Return to main results Retrieve Phyre Job Id

Job DescriptionA1L317
Confidence58.38%DateTue Jul 30 13:02:37 BST 2013
Rank140Aligned Residues111
% Identity11%Templatec3iynQ_
PDB info PDB header:virusChain: Q: PDB Molecule:hexon-associated protein; PDBTitle: 3.6-angstrom cryoem structure of human adenovirus type 5
Resolution3.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   74.....80.........90.........100.........110.........120.........130...
Predicted Secondary structure 



























































Query SS confidence 



























































Query Sequence  RGGFGAASSYGGGSGFGGSSGFGGGSGFGGGSGFGGGSSGGFSSYGGSMGCGLGGVSGYD
Query Conservation                                                              
Alig confidence 



























































Template Conservation 
 
 
 


 


 







 

 
 
 

 



    
 


   
  





  
Template Sequence  GSIVSSYLTTRMPPWAGVRQNVMGSSIDGRPVLPANSTTLTYETVSGTPLETAASAAASA
Template Known Secondary structure 


TTSS






SSS
SS





TT
SS


TT
GGGSS











TTTTT
Template Predicted Secondary structure 










































Template SS confidence 



























































   8.10.........20.........30.........40.........50.........60.......
 
   134.....140......... 150.........160.........170.........
Predicted Secondary structure 









..............
Query SS confidence 















. . . . . . . . . . . . . .





























Query Sequence  GGLLSGSEKQTMQDLN. . . . . . . . . . . . . . DRLANYLDKVRALEEANTDLECKIKDWYGK
Query Conservation          
  
  
 ..............  
     

  

  
  

  
      
Alig confidence 















..............





























Template Conservation    

                          
 
  
 


  




  




 


  
Template Sequence  AAATARGIVTDFAFLSPLASSAASRSSARDDKLTALLAQLDSLTRELNVVSQQLLDLRQQ
Template Known Secondary structure  TTTTTTTS



SSTTTTT
Template Predicted Secondary structure 


Template SS confidence 



























































   68.70.........80.........90.........100.........110.........120.......
 
   180....
Predicted Secondary structure 
Query SS confidence 




Query Sequence  HGSVK
Query Conservation       
Alig confidence 




Template Conservation   
   
Template Sequence  VSALK
Template Known Secondary structure  TTTTS
Template Predicted Secondary structure 
Template SS confidence 




   128.130..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D