Return to main results Retrieve Phyre Job Id

Job DescriptionA1L317
Confidence98.10%DateTue Jul 30 13:02:37 BST 2013
Rank28Aligned Residues304
% Identity7%Templatec1jchC_
PDB info PDB header:ribosome inhibitor, hydrolaseChain: C: PDB Molecule:colicin e3; PDBTitle: crystal structure of colicin e3 in complex with its immunity protein
Resolution3.02 Å
Model Dimensions (Å)X:105.080 Y:67.712 Z:84.721

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.
Predicted Secondary structure 



























































Query SS confidence 



























































Query Sequence  FCSAQKGSCSSRVSSSGAVGSRGCTGGSSFGGGSSCGLGGGSAWGFQGSSNSWSLSGGSK
Query Conservation        
         
             
             
               
Alig confidence 



























































Template Conservation           
                         
                        
Template Sequence  LPADDITESPVSSLPLDKATVNVNVRVVDDVKDERQNISVVSGVPMSVPVVDAKPTERPG
Template Known Secondary structure 
SS




TT


S
B




SSSS
B
B
SSS

B





SSSS



Template Predicted Secondary structure 













































Template SS confidence 



























































   159160.........170.........180.........190.........200.........210........
 
   62.......70.........80.........90.........100.........110.........120.
Predicted Secondary structure 



























































Query SS confidence 



























































Query Sequence  GSMGGGFGSCSVRGGFGAASSYGGGSGFGGSSGFGGGSGFGGGSGFGGGSSGGFSSYGGS
Query Conservation                                                              
Alig confidence 



























































Template Conservation             
        
                              
        
Template Sequence  VFTASIPGAPVLNISVNNSTPAVQTLSPGVTNNTDKDVRPAFGTQGGNTRDAVIRFPKDS
Template Known Secondary structure 

TTS


B


BSS




SSS
TT









S
SSTTS








SSS
Template Predicted Secondary structure 










































Template SS confidence 



























































   219220.........230.........240.........250.........260.........270........
 
   122.......130.........140.........150.........160.........170.........180.
Predicted Secondary structure 





















Query SS confidence 



























































Query Sequence  MGCGLGGVSGYDGGLLSGSEKQTMQDLNDRLANYLDKVRALEEANTDLECKIKDWYGKHG
Query Conservation                      
  
  
   
     

  

  
  

  
        
Alig confidence 



























































Template Conservation                    
    
     

    
     
 


    

        
Template Sequence  GHNAVYVSVSDVLSPDQVKQRQDEENRRQQEWDATHPVEAAERNYERARAELNQANEDVA
Template Known Secondary structure  S




B




Template Predicted Secondary structure 





Template SS confidence 



























































   279280.........290.........300.........310.........320.........330........
 
   182.......190.........200.........210.........220.........230.........240.
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  SVKGGSGRDYSQYYSIIEDLKKQILSATCENARMTLQIDNARLAADDFRMKYEHELCLRE
Query Conservation                     
   
     
   
  

  
           
       
Alig confidence 



























































Template Conservation                    
              
                          
Template Sequence  RNQERQAKAVQVYNSRKSELDAANKTLADAIAEIKQFNRFAHDPMAGGHRMWQMAGLKAQ
Template Known Secondary structure  TTGGGTT
SSSS
Template Predicted Secondary structure 
Template SS confidence 



























































   339340.........350.........360.........370.........380.........390........
 
   242.......250.........260.........270.........280.........290.........300.
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  CLEADINGLRKVLDEMTMTRCDLEMQIEGLTEELVFLRKNHEEEMKCMQGSSGGDVTVEM
Query Conservation   

 

  
   
         
      
  

  
          
            
Alig confidence 



























































Template Conservation                            
    
     
      
  
        
   
Template Sequence  RAQTDVNNKQAAFDAAAKEKSDADAALSSAMESRKKKEDKKRSAENNLNDEKNKPRKGFK
Template Known Secondary structure  TTTTTTTS



Template Predicted Secondary structure 
Template SS confidence 



























































   399400.........410.........420.........430.........440.........450........
 
   302...
Predicted Secondary structure 
Query SS confidence 



Query Sequence  NAAP
Query Conservation      
Alig confidence 



Template Conservation 
   
Template Sequence  DYGH
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



   459460..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D