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Job DescriptionA2A5Z6
Confidence100.00%DateWed Jul 10 14:17:52 BST 2013
Rank4Aligned Residues367
% Identity47%Templatec3g1nA_
PDB info PDB header:ligaseChain: A: PDB Molecule:e3 ubiquitin-protein ligase huwe1; PDBTitle: catalytic domain of the human e3 ubiquitin-protein ligase2 huwe1
Resolution2.60 Å
Model Dimensions (Å)X:58.786 Y:69.546 Z:48.048

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   375....380...... ...390.........400.........410.........420.........430..
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Query Sequence  KLKILRQELSQQ. . QPQAGHCRIEVSREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGL
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Template Sequence  RENLYFQGLERLDEGLRKEDMAVHVRRDHVFEDSYRELHRKSPEEMKNRLYIVFEGEEGQ
Template Known Secondary structure  TT




GGGTTS
TTGGGSTTS


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   3997..4000.........4010.........4020.........4030.........4040.........4050......
 
   433......440.........450.........460.........470.........480.........490..
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Query Sequence  DYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGM
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Template Sequence  DAGGLLREWYMIISREMFNPMYALFRTSPGDRVTYTINPSSHCNPNHLSYFKFVGRIVAK
Template Known Secondary structure 
TT
TTTT

TTTSS

GGGGGSTT
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   4057..4060.........4070.........4080.........4090.........4100.........4110......
 
   493......500.........510.........520.........530.........540.... .....550.
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Query Sequence  AVFHGHYIDGGFTLPFYKQLLGKSITLDDMELVDPDLHNSLVWILENDITGV. LDHTFCV
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Template Sequence  AVYDNRLLECYFTRSFYKHILGKSVRYTDMESEDYHFYQGLVYLLENDVSTLGYDLTFST
Template Known Secondary structure  TT





B
TT



GGGGTTT
TS
TTTTSS

BS
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   4117..4120.........4130.........4140.........4150.........4160.........4170......
 
   552.......560.........570.........580.........590.........600.........610.
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Query Sequence  EHNAYGEIIQHELKPNGKSIPVTEENKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQ
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Template Sequence  EVQEFGVCEVRDLKPNGANILVTEENKKEYVHLVCQMRMTGAIRKQLAAFLEGFYEIIPK
Template Known Secondary structure  TTSSTTGGG
B

TTTTTTS
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   4177..4180.........4190.........4200.........4210.........4220.........4230......
 
   612.......620.........630.........640.........650.........660.........670.
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Query Sequence  HLLKTFDEKELELIICGLGKIDVSDWKVNTRLKHCTPDSNVVKWFWKAVEFFDEERRARL
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Template Sequence  RLISIFTEQELELLISGLPTIDIDDLKSNTEYHKYQSNSIQIQWFWRALRSFDQADRAKF
Template Known Secondary structure  TTS






TTSS
TTSTS
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   4237..4240.........4250.........4260.........4270.........4280.........4290......
 
   672.......680.........690.........700.........710.........720.........730.
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Query Sequence  LQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDACTNNLPKAHTCFNRIDIPPYESYEKL
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Template Sequence  LQFVTGTSKVPLQGFAALEGMNGIQKFQIHRDDRSTDRLPSAHTCFNQLDLPAYESFEKL
Template Known Secondary structure  SSS


TT
GGG
TT




S
TTS

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   4297..4300.........4310.........4320.........4330.........4340.........4350......
 
   732.......740.
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Query Sequence  YEKLLTAIEE
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Template Sequence  RHMLLLAIQE
Template Known Secondary structure  TT
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   4357..4360......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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