Return to main results Retrieve Phyre Job Id

Job DescriptionA2A5Z6
Confidence99.69%DateWed Jul 10 14:17:52 BST 2013
Rank36Aligned Residues124
% Identity16%Templatec2r83B_
PDB info PDB header:endocytosis, exocytosisChain: B: PDB Molecule:synaptotagmin-1; PDBTitle: crystal structure analysis of human synaptotagmin 1 c2a-c2b
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40...... ...50.........60.........70
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Query Sequence  VKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQ. CHSTDTVKNTLDPKWNQHYDLYIG
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Template Sequence  NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVP
Template Known Secondary structure  T


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   156...160.........170.........180.........190.........200.........210.....
 
   71.. ......80.........90.........100.........110.........120......
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Query Sequence  KSD. . . . SVTISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLCKLGPNDND
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Template Sequence  YSELAGKTLVMAVYDFDRFSKHD. . . IIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEK
Template Known Secondary structure  GGG
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   216...220.........230........ .240.........250.........260.........270..
 
   127..130........
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Query Sequence  TVRGQIVVSLQS
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Template Sequence  LGDICFSLRYVP
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T
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   273......280....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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