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Job DescriptionA1L317
Confidence98.05%DateTue Jul 30 13:02:37 BST 2013
Rank31Aligned Residues167
% Identity9%Templatec3vkgB_
PDB info PDB header:motor proteinChain: B: PDB Molecule:dynein heavy chain, cytoplasmic; PDBTitle: x-ray structure of an mtbd truncation mutant of dynein motor domain
Resolution2.81 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   140.........150.........160.........170.........180.........190.........
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Query Sequence  SEKQTMQDLNDRLANYLDKVRALEEANTDLECKIKDWYGKHGSVKGGSGRDYSQYYSIIE
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Template Sequence  EKRDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQ
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   3273......3280.........3290.........3300.........3310.........3320.........3330..
 
   200.........210.........220. ........230.........240.........250...
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Query Sequence  DLKKQILSATCENARMTLQIDN. . . . . . ARLAADDFRMKYEHELCLRECLEADINGLRKV
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Template Sequence  AAEIKQKDARELQVQLDVRNKEIAVQEQLENAANELKLKQDEIVATITALEKSIATYKEE
Template Known Secondary structure  TT


TTTT
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   3333......3340.........3350.........3360.........3370.........3380.........3390..
 
   254.....260.........270.........280.........290.........300......
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Query Sequence  LDEMTMTRCDLEMQIEGLTEELVFLRKNHEEEMKCMQGSSGGDVTVEMNAAPG
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Template Sequence  YATLIRETEQIKTESSKVKNKVDRSIALLDNLNSERGRWEQQSENFNTQMSTV
Template Known Secondary structure  TTTTTT
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   3536...3540.........3550.........3560.........3570.........3580........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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