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Job DescriptionA1L317
Confidence22.08%DateTue Jul 30 13:02:37 BST 2013
Rank226Aligned Residues189
% Identity8%Templatec3fb2B_
PDB info PDB header:structural proteinChain: B: PDB Molecule:spectrin alpha chain, brain spectrin; PDBTitle: crystal structure of the human brain alpha spectrin repeats2 15 and 16. northeast structural genomics consortium target3 hr5563a.
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   204.....210.........220......... 230.........240.........250........
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Query Sequence  QILSATCENARMTLQIDNARLAADDF. . . . . RMKYEHELCLRECLEADINGLRKVLDEMT
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Template Sequence  DLQRFLSDFRDLXSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFE
Template Known Secondary structure  T




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   1340.........1350.........1360.........1370.........1380.........1390.........
 
   259260.........270.........280.........290.........300.........310........
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Query Sequence  MTRCDLEMQIEGLTEELVFLRKNHEEEMKCMQGSSGGDVTVEMNAAPGVDLTKLLNDMRA
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Template Sequence  QFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRXXLDQCLELQLFHRDCEQAEN
Template Known Secondary structure  TT
TT
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   1400.........1410.........1420.........1430.........1440.........1450.........
 
   319320.........330.........340.........350.........360.........370........
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Query Sequence  QYEAMAEQNRQEAERQFNERSASLQAQISSDAGEANCARSEVMELKRTVQTLEIELQSQL
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Template Sequence  WXAAREAFLDS. . . . . . . . . . . . . . . . VEALIKKHEDFDKAINVQEEKIAALQAFADQLI
Template Known Secondary structure  TT


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   1460.........1470 .........1480.........1490.........1500...
 
   379380.........390.........400........
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Query Sequence  ALKCSLEGTLADTEAGYVAQLSGIQAQISS
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Template Sequence  AAGHYAKGDISSRRNEVLDRWRRLKAQXIE
Template Known Secondary structure  TT
TTT
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   1513......1520.........1530.........1540..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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