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Job DescriptionA1L317
Confidence57.30%DateTue Jul 30 13:02:37 BST 2013
Rank143Aligned Residues258
% Identity10%Templatec2p03A_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:alpha-2-macroglobulin receptor-associated PDBTitle: the structure of receptor-associated protein(rap)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   171........180.........190.........200.........210.........220.........230
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Query Sequence  CKIKDWYGKHGSVKGGSGRDYSQYYSIIEDLKKQILSATCENARMTLQIDNARLAADDFR
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Template Sequence  NQLWEKAQRLHLPPVRLAELHADLKIQERDELAWKKLKLDGLDEDGEKEARLIRNLNVIL
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   26...30.........40.........50.........60.........70.........80.....
 
   231... .....240.........250.........260....
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Query Sequence  MKYE. . . . . . . . . . . . . . . . . . . . . . . . . . HELCLRECLEADINGLRKVLDEMTMTRCDL
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Template Conservation                                                              
Template Sequence  AKYGLDGKKDARQVTSNSLSGTQEDGLDDPRLEKLWHKAKTSGKFSGEELDKLWREFLHH
Template Known Secondary structure  T




















SS
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   86...90.........100.........110.........120.........130.........140.....
 
   265....270.........280.........290.........300.........310.........320....
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Query Sequence  EMQIEGLTEELVFLRKNHEEEMKCMQGSSGGDVTVEMNAAPGVDLTKLLNDMRAQYEAMA
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Template Conservation                                                              
Template Sequence  KEKVHEYNVLLETLSRTEEIHENVISPSDLSDIKGSVLHSRHTELKEKLRSINQGLDRLR
Template Known Secondary structure  TTS

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S
TTTT

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   146...150.........160.........170.........180.........190.........200.....
 
   325.... 330.........340.........350.........360.........370........
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Query Sequence  EQNRQ. . . . . . EAERQFNERSASLQAQISSDAGEANCARSEVMELKRTVQTLEIELQSQL
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Template Conservation                                                              
Template Sequence  RVSHQGYSTEAEFEEPRVIDLWDLAQSANLTDKELEAFREELKHFEAKIEKHNHYQKQLE
Template Known Secondary structure  T

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SSTTTTTTT

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   206...210.........220.........230.........240.........250.........260.....
 
   379380.........390.........400.........410.........420.........430.
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Query Sequence  ALKCSLEGTLADTEAGYVAQLSGIQAQISSLEEQLSQIRAETQCQSAEYECLL
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Template Sequence  IAHEKLRHAES. . . VGDGERVSRSREKHALLEGRTKELGYTVKKHLQDLSGRI
Template Known Secondary structure  GG...GSS
SS
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   266...270...... ...280.........290.........300.........310.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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