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Job DescriptionA1L317
Confidence94.05%DateTue Jul 30 13:02:37 BST 2013
Rank70Aligned Residues222
% Identity11%Templatec2nrjA_
PDB info PDB header:toxinChain: A: PDB Molecule:hbl b protein; PDBTitle: crystal structure of hemolysin binding component from2 bacillus cereus
Resolution2.03 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   142.......150.........160......... 170.........180.........190.........
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Query Sequence  KQTMQDLNDRLANYLDKVRALEEANTDL. . ECKIKDWYGKHGSVKGGSGRDYSQYYSIIE
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Template Sequence  KKQLLDTLNGIVEYDTTFDNYYETXVEAINTGDGETLKEGITDLRGEIQQNQKYAQQLIE
Template Known Secondary structure  T
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   85....90.........100.........110.........120.........130.........140....
 
   200.........210.........220.........230.........240........
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Query Sequence  DLKKQILSATCENARMTLQIDNARLAADDFRMKYEHELCLRECLEADIN. . . . . . . . . . .
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Template Sequence  ELTKLRDSIGHDVRAFGSNKELLQSILKNQGADVDADQKRLEEVLGSVNYYKQLEGFNVX
Template Known Secondary structure  TT

TGGG
GGG




GGG
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   145....150.........160.........170.........180.........190.........200....
 
   249250.........260.........270.........280.........290..
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Query Sequence  . . . . . . . . . . . . . . . . GLRKVLDEMTMTRCDLEMQIEGLTEELVFLRKNHEEEMKCMQGS
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Template Sequence  KGAILGLPIIGGIIVGVARDNLGKLEPLLAELRQTVDYKVTLNRVVGVAYSNINEXHKAL
Template Known Secondary structure  TS
TTTGGGS


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   207..210.........220.........230.........240.........250.........260......
 
   293......300.........310.........320.........330.........340.........350..
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Query Sequence  SGGDVTVEMNAAPGVDLTKLLNDMRAQYEAMAEQNRQEAERQFNERSASLQAQISSDAGE
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Template Sequence  DDAINALTYXSTQWHDLDSQYSGVLGHIENAAQKADQNKFKFLKPNLNAAKDSWKTLRTD
Template Known Secondary structure  TT

STTTTGGG
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   267..270.........280.........290.........300.........310.........320......
 
   353......360...
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Query Sequence  ANCARSEVMEL
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Template Sequence  AVTLKEGIKEL
Template Known Secondary structure  T
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   327..330.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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