Return to main results Retrieve Phyre Job Id

Job DescriptionA1L317
Confidence88.53%DateTue Jul 30 13:02:37 BST 2013
Rank93Aligned Residues221
% Identity10%Templatec1qu7A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:methyl-accepting chemotaxis protein i; PDBTitle: four helical-bundle structure of the cytoplasmic domain of a serine2 chemotaxis receptor
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   220.........230.........240.........250.........260.........270.........
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  DNARLAADDFRMKYEHELCLRECLEADINGLRKVLDEMTMTRCDLEMQIEGLTEELVFLR
Query Conservation    
           
        

 

  
   
         
      
  

  
 
Alig confidence 



























































Template Conservation 
             

                                
         
 
Template Sequence  EQQAASLEQTAASMEQLTATVKQNAENARQASHLALSASETAQRGGKVVDNVVQTMRDIS
Template Known Secondary structure  STT
Template Predicted Secondary structure 
Template SS confidence 



























































   296...300.........310.........320.........330.........340.........350.....
 
   280.........290.........300.........310.........320.........330.........
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  KNHEEEMKCMQGSSGGDVTVEMNAAPGVDLTKLLNDMRAQYEAMAEQNRQEAERQFNERS
Query Conservation           
                   
   
                          
Alig confidence 

















































.....




Template Conservation              
  

  
  

 

 







 
  
   
 

  .....

   
Template Sequence  TSSQKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRN. . . . . LAQRS
Template Known Secondary structure  TTGGG.....
Template Predicted Secondary structure  .....
Template SS confidence 



























































   356...360.........370.........380.........390.........400..... ....410
 
   340.........350.........360.........370.........380.........390.........
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  ASLQAQISSDAGEANCARSEVMELKRTVQTLEIELQSQLALKCSLEGTLADTEAGYVAQL
Query Conservation               
     
              
         
   
           
Alig confidence 



























































Template Conservation        
      
                                  
           
Template Sequence  AQAAREIKSLIEDSVGKVDVGSTLVESAGETMAEIVSAVTRVTDIMGEIASASDEQSRGI
Template Known Secondary structure  TTTTT
Template Predicted Secondary structure 
Template SS confidence 



























































   411........420.........430.........440.........450.........460.........470
 
   400.........410.........420.........430.........440.....
Predicted Secondary structure 
Query SS confidence 













































Query Sequence  SGIQAQISSLEEQLSQIRAETQCQSAEYECLLNIKTRLEQEIETYR
Query Conservation           

 

  
  
      
   
      

 


  
Alig confidence 













































Template Conservation    
      
     
              
   
  
   
  

Template Sequence  DQVGLAVAEMDRVTQQNAALVEQSAAAAAALEEQASRLTEAVAVFR
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 













































   471........480.........490.........500.........510......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D