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Job DescriptionA1L317
Confidence81.93%DateTue Jul 30 13:02:37 BST 2013
Rank108Aligned Residues80
% Identity15%Templatec2zvnF_
PDB info PDB header:signaling protein/transcriptionChain: F: PDB Molecule:nf-kappa-b essential modulator; PDBTitle: nemo cozi domain incomplex with diubiquitin in p2121212 space group
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   185....190.........200.........210...... ...220.........230.........240.
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Query Sequence  GGSGRDYSQYYSIIEDLKKQILSATCENARMT. . . LQIDNARLAADDFRMKYEHELCLRE
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Template Sequence  EDLRQQLQQAEEALVAKQELIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERHARE
Template Known Secondary structure  TT
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   254.....260.........270.........280.........290.........300.........310...
 
   242.......250.........260....
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Query Sequence  CLEADINGLRKVLDEMTMTRCDL
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Template Sequence  KLVEKKEYLQEQLEQLQREFNKL
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   314.....320.........330......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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