Return to main results Retrieve Phyre Job Id

Job DescriptionA1L317
Confidence98.02%DateTue Jul 30 13:02:37 BST 2013
Rank32Aligned Residues184
% Identity16%Templatec3na7A_
PDB info PDB header:gene regulation, chaperoneChain: A: PDB Molecule:hp0958; PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   202.......210.........220.........230.........240.........250.........260.
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  KKQILSATCENARMTLQIDNARLAADDFRMKYEHELCLRECLEADINGLRKVLDEMTMTR
Query Conservation     
     
   
  

  
           
        

 

  
   
       
Alig confidence 






.



















































Template Conservation 

 
  
. 

  
  

  
      
   
  
      
             
    
Template Sequence  NTHLKQL. IEISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQV
Template Known Secondary structure  .T
Template Predicted Secondary structure  .
Template SS confidence 



























































   2...... .10.........20.........30.........40.........50.........60
 
   262.......270.........280.........290.........300.........310.........320.
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  CDLEMQIEGLTEELVFLRKNHEEEMKCMQGSSGGDVTVEMNAAPGVDLTKLLNDMRAQYE
Query Conservation    
      
  

  
          
                   
   
        
Alig confidence 






















.....................................
Template Conservation                         .....................................
Template Sequence  SKNEQTLQDTNAKIASIQKKMSE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  .....................................
Template Predicted Secondary structure  .....................................
Template SS confidence 



























































   61........70.........80...
 
   322.......330.........340.........350.........360.........370.........380.
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  AMAEQNRQEAERQFNERSASLQAQISSDAGEANCARSEVMELKRTVQTLEIELQSQLALK
Query Conservation                                 
     
              
       
Alig confidence  ...........
















































Template Conservation  ...........                              
             
    
Template Sequence  . . . . . . . . . . . IKSERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEM
Template Known Secondary structure  ...........
SSSS
Template Predicted Secondary structure  ...........
Template SS confidence 



























































   84.....90.........100.........110.........120.........130..
 
   382.......390.........400.........410.........420. ........430....
Predicted Secondary structure  .
Query SS confidence 







































.












Query Sequence  CSLEGTLADTEAGYVAQLSGIQAQISSLEEQLSQIRAETQ. CQSAEYECLLNIK
Query Conservation    
   
                    

 

  
  
  .    
   
    
Alig confidence 







































.












Template Conservation        
      
      
      
     

   
   
    
 


  
Template Sequence  LELEKLALELESLVENEVKNIKETQQIIFKKKEDLVEKTEPKIYSFYERIRRWA
Template Known Secondary structure  TS
Template Predicted Secondary structure 
Template SS confidence 





















































   133......140.........150.........160.........170.........180......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D