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Job DescriptionA1L317
Confidence98.13%DateTue Jul 30 13:02:37 BST 2013
Rank25Aligned Residues173
% Identity12%Templatec3vkgA_
PDB info PDB header:motor proteinChain: A: PDB Molecule:dynein heavy chain, cytoplasmic; PDBTitle: x-ray structure of an mtbd truncation mutant of dynein motor domain
Resolution2.81 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   141........150.........160.........170.........180.........190.........200
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Query Sequence  EKQTMQDLNDRLANYLDKVRALEEANTDLECKIKDWYGKHGSVKGGSGRDYSQYYSIIED
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Template Sequence  KRDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQA
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   3274.....3280.........3290.........3300.........3310.........3320.........3330...
 
   201........210.........220.. .......230.........240.......
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Query Sequence  LKKQILSATCENARMTLQIDNA. . . . . . . . . . . . . RLAADDFRMKYEHELCLRECLEADI
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Template Sequence  AEIKQKDARELQVQLDVRNKEIAVQKVKAYADLPLREEVEQLENAANELKLKQDEIVATI
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   3334.....3340.........3350.........3360.........3370.........3380.........3390...
 
   248.250.........260.........270.........280.........290.........300.......
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Query Sequence  NGLRKVLDEMTMTRCDLEMQIEGLTEELVFLRKNHEEEMKCMQGSSGGDVTVEMNAAPGV
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Template Sequence  TALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSERGRWEQQSENFN
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   3523......3530.........3540.........3550.........3560.........3570.........3580..
 
   308.310...
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Query Sequence  DLTKLL
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Template Conservation       
Template Sequence  TQMSTV
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   3583.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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