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Job Description | A1L317 | Confidence | 31.87% | Date | Tue Jul 30 13:02:37 BST 2013 |
Rank | 204 | Aligned Residues | 78 |
% Identity | 9% | Template | c3a5tB_ |
PDB info |
PDB header:transcription regulator/dna | Chain: B: PDB Molecule:transcription factor mafg; |
PDBTitle: crystal structure of mafg-dna complex
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Resolution | 2.80 Å |
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178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | K | H | G | S | V | K | G | G | S | G | R | D | Y | S | Q | Y | Y | S | I | I | E | D | L | K | K | Q | I | L | S | A | T | C | E | N | A | R | M | T | L | Q | I | D | N | A | R | L | A | A | D | D | F | R | M | K | Y | E | H | E | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
R | E | L | N | Q | H | L | R | G | L | S | K | E | E | I | I | Q | L | K | Q | R | R | R | T | L | K | N | R | G | Y | A | A | S | C | R | V | K | R | V | T | Q | K | E | E | L | E | K | Q | K | A | E | L | Q | Q | E | V | E | K | L | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
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238 | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
C | L | R | E | C | L | E | A | D | I | N | G | L | R | K | V | L | D |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | E | N | A | S | X | K | L | E | L | D | A | L | R | S | K | Y | E |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  | S | S | S |  |  |  |  | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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