Return to main results Retrieve Phyre Job Id

Job DescriptionA1L317
Confidence73.80%DateTue Jul 30 13:02:37 BST 2013
Rank120Aligned Residues79
% Identity16%Templatec1ik9B_
PDB info PDB header:gene regulation/ligaseChain: B: PDB Molecule:dna repair protein xrcc4; PDBTitle: crystal structure of a xrcc4-dna ligase iv complex
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   192.......200.........210.........220.........230.........240...... ...250
Predicted Secondary structure  .
Query SS confidence 






















































.



Query Sequence  SQYYSIIEDLKKQILSATCENARMTLQIDNARLAADDFRMKYEHELCLRECLEAD. INGL
Query Conservation           
   
     
   
  

  
           
        

 
.
  
Alig confidence 






















































.



Template Conservation    
 
 
         
      
      
      
  


  
  
 
 
  
  

Template Sequence  EVIRELIAYALDTIAENQAKNEHLQKENERLLRDWNDVQGRFEKAVSAKEALETDLYKRF
Template Known Secondary structure  TT
Template Predicted Secondary structure 
Template SS confidence 



























































   121........130.........140.........150.........160.........170.........180
 
   251........260.........270
Predicted Secondary structure 
Query SS confidence 



















Query Sequence  RKVLDEMTMTRCDLEMQIEG
Query Conservation     
         
      
Alig confidence 



















Template Conservation    





 


 
   
  
Template Sequence  ILVLNEKKTKIRSLHNKLLN
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



















   181........190.........200
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D