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Job DescriptionA1L317
Confidence20.42%DateTue Jul 30 13:02:37 BST 2013
Rank235Aligned Residues216
% Identity9%Templatec3lllA_
PDB info PDB header:endocytosisChain: A: PDB Molecule:protein kinase c and casein kinase substrate in neurons PDBTitle: crystal structure of mouse pacsin2 f-bar domain
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   233......240.........250.........260.........270.........280.........290..
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Query Sequence  YEHELCLRECLEADINGLRKVLDEMTMTRCDLEMQIEGLTEELVFLRKNHEEEMKCMQGS
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Template Sequence  YKRTVKRIDDGHRLCGDLMNCLHERARIEKAYAQQLTEWARRWRQLVEKGPQYGTVEKAW
Template Known Secondary structure  TTSS

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   25....30.........40.........50.........60.........70.........80....
 
   293......300.........310.........320.........330. ........340....
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Query Sequence  SGGDVTVEMNAAPGVDLTKLLNDMRAQYEAMAEQNRQEA. . . . . . . . ERQFNERSASLQA
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Template Sequence  IAVMSEAERVSELHLEVKASLMNEDFEKIKNWQKEAFHKQMMGGFKETKEAEDGFRKAQK
Template Known Secondary structure  TTT

B
SSSSBTT
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   85....90.........100.........110.........120.........130.........140....
 
   345....350.........360.........370.........380.........390.........400....
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Query Sequence  QISSDAGEANCARSEVMELKRTVQTLEIELQSQLALKCSLEGTLADTEAGYVAQLSGIQA
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Template Sequence  PWAKKLKEVEAAKKAHHTACKEEKLAISREANSKADPSLNPEQLKKLQDKIEKCKQDVLK
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GGGTTTT
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   145....150.........160.........170.........180.........190.........200....
 
   405....410.........420.........430.........440 ........
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Query Sequence  QISSLEEQLSQIRAETQCQSAEYECLLNIKTRLEQE. IETYRRLL
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Template Sequence  TKDKYEKSLKELDQTTPQYMENMEQVFEQCQQFEEKRLRFFREVL
Template Known Secondary structure  TTS
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   205....210.........220.........230.........240.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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