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Job DescriptionA1L317
Confidence45.90%DateTue Jul 30 13:02:37 BST 2013
Rank171Aligned Residues91
% Identity10%Templatec3onjA_
PDB info PDB header:protein transportChain: A: PDB Molecule:t-snare vti1; PDBTitle: crystal structure of yeast vti1p_habc domain
Resolution1.92 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   374.....380.........390.........400. ........410.........420.........430
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Query Sequence  LQSQLALKCSLEGTLADTEAGYVAQLSG. IQAQISSLEEQLSQIRAETQCQSAEYECL. .
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Template Sequence  LISYESDFKTTLEQAKASLAEAPSQPLSQRNTTLKHVEQQQDELFDLLDQMDVEVNNSIG
Template Known Secondary structure  GGGS


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   5....10.........20.........30.........40.........50.........60....
 
   431........440.........450.........460....
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Query Sequence  . LNIKTRLEQEIETYRRLLNGDGGGCDYRNLVSKN
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Template Sequence  DASERATYKAKLREWKKTIQSDIKRPLQSLVDSGD
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   65....70.........80.........90.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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