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Job DescriptionA1L317
Confidence90.87%DateTue Jul 30 13:02:37 BST 2013
Rank85Aligned Residues184
% Identity13%Templatec2yo3C_
PDB info PDB header:membrane proteinChain: C: PDB Molecule:general control protein gcn4, putative inner membrane PDBTitle: salmonella enterica sada 1185-1386 fused to gcn4 adaptors (sadak14)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60......
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Query Sequence  KGSCSSRVSSSGAVGSRGCTGGSSFGGGSSCGLGGGSAWGFQGSSNSWSLSGGSKGSMGG
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Template Sequence  GSTKYFKTNTDGADANAQGADSVAIGSGSIAAAENSVALGTNSVADEANTVSVGSSTQQR
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   1226...1230.........1240.........1250.........1260.........1270.........1280.....
 
   67..70 .........80.........90.........100.........110.........120.....
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Query Sequence  GFGS. CSVRGGFGAASSYGGGSGFGGSSGFGGGSGFGGGSGFGGGSSGGFSSYGGSMGCG
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Template Sequence  RITNVAAGVNNTDAVNVAQLKASEAGSVRYETNADSVNYSVLNLGDGSGGTTRIGNVSAA
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   1286...1290.........1300.........1310.........1320.........1330.........1340.....
 
   126...130.........140.........150.........160.........170.........180.....
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Query Sequence  LGGVSGYDGGLLSGSEKQTMQDLNDRLANYLDKVRALEEANTDLECKIKDWYGKHGSVKG
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Template Sequence  VNDTDAVNYAQLKRSVEEANTYTDQKMGEMNSKIKGVENKMKQIEDKIEEILSKIYHIEN
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   1347..1350.........1360.........1370.........1380.........1390.........1400......
 
   186...190
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Query Sequence  GSGRD
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Template Sequence  EIARI
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   1407..1410.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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