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Job DescriptionA1L317
Confidence72.84%DateTue Jul 30 13:02:37 BST 2013
Rank121Aligned Residues204
% Identity11%Templatec1cunC_
PDB info PDB header:structural proteinChain: C: PDB Molecule:protein (alpha spectrin); PDBTitle: crystal structure of repeats 16 and 17 of chicken brain2 alpha spectrin
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   219220.........230.........240.. .......250.........260.........270...
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Query Sequence  IDNARLAADDFRMKYEHELCLREC. . . . . LEADINGLRKVLDEMTMTRCDLEMQIEGLTE
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Template Sequence  VHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLD
Template Known Secondary structure  TT




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   8.10.........20.........30.........40.........50.........60.......
 
   274.....280.........290.........300.........310.........320.........330...
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Query Sequence  ELVFLRKNHEEEMKCMQGSSGGDVTVEMNAAPGVDLTKLLNDMRAQYEAMAEQNRQEAER
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Template Sequence  TGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAW
Template Known Secondary structure  TT
TT
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   68.70.........80.........90.........100.........110.........120.......
 
   334.....340.........350.........360.........370.........380.........390...
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Query Sequence  QFNERSASLQAQISSDAGEANCARSEVMELKRTVQTLEIELQSQLALKCSLEGTLADTEA
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Template Sequence  INEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVE
Template Known Secondary structure  T




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TT
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   128.130.........140.........150.........160.........170.........180.......
 
   394.....400.........410.........420..
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Query Sequence  GYVAQLSGIQAQISSLEEQLSQIRAETQC
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Template Sequence  NITAKMKGLKGKVSDLEKAAAQRKAKLDE
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   188.190.........200.........210......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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