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Job DescriptionA1L317
Confidence46.25%DateTue Jul 30 13:02:37 BST 2013
Rank169Aligned Residues201
% Identity7%Templatec1s35A_
PDB info PDB header:structural proteinChain: A: PDB Molecule:spectrin beta chain, erythrocyte; PDBTitle: crystal structure of repeats 8 and 9 of human erythroid2 spectrin
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   221........230.........240... ......250.........260.........270.....
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Query Sequence  NARLAADDFRMKYEHELCLRECL. . . . . EADINGLRKVLDEMTMTRCDLEMQIEGLTEEL
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Template Sequence  AFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESG
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   1065....1070.........1080.........1090.........1100.........1110.........1120....
 
   276...280... ......290.........300.........310.........320.........330....
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Query Sequence  VFLRKNHE. EEMKCMQGSSGGDVTVEMNAAPGVDLTKLLNDMRAQYEAMAEQNRQEAERQ
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Template Sequence  EKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAIL
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   1125....1130.........1140.........1150.........1160.........1170.........1180....
 
   335....340.........350.........360.........370.........380.........390....
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Query Sequence  FNERSASLQAQISSDAGEANCARSEVMELKRTVQTLEIELQSQLALKCSLEGTLADTEAG
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Template Sequence  SNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSDK
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TT
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   1185....1190.........1200.........1210.........1220.........1230.........1240....
 
   395....400.........410.........420.
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Query Sequence  YVAQLSGIQAQISSLEEQLSQIRAETQ
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Template Sequence  IKEKVQLIEDRHRKNNEKAQEASVLLR
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   1245....1250.........1260.........1270.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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