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Job DescriptionA1L317
Confidence88.72%DateTue Jul 30 13:02:37 BST 2013
Rank91Aligned Residues204
% Identity10%Templatec1u5pA_
PDB info PDB header:structural proteinChain: A: PDB Molecule:spectrin alpha chain, brain; PDBTitle: crystal structure of repeats 15 and 16 of chicken brain2 alpha spectrin
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   218.220.........230.........240.... .....250.........260.........270..
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Query Sequence  QIDNARLAADDFRMKYEHELCLRECLE. . . . . ADINGLRKVLDEMTMTRCDLEMQIEGLT
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Template Sequence  KQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLN
Template Known Secondary structure  T




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   1664.....1670.........1680.........1690.........1700.........1710.........1720...
 
   273......280.........290.........300.........310.........320.........330..
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Query Sequence  EELVFLRKNHEEEMKCMQGSSGGDVTVEMNAAPGVDLTKLLNDMRAQYEAMAEQNRQEAE
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Template Sequence  SQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEES
Template Known Secondary structure  T
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   1724.....1730.........1740.........1750.........1760.........1770.........1780...
 
   333......340.........350.........360.........370.........380.........390..
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Query Sequence  RQFNERSASLQAQISSDAGEANCARSEVMELKRTVQTLEIELQSQLALKCSLEGTLADTE
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Template Sequence  WIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGK
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   1784.....1790.........1800.........1810.........1820.........1830.........1840...
 
   393......400.........410.........420.
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Query Sequence  AGYVAQLSGIQAQISSLEEQLSQIRAETQ
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Template Sequence  EEIQQRLAQFVDHWKELKQLAAARGQRLE
Template Known Secondary structure  T
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   1844.....1850.........1860.........1870..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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