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Job DescriptionA1L317
Confidence35.66%DateTue Jul 30 13:02:37 BST 2013
Rank194Aligned Residues215
% Identity10%Templatec3hajA_
PDB info PDB header:endocytosisChain: A: PDB Molecule:human pacsin2 f-bar; PDBTitle: crystal structure of human pacsin2 f-bar domain (p2121212 lattice)
Resolution2.78 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   147..150.........160.........170.........180.........190.........200......
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Query Sequence  DLNDRLANYLDKVRALEEANTDLECKIKDWYGKHGSVKGGSGRDYSQYYSIIEDLKKQIL
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Template Sequence  RLCSDLMNCLHERARIEKAYAQQLTEWARRWRQLVEKGPQYGTVEKAWMAFMSEAERVSE
Template Known Secondary structure  SSS

S
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   37..40.........50.........60.........70.........80.........90......
 
   207..210......... 220.........230.........240...
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Query Sequence  SATCENARMTLQI. . . . . . . . . . . . . . . . . . . . . . . DNARLAADDFRMKYEHELCLRECL
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Template Sequence  LHLEVKASLMNDDFEKIKNWQKEAFHKQMMGGFKETKEAEDGFRKAQKPWAKKLKEVEAA
Template Known Secondary structure  T

B
SSSSB
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   97..100.........110.........120.........130.........140.........150......
 
   244.....250.........260.........270.........280.........290..... ....300..
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Query Sequence  EADINGLRKVLDEMTMTRCDLEMQIEGLTEELVFLRKNHEEEMKCMQGSSGG. DVTVEMN
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Template Sequence  KKAHHAACKEEKLAISREANSKADPSLNPEQLKKLQDKIEKCKQDVLKTKEKYEKSLKEL
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   157..160.........170.........180.........190.........200.........210......
 
   303......310.........320.........330.........340.. .......350.........360.
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Query Sequence  AAPGVDLTKLLNDMRAQYEAMAEQNRQEAERQFNERSASL. QAQISSDAGEANCARSEVM
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Template Sequence  DQGTPQYMENMEQVFEQCQQFEEKRLRFFREVLLEVQKHLDLSNVAGYKAIYHDLEQSIR
Template Known Secondary structure  TTS

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   217..220.........230.........240.........250.........260.........270......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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