.
TTS

GGGT


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   873......880.........890.........900.........910. ........920.........930.
 
   726...730.........740
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Query Sequence  ESYEKLYEKLLTAIE
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Template Sequence  ETFEDLREKLLXAVE
Template Known Secondary structure  SS
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   932.......940......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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