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Job DescriptionA1L317
Confidence97.50%DateTue Jul 30 13:02:37 BST 2013
Rank47Aligned Residues283
% Identity11%Templatec1u4qB_
PDB info PDB header:structural proteinChain: B: PDB Molecule:spectrin alpha chain, brain; PDBTitle: crystal structure of repeats 15, 16 and 17 of chicken brain2 alpha spectrin
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   139140.........150.........160.........170.........180.........190........
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Query Sequence  GSEKQTMQDLNDRLANYLDKVRALEEANTDLECKIKDWYGKHGSVKGGSGRDYSQYYSII
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Template Sequence  GKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRETINGRF
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   1692.......1700.........1710.........1720.........1730.........1740.........1750.
 
   199200.........210.........220.........230.........240.... .....250...
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Query Sequence  EDLKKQILSATCENARMTLQIDNARLAADDFRMKYEHELCLRECLE. . . . . ADINGLRKV
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Template Sequence  QRIKSMAAARRAKLNESH. RLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKK
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   1752.......1760......... 1770.........1780.........1790.........1800.........1810
 
   254.....260.........270.........280.........290.........300.........310...
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Query Sequence  LDEMTMTRCDLEMQIEGLTEELVFLRKNHEEEMKCMQGSSGGDVTVEMNAAPGVDLTKLL
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Template Sequence  HKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQR
Template Known Secondary structure  TT

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   1811........1820.........1830.........1840.........1850.........1860.........1870
 
   314.....320.........330.........340.........350.........360.........370...
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Query Sequence  NDMRAQYEAMAEQNRQEAERQFNERSASLQAQISSDAGEANCARSEVMELKRTVQTLEIE
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Template Sequence  LEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDR
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   1871........1880.........1890.........1900.........1910.........1920.........1930
 
   374.....380.........390.........400.........410.........420..
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Query Sequence  LQSQLALKCSLEGTLADTEAGYVAQLSGIQAQISSLEEQLSQIRAETQC
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Template Sequence  VNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDE
Template Known Secondary structure  TT
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   1931........1940.........1950.........1960.........1970.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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