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Job DescriptionA1L317
Confidence88.71%DateTue Jul 30 13:02:37 BST 2013
Rank92Aligned Residues109
% Identity15%Templatec2e7sM_
PDB info PDB header:endocytosis/exocytosisChain: M: PDB Molecule:rab guanine nucleotide exchange factor sec2; PDBTitle: crystal structure of the yeast sec2p gef domain
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   169170.........180.........190.........200.........210.........220........
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Query Sequence  LECKIKDWYGKHGSVKGGSGRDYSQYYSIIEDLKKQILSATCENARMTLQIDNARLAADD
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Template Sequence  LEEQLNKSLKTIASQKAAIE. . . . . . . . NYNQLKEDYNTLKRELSDRDDEVKRLREDIAK
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Query Sequence  FRMKYEHELCLRECLEADINGLRKVL. DEMTMTRCDLEMQIEGLTEELVFLRKNHEEE
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Template Sequence  ENELRTKAEEEADKLNKEVEDLTASLFDEANNLVADARXEKYAIEILNKRLTEQLREK
Template Known Secondary structure  TTTTTTTTTGGGTTTTT
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   83......90.........100.........110.........120.........130.........140
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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