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Job DescriptionA1L317
Confidence82.29%DateTue Jul 30 13:02:37 BST 2013
Rank106Aligned Residues214
% Identity8%Templatec2odvA_
PDB info PDB header:structural proteinChain: A: PDB Molecule:plectin 1; PDBTitle: crystal structure of a fragment of the plakin domain of plectin, cys2 to ala mutant.
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   147..150.........160.........170.........180.........190.........200......
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Query Sequence  DLNDRLANYLDKVRALEEANTDLECKIKDWYGKHGSVKGGSGRDYSQYYSIIEDLKKQIL
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Template Sequence  ELQLRWQEYRELVLLLLQWMRHHTAAFEERFPSSFEEIEILWSQFLKFKEMELPAKEADK
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SST
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   303......310.........320.........330.........340.........350.........360..
 
   207..210.........220.........230.........240.........250.........260......
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Query Sequence  SATCENARMTLQIDNARLAADDFRMKYEHELCLRECLEADINGLRKVLDEMTMTRCDLEM
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Template Sequence  NRSKGIYQSLEGAVQAGQLKVPPGYHPLDVEKEWGKLHVAILEREKQLRSEFERLEALQR
Template Known Secondary structure  TTSS


TT
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   364.....370.........380.........390.........400.........410.........420...
 
   267..270.........280.........290.........300.........310.........320......
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Query Sequence  QIEGLTEELVFLRKNHEEEMKCMQGSSGGDVTVEMNAAPGVDLTKLLNDMRAQYEAMAEQ
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Template Sequence  IVTKLQMEAGLAEEQLNQADALLQSDV. RLLAAGKVPQRAGEVERDLDKADSMIRLLFND
Template Known Secondary structure  .TTTT


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   424.....430.........440.........450 .........460.........470.........480..
 
   327..330.........340.........350.........360..
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Query Sequence  NRQEAERQFNERSASLQAQISSDAGEANCARSEVME
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Template Sequence  VQTLKDGRHPQG. EQMYRRVYRLHKRLVAIRTEYNL
Template Known Secondary structure  TT
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   483......490.... .....500.........510.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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