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Job DescriptionA1L317
Confidence89.26%DateTue Jul 30 13:02:37 BST 2013
Rank88Aligned Residues243
% Identity9%Templatec1g8xB_
PDB info PDB header:structural proteinChain: B: PDB Molecule:myosin ii heavy chain fused to alpha-actinin 3; PDBTitle: structure of a genetically engineered molecular motor
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   183......190.........200.........210.........220... ......230.......
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Query Sequence  VKGGSGRDYSQYYSIIEDLKKQILSATCENARMTLQIDNAR. . . . . LAADDFRMKYEHEL
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Template Sequence  QLARIEEAREQRLGSEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHK
Template Known Secondary structure  T




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   750.........760.........770.........780.........790.........800.........
 
   238.240.........250.........260......... 270.........280.........290.
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Query Sequence  CLRECLEADINGLRKVLDEMTMTRCDLEMQIE. . . . . . GLTEELVFLRKNHEEEMKCMQG
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Template Sequence  EYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQE
Template Known Secondary structure  TTTTTTS





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   810.........820.........830.........840.........850.........860.........
 
   292.......300.........310.........320.........330.........340.........350.
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Query Sequence  SSGGDVTVEMNAAPGVDLTKLLNDMRAQYEAMAEQNRQEAERQFNERSASLQAQISSDAG
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Template Sequence  HAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSV. . . . . . YLGSNETGDSITAVQA
Template Known Secondary structure  TGGGT......GGG

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   870.........880.........890.........900....... ..910.........920...
 
   352.......360.........370.........380.........390.........400.........410.
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Query Sequence  EANCARSEVMELKRTVQTLEIELQSQLALKCSLEGTLADTEAGYVAQLSGIQAQISSLEE
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Template Sequence  KLKNLEAFDGECQSLEGQSNSDLLSILAQLTEL. . NYNGVPELTERKDTFFAQQWTGVKS
Template Known Secondary structure  TTTTTTT..T
TTTTT
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   924.....930.........940.........950...... ...960.........970.........980.
 
   412.......420.........430...
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Query Sequence  QLSQIRAETQCQSAEYECLLNI
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Template Sequence  SAETYKNTLLAELERLQKIEDL
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   982.......990.........1000...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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