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Job DescriptionA1L317
Confidence21.96%DateTue Jul 30 13:02:37 BST 2013
Rank228Aligned Residues128
% Identity9%Templatec1tcmB_
PDB info PDB header:glycosyltransferaseChain: B: PDB Molecule:cyclodextrin glycosyltransferase; PDBTitle: cyclodextrin glycosyltransferase w616a mutant from bacillus2 circulans strain 251
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60...
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Query Sequence  SAQKGSCSSRVSSSGAVGSRGCTGGSSFGGGSSCGLGGGSAWGFQGSSNSWSLSGGSKGS
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Template Conservation         
 
   
     
           
             
              
Template Sequence  GFGSSKGTVYFGTTAVSGADITSWEDTQIKVKIPAVAGGNYNIKVANAAGTASNVYDNFE
Template Known Secondary structure 


SS

TT
GGG


SS


S

S
TTS
B


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   521........530.........540.........550.........560.........570.........580
 
   64.....70.........80.........90.........100.........110.........120...
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Query Sequence  MGGGFGSCSVRGGFGAASSYGGGSGFGGSSGFGGGSGFGGGSGFGGGSSGGFSSYGGSMG
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Template Conservation           
       
  
 

   

               
         
 
 
 
Template Sequence  VLSGDQVSVRFVVNNATTALGQNVYLTGSVSELGNADPAKAIGPMYNQVVYQYPNWYYDV
Template Known Secondary structure 
SSSS



TT
SSTTTTTT
TTS
B


B
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SS
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   581........590.........600.........610.........620.........630.........640
 
   124.....130.
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Query Sequence  CGLGGVSG
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Template Conservation 
  
    
Template Sequence  SVPAGKTI
Template Known Secondary structure  TT
Template Predicted Secondary structure 




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   641.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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