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Job Description | A1L317 | Confidence | 81.93% | Date | Tue Jul 30 13:02:37 BST 2013 |
Rank | 108 | Aligned Residues | 80 |
% Identity | 15% | Template | c2zvnF_ |
PDB info |
PDB header:signaling protein/transcription | Chain: F: PDB Molecule:nf-kappa-b essential modulator; |
PDBTitle: nemo cozi domain incomplex with diubiquitin in p2121212 space group
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Resolution | 3.00 Å |
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185 | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | G | S | G | R | D | Y | S | Q | Y | Y | S | I | I | E | D | L | K | K | Q | I | L | S | A | T | C | E | N | A | R | M | T | . |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | D | L | R | Q | Q | L | Q | Q | A | E | E | A | L | V | A | K | Q | E | L | I | D | K | L | K | E | E | A | E | Q | H | K | I | V | M | E | T | V | P | V | L | K | A | Q | A | D | I | Y | K | A | D | F | Q | A | E | R | H | A | R | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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254 | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . |
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242 | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
C | L | E | A | D | I | N | G | L | R | K | V | L | D | E | M | T | M | T | R | C | D | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | L | V | E | K | K | E | Y | L | Q | E | Q | L | E | Q | L | Q | R | E | F | N | K | L |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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314 | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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