Return to main results Retrieve Phyre Job Id

Job DescriptionA1L317
Confidence96.38%DateTue Jul 30 13:02:37 BST 2013
Rank60Aligned Residues252
% Identity11%Templatec3r6nA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:desmoplakin; PDBTitle: crystal structure of a rigid four spectrin repeat fragment of the2 human desmoplakin plakin domain
Resolution2.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   215....220.........230...... ...240.........250.........260.........
Predicted Secondary structure  .....
Query SS confidence 





















. . . . .
































Query Sequence  MTLQIDNARLAADDFRMKYEHE. . . . . LCLRECLEADINGLRKVLDEMTMTRCDLEMQIE
Query Conservation 
  

  
           
  .....      

 

  
   
         
     
Alig confidence 





















.....
































Template Conservation      
 

  

 
    
       
    
  
     
   
      
  
     
Template Sequence  TKHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKADLR
Template Known Secondary structure  TTS







Template Predicted Secondary structure 






Template SS confidence 



























































   184.....190.........200.........210.........220.........230.........240...
 
   270.........280.........290.........300.........310.........320.........
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  GLTEELVFLRKNHEEEMKCMQGSSGGDVTVEMNAAPGVDLTKLLNDMRAQYEAMAEQNRQ
Query Conservation   
  

  
          
                   
   
                
Alig confidence 


.























































Template Conservation     .    
      
          
                                 
Template Sequence  EKS. AIYQLEEEYENLLKASFERMDHLRQLQNIIQATSREIMWINDCEEEELLYDWSDKN
Template Known Secondary structure 
.S


STT
Template Predicted Secondary structure  .



Template SS confidence 



























































   244.. ...250.........260.........270.........280.........290.........300..
 
   330.........340.........350.........360.........370.........380.........
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  EAERQFNERSASLQAQISSDAGEANCARSEVMELKRTVQTLEIELQSQLALKCSLEGTLA
Query Conservation                         
     
              
         
   
 
Alig confidence 



























































Template Conservation              
  
                 
                 
        
Template Sequence  TNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPASDKIEAYMDTLQTQWSWIL
Template Known Secondary structure 

TTTT
TT
Template Predicted Secondary structure 


Template SS confidence 



























































   303......310.........320.........330.........340.........350.........360..
 
   390.........400.........410.........420.........430.........440.........
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  DTEAGYVAQLSGIQAQISSLEEQLSQIRAETQCQSAEYECLLNIKTRLEQEIETYRRLLN
Query Conservation                     

 

  
  
      
   
      

 


  
  

Alig confidence 



























































Template Conservation                                                              
Template Sequence  QITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRKKYPCDKNMPLQHLLEQIKELE
Template Known Secondary structure  S


TT

Template Predicted Secondary structure 
Template SS confidence 



























































   363......370.........380.........390.........400.........410.........420..
 
   450.........460.......
Predicted Secondary structure 
Query SS confidence 

















Query Sequence  GDGGGCDYRNLVSKNVVL
Query Conservation   
                
Alig confidence 

















Template Conservation                 
  
Template Sequence  KEREKILEYKRQVQNLVN
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

















   423......430.........440
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D