Return to main results Retrieve Phyre Job Id

Job DescriptionA1L317
Confidence65.83%DateTue Jul 30 13:02:37 BST 2013
Rank128Aligned Residues216
% Identity9%Templatec3i2wB_
PDB info PDB header:endocytosisChain: B: PDB Molecule:syndapin; PDBTitle: crystal structure of efc/f-bar domain of drosophila2 syndapin/pacsin
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   233......240.........250.........260.........270.........280.........290..
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  YEHELCLRECLEADINGLRKVLDEMTMTRCDLEMQIEGLTEELVFLRKNHEEEMKCMQGS
Query Conservation   
        

 

  
   
         
      
  

  
          
   
Alig confidence 



























































Template Conservation        
          
     


 

  


 
 

               
     
Template Sequence  YKRTTKRIEDGYKLCNDLQQLIQERADIEKGYAKSLRTWSKKWGELIEKGPEYGTTEAAW
Template Known Secondary structure  TSS

Template Predicted Secondary structure 








Template SS confidence 



























































   23......30.........40.........50.........60.........70.........80..
 
   293......300.........310.........320.........330.........340.........350..
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  SGGDVTVEMNAAPGVDLTKLLNDMRAQYEAMAEQNRQEAERQFNERSASLQAQISSDAGE
Query Conservation                  
   
                                       
Alig confidence 



























































Template Conservation    
       
  
      
   
   
                  
            
Template Sequence  KGVLTESERISDVHXKIKDNLCNDVNSQIKTWQKENYHHTLXQIKERKDLEDLFKKAQKP
Template Known Secondary structure  T

TT
Template Predicted Secondary structure 
Template SS confidence 



























































   83......90.........100.........110.........120.........130.........140..
 
   353......360.........370.........380...... ...390.........400.....
Predicted Secondary structure  .......
Query SS confidence 

































. . . . . . .


















Query Sequence  ANCARSEVMELKRTVQTLEIELQSQLALKCSLEG. . . . . . . TLADTEAGYVAQLSGIQAQ
Query Conservation 
     
              
         
  ....... 
                 
Alig confidence 

































.......


















Template Conservation 
        
 
  
     
 
                     
   
          
Template Sequence  WAKLLAKVEKAKADYHSACKTERSATNQERNANADSSLSPDQVKKXHDRVQKTKDQVQKC
Template Known Secondary structure  TTTT
TTS
Template Predicted Secondary structure 





Template SS confidence 



























































   143......150.........160.........170.........180.........190.........200..
 
   406...410.........420.........430.........440 ........
Predicted Secondary structure  .
Query SS confidence 


































.







Query Sequence  ISSLEEQLSQIRAETQCQSAEYECLLNIKTRLEQE. IETYRRLL
Query Conservation     

 

  
  
      
   
      

 
.

  
  
Alig confidence 


































.







Template Conservation     
   
   
     
           
  
  
    
  
Template Sequence  REKYEQAIAEITKYNSVYIEDXTSVFEKCQTFEKTRLQFFKEIL
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 











































   203......210.........220.........230.........240......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D