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Job Description | A1L317 | Confidence | 90.12% | Date | Tue Jul 30 13:02:37 BST 2013 |
Rank | 86 | Aligned Residues | 86 |
% Identity | 21% | Template | c2v4hA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:nf-kappa-b essential modulator; |
PDBTitle: nemo cc2-lz domain - 1d5 darpin complex
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Resolution | 2.9 Å |
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197 | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
I | I | E | D | L | K | K | Q | I | L | S | A | T | C | E | N | A | R | M | T | L | Q | I | D | N | A | R | L | A | A | D | D | F | R | M | K | Y | E | H | E | L | C | L | R | E | C | L | E | A | D | I | N | G | L | R | K | V | L | D | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Q | L | E | D | L | R | Q | Q | L | Q | Q | A | E | E | A | L | V | A | K | Q | E | L | I | D | K | L | K | E | E | A | E | Q | H | K | I | V | M | E | T | . |
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V | P | V | L | K | A | Q | A | D | I | Y | K | A | D | F | Q | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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252 | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | |
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257 | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
M | T | M | T | R | C | D | L | E | M | Q | I | E | G | L | T | E | E | L | V | F | L | R | K | N | H | E | E | E | M |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | R | H | A | R | E | K | L | V | E | K | K | E | Y | L | Q | E | Q | L | E | Q | L | Q | R | E | F | N | K | L | K |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
308 | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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