Return to main results Retrieve Phyre Job Id

Job DescriptionA1L317
Confidence96.11%DateTue Jul 30 13:02:37 BST 2013
Rank63Aligned Residues326
% Identity13%Templatec4hpqC_
PDB info PDB header:protein transportChain: C: PDB Molecule:atg17; PDBTitle: crystal structure of the atg17-atg31-atg29 complex
Resolution3.06 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   170.........180.........190.........200.........210.........220.........
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  ECKIKDWYGKHGSVKGGSGRDYSQYYSIIEDLKKQILSATCENARMTLQIDNARLAADDF
Query Conservation 
  
                           
   
     
   
  

  
       
Alig confidence 



























































Template Conservation 

 

    
    
   
         
      
         
      
      
Template Sequence  EAVIEKLLENSRKFLTGAKLICQESNDHLTTTKLRIREWQKFQSKLHFVLDCIQQQTKFL
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



























































   3......10.........20.........30.........40.........50.........60..
 
   230....... ..240.........250.........260
Predicted Secondary structure  .............................
Query SS confidence 







. . . . . . . . . . . . . . . .






















. . . . . . . . . . . . .
Query Sequence  RMKYEHEL. . . . . . . . . . . . . . . . CLRECLEADINGLRKVLDEMTMT. . . . . . . . . . . . .
Query Conservation      
   ................     

 

  
   
      .............
Alig confidence 







................






















.............
Template Conservation                                                              
Template Sequence  SEILLREGIGRNLIEEEWSQTVLVRLVNDMKFWQNEITKMMNKLDNITNEIDQQHNSKLG
Template Known Secondary structure 



















TTTS



SSS


TTT
Template Predicted Secondary structure 
Template SS confidence 



























































   63......70.........80.........90.........100.........110.........120..
 
   261........270.........280.........290.........300.........310...
Predicted Secondary structure  .......
Query SS confidence  . . . . . . .




















































Query Sequence  . . . . . . . RCDLEMQIEGLTEELVFLRKNHEEEMKCMQGSSGGDVTVEMNAAPGVDLTKLL
Query Conservation  .......   
      
  

  
          
                   
   
Alig confidence  .......




















































Template Conservation                                                              
Template Sequence  DFISRDSSHILDSKLNEIPTIRKQVENITRQYQTMLAKVQSQLVESRMKGLRDEFSEEFT
Template Known Secondary structure  TSS

TTTT

Template Predicted Secondary structure 
Template SS confidence 



























































   123......130.........140.........150.........160.........170.........180..
 
   314.....320.........330.........340.........350.........360.........370...
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  NDMRAQYEAMAEQNRQEAERQFNERSASLQAQISSDAGEANCARSEVMELKRTVQTLEIE
Query Conservation                                         
     
              
Alig confidence 


















...





































Template Conservation                     ...                                      
Template Sequence  NEADQLEQELADFLKSFTD. . . HFDKCSALSSRSVSPEDAQNLFEIVERDDKDLAAINSL
Template Known Secondary structure  ...TTTTS

SS
Template Predicted Secondary structure  ...
Template SS confidence 



























































   197..200.........210..... ....220.........230.........240.........250...
 
   374.....380.........390.........400.........410.........420.........430...
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  LQSQLALKCSLEGTLADTEAGYVAQLSGIQAQISSLEEQLSQIRAETQCQSAEYECLLNI
Query Conservation 
         
   
                    

 

  
  
      
   
   
Alig confidence 



























































Template Conservation                              
      
                    
   
Template Sequence  LQDAAIDVASFVRKVNMLLDERDADKAKMQATLSKLLTELRKHEEYISVFEGISALIQKF
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



























































   254.....260.........270.........280.........290.........300.........310...
 
   434.....440.........450.........460.........470.........480.........490...
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  KTRLEQEIETYRRLLNGDGGGCDYRNLVSKNVVLSDSGSCAGQGKDPSKTRVTKTIIEEV
Query Conservation     

 


  
  

 
                                       

 
Alig confidence 



























































Template Conservation               
             
  
          
   
      
  
    
Template Sequence  KASCLEDIRQTRNLLDFYANFERSYHNLLKEVKRRKETAAKLSQILKSCETQLEQINTAD
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



























































   314.....320.........330.........340.........350.........360.........370...
 
   494....
Predicted Secondary structure 
Query SS confidence 




Query Sequence  VDGRV
Query Conservation       
Alig confidence 




Template Conservation       
Template Sequence  LRERQ
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




   374....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D