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Job DescriptionA1L317
Confidence48.03%DateTue Jul 30 13:02:37 BST 2013
Rank166Aligned Residues214
% Identity7%Templatec3k8vB_
PDB info PDB header:structural proteinChain: B: PDB Molecule:flagellin homolog; PDBTitle: crysatl structure of a bacterial cell-surface flagellin n20c20
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60
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Query Sequence  MFCSAQKGSCSSRVSSSGAVGSRGCTGGSSFGGGSSCGLGGGSAWGFQGSSNSWSLSGGS
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Template Sequence  LLDGSFNGVQFQIGANAGETIGVSKIMNAQTASLGGSLTRTTSTIDATDLTKYDTAMAAG
Template Known Secondary structure 
SBS




SSSTT




B
STTTTT
GGG
TTTTS
B
TT
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   137..140.........150.........160.........170.........180.........190......
 
   61........70........ .80.........90.........100........
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Query Sequence  KGSMGGGFGSCSVRGGFG. . . . . . . . . . . . AASSYGGGSGFGGSSGFGGGSGFGGGSGFG
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Template Conservation                                                              
Template Sequence  DLTINGVDVGKIDAASTAQERAAQLTEAINRVSSQTNVGASYDKTTGQVTLTSNAAIAVA
Template Known Secondary structure  S
TT


B


SSTSTTTTSS
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   197..200.........210.........220.........230.........240.........250......
 
   109110.........120.........130.........140.........150.........160........
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Query Sequence  GGSSGGFSSYGGSMGCGLGGVSGYDGGLLSGSEKQTMQDLNDRLANYLDKVRALEEANTD
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Template Sequence  GAANDATVAGWANNATTGTATTTTGINSLTVSSFTNAQQTITQIDNALKDINTARADLGA
Template Known Secondary structure  SS


SS
SSSSTT


SS
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   257..260.........270.........280.........290.........300.........310......
 
   169170.........180.........190.........200.........210......
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Query Sequence  LECKIKDWYGKHGSVKGGSGRDYSQYYSIIEDLKKQILSATCENARMT
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Template Sequence  VQNRFTSTVANLQSMTENLSSARGRVTD. . ADFASETANLSRAQILQQ
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   317..320.........330.........340.... .....350.........360..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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