Return to main results Retrieve Phyre Job Id

Job DescriptionA2A5Z6
Confidence99.43%DateWed Jul 10 14:17:52 BST 2013
Rank72Aligned Residues108
% Identity20%Templatec3fdwA_
PDB info PDB header:lipid binding proteinChain: A: PDB Molecule:synaptotagmin-like protein 4; PDBTitle: crystal structure of a c2 domain from human synaptotagmin-2 like protein 4
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30 .........40...... ...50.........60....
Predicted Secondary structure 













.









...







Query SS confidence 





















.















. . .

















Query Sequence  NGPVKLRLTVLCAKNLVKKDFF. RLPDPFAKVVVDGSGQ. . . CHSTDTVKNTLDPKWNQH
Query Conservation       
 
 

 
  
 


 
.
  



 
 


  
...  

 
 









 
Alig confidence 





















.















...

















Template Conservation       
 
 
  
 

                                            
Template Sequence  QQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDET
Template Known Secondary structure  TTTTS


SBTTTTB

T

SGGG



SS
SS
Template Predicted Secondary structure 

































Template SS confidence 



























































   368.370.........380.........390.........400.........410.........420.......
 
   65....70... ......80.........90.........100.........110.........120
Predicted Secondary structure 



....

























Query SS confidence 








. . . .














































Query Sequence  YDLYIGKSD. . . . SVTISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLCKL
Query Conservation 
 
 
    .... 
 
 
 
  
   
   



 
 
 
  
          
 
   
Alig confidence 








....















...











.














Template Conservation      
         
   
 
        ... 

   
 
   .        
  
   
Template Sequence  LRYEIPESLLAQRTLQFSVWHHGRFGRNT. . . FLGEAEIQMDSW. KLDKKLDHCLPLHGK
Template Known Secondary structure 

STTGGG

GGG
....

S
B

Template Predicted Secondary structure 















...
.








Template SS confidence 



























































   428.430.........440.........450...... ...460........ .470.........480...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D