Return to main results Retrieve Phyre Job Id

Job DescriptionA1L317
Confidence58.84%DateTue Jul 30 13:02:37 BST 2013
Rank139Aligned Residues235
% Identity7%Templatec2q13A_
PDB info PDB header:protein transportChain: A: PDB Molecule:dcc-interacting protein 13 alpha; PDBTitle: crystal structure of bar-ph domain of appl1
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   154.....160.........170.........180.........190.........200.........210...
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  NYLDKVRALEEANTDLECKIKDWYGKHGSVKGGSGRDYSQYYSIIEDLKKQILSATCENA
Query Conservation      

  

  
  

  
                           
   
     
  
Alig confidence 



























































Template Conservation   

  
   
  
  
   
  
 
                  
   
            
Template Sequence  QTRSLLGVFEEDATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKEYEKQRFPLDE
Template Known Secondary structure  TTTTS





Template Predicted Secondary structure 




Template SS confidence 



























































   18.20.........30.........40.........50.........60.........70.......
 
   214.....220.........230.........240.........250.........260.........270...
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  RMTLQIDNARLAADDFRMKYEHELCLRECLEADINGLRKVLDEMTMTRCDLEMQIEGLTE
Query Conservation   
  

  
           
        

 

  
   
         
      
  
Alig confidence 






























..


























Template Conservation       
       
 
              
..  

       
      

 
     
Template Sequence  VMSSTLQQFSKVIDELSSCHAVLSTQLADAM. . MFPITQFKERDLKEILTLKEVFQIASN
Template Known Secondary structure  T..T
Template Predicted Secondary structure  ..
Template SS confidence 



























































   81........90.........100.........110. ........120.........130........
 
   274.....280.........290.........300.........310.........320.........330...
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  ELVFLRKNHEEEMKCMQGSSGGDVTVEMNAAPGVDLTKLLNDMRAQYEAMAEQNRQEAER
Query Conservation 

  
          
                   
   
                    
Alig confidence 



























































Template Conservation   

    
     
         
    
   

       

   
  
       
  
Template Sequence  DHDAAINRYSRLSKKRENDKVKYEVTEDVYTSRKKQHQTMMHYFCALNTLQYKKKIALLE
Template Known Secondary structure  T

SSS

Template Predicted Secondary structure 





Template SS confidence 



























































   139140.........150.........160.........170.........180.........190........
 
   334.....340.........350... ......360.........370.........380.........390
Predicted Secondary structure  .
Query SS confidence 



















.




































Query Sequence  QFNERSASLQAQISSDAGEA. NCARSEVMELKRTVQTLEIELQSQLALKCSLEGTLAD
Query Conservation                     
.     
              
         
   
  
Alig confidence 



















.




































Template Conservation   
          
          
      
                  
        
Template Sequence  PLLGYMQAQISFFKMGSENLNEQLEEFLANIGTSVQNVRREMDSDIETMQQTIEDLEV
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 

























































   199200.........210.........220.........230.........240.........250......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D