Return to main results Retrieve Phyre Job Id

Job DescriptionA2A5Z6
Confidence99.76%DateWed Jul 10 14:17:52 BST 2013
Rank24Aligned Residues127
% Identity21%Templatec2nsqA_
PDB info PDB header:ligaseChain: A: PDB Molecule:e3 ubiquitin-protein ligase nedd4-like protein; PDBTitle: crystal structure of the c2 domain of the human e3 ubiquitin-protein2 ligase nedd4-like protein
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40... ......50.........
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Query Sequence  GGRRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDG. . . . . SGQCHSTDTVKNTLDP
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Template Sequence  SEDEGESRILRVKVVSGIDLAKKA. . . . SDPYVKLSLYVADENRELALVQTKTIKKTLNP
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   13......20.........30...... ...40.........50.........60........
 
   60.........70... ......80.........90.........100.........110........
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Query Sequence  KWNQHYDLYIGKSD. SVTISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLC
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Template Sequence  KWNEEFYFRVNPSNHRLLFEVFDENRLTRDD. . . FLGQVDVPLSHLPTEDPYTFKDFLL.
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   73......80.........90.........100... ......110.........120........
 
   119120.........130.........140
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Query Sequence  KLGPNDNDTVRGQIVVSLQSRD
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Template Sequence  . RPRSHKSRVKGFLRLKMAYMP
Template Known Secondary structure  .B
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   134.....140.........150....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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