Return to main results Retrieve Phyre Job Id

Job DescriptionA1L317
Confidence40.49%DateTue Jul 30 13:02:37 BST 2013
Rank184Aligned Residues200
% Identity9%Templatec4avmA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:bridging integrator 2; PDBTitle: crystal structure of the n-bar domain of human bridging2 integrator 2.
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   259260.........270.........280.........290.........300.........310........
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  MTRCDLEMQIEGLTEELVFLRKNHEEEMKCMQGSSGGDVTVEMNAAPGVDLTKLLNDMRA
Query Conservation       
      
  

  
          
                   
   
     
Alig confidence 



























































Template Conservation    
      
         
 
                  
   
               
Template Sequence  ERFEQSASNFYQQQAEGHKLYKDLKNFLSAVKVMHESSKRVSETLQEIYSSEWDGHEELK
Template Known Secondary structure  S
TTSTT
Template Predicted Secondary structure 





Template SS confidence 



























































   41........50.........60.........70.........80.........90.........100
 
   319320.........330.........340.........350.........360.........370........
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  QYEAMAEQNRQEAERQFNERSASLQAQISSDAGEANCARSEVMELKRTVQTLEIELQSQL
Query Conservation                                    
     
              
    
Alig confidence 



























































Template Conservation                  
   
  

  
          



    



    

 

 
Template Sequence  AIVWNNDLLWEDYEEKLADQAVRTMEIYVAQFSEIKERIAKRGRKLVDYDSARHHLEAVQ
Template Known Secondary structure  TT
Template Predicted Secondary structure 
Template SS confidence 



























































   101........110.........120.........130.........140.........150.........160
 
   379380.........390.........400.........410...... ...420.........430.......
Predicted Secondary structure  .
Query SS confidence 





































.




















Query Sequence  ALKCSLEGTLADTEAGYVAQLSGIQAQISSLEEQLSQI. RAETQCQSAEYECLLNIKTRL
Query Conservation       
   
                    

 

  
.  
      
   
      
Alig confidence 





































.




















Template Conservation   
  
   
    
     
   

     
  

  
           
      
   
Template Sequence  NAKKKDEAKTAKAEEEFNKAQTVFEDLNQELLEELPILYNSRIGCYVTIFQNISNLRDVF
Template Known Secondary structure  T
SS

T
Template Predicted Secondary structure 




Template SS confidence 



























































   161........170.........180.........190.........200.........210.........220
 
   438.440.........450........
Predicted Secondary structure 
Query SS confidence 




















Query Sequence  EQEIETYRRLLNGDGGGCDYR
Query Conservation 
 


  
  

 
       
Alig confidence 




















Template Conservation            
   
      
Template Sequence  YREMSKLNHNLYEVMSKLEKQ
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




















   221........230.........240.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D