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Job Description | A1L317 | Confidence | 97.80% | Date | Tue Jul 30 13:02:37 BST 2013 |
Rank | 40 | Aligned Residues | 108 |
% Identity | 6% | Template | c1deqF_ |
PDB info |
PDB header:blood clotting | Chain: F: PDB Molecule:fibrinogen (gamma chain); |
PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution)
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Resolution | 3.50 Å |
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341 | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | L | Q | A | Q | I | S | S | D | A | G | E | A | N | C | A | R | S | E | V | M | E | L | K | R | T | V | Q | T | L | E | I | E | L | Q | S | Q | L | A | L | K | C | S | L | E | G | T | L | A | D | T | E | A | G | Y | V | A | Q | L | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
F | L | N | N | Y | Q | T | S | V | D | K | D | L | R | T | L | E | G | I | L | Y | Q | V | E | N | K | T | S | E | A | R | E | L | V | K | A | I | Q | I | S | Y | N | P | D | Q | P | S | K | P | N | N | I | E | S | A | T | K | N | S | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S | B | T | T | B |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
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401 | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | I | Q | A | Q | I | S | S | L | E | E | Q | L | S | Q | I | R | A | E | T | Q | C | Q | S | A | E | Y | E | C | L | L | N | I | K | T | R | L | E | Q | E | I | E | T | Y | R | R | L | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | M | M | E | E | I | M | K | Y | E | T | L | I | S | T | H | E | S | T | I | R | F | L | Q | E | I | Y | N | S | N | S | Q | K | I | V | N | L | R | D | K | V | V | Q | L | E | A | N | C |
Template Known Secondary structure |   |
 |  | T | T | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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