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Job Description | A1L317 | Confidence | 28.01% | Date | Tue Jul 30 13:02:37 BST 2013 |
Rank | 213 | Aligned Residues | 83 |
% Identity | 11% | Template | c3m5gD_ |
PDB info |
PDB header:viral protein | Chain: D: PDB Molecule:hemagglutinin; |
PDBTitle: crystal structure of a h7 influenza virus hemagglutinin
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Resolution | 2.60 Å |
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367 | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
V | Q | T | L | E | I | E | L | Q | S | Q | L | A | L | K | C | S | L | E | G | T | L | A | D | T | E | A | G | Y | V | A | Q | L | S | G | I | Q | A | Q | I | S | S | L | E | E | Q | L | S | Q | I | R | A | E | T | Q | C | Q | S | A | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Y | K | S | T | Q | S | A | I | D | Q | I | T | G | K | L | N | R | L | I | G | K | T | N | Q | Q | F | E | L | I | D | N | E | F | N | E | I | E | Q | Q | I | G | N | V | I | N | W | T | R | D | A | M | T | E | I | W | S | Y | N | A | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
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427 | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Y | E | C | L | L | N | I | K | T | R | L | E | Q | E | I | E | T | Y | R | R | L | L | N |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | L | V | A | M | E | N | Q | H | T | I | D | L | A | D | S | E | M | S | K | L | Y | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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