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Job DescriptionA1L317
Confidence88.90%DateTue Jul 30 13:02:37 BST 2013
Rank90Aligned Residues131
% Identity10%Templatec2qihA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:protein uspa1; PDBTitle: crystal structure of 527-665 fragment of uspa1 protein from2 moraxella catarrhalis
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   145....150.........160.........170.........180.........190.........200....
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Query Sequence  MQDLNDRLANYLDKVRALEEANTDLECKIKDWYGKHGSVKGGSGRDYSQYYSIIEDLKKQ
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Template Sequence  IATAELGIAENKKDAQIAKAQANENKDGIAKNQADIQL. . . . HDKKITNLGILHSMVARA
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   535....540.........550.........560.........570.. .......580.........590
 
   205....210.........220.........230.........240.........250.........260....
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Query Sequence  ILSATCENARMTLQIDNARLAADDFRMKYEHELCLRECLEADINGLRKVLDEMTMTRCDL
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Template Sequence  VGNNTQGVATNKADIAKNQADIANNIKNIYELAQQQDQHSSDIKTLAKVSAANTDRIAKN
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   591........600.........610.........620.........630.........640.........650
 
   265....270.........
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Query Sequence  EMQIEGLTEELVFLR
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Template Sequence  KAEADASFETLTKNQ
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   651........660.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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