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Job DescriptionA1L317
Confidence93.33%DateTue Jul 30 13:02:37 BST 2013
Rank73Aligned Residues233
% Identity7%Templatec1quuA_
PDB info PDB header:contractile proteinChain: A: PDB Molecule:human skeletal muscle alpha-actinin 2; PDBTitle: crystal structure of two central spectrin-like repeats from2 alpha-actinin
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   196...200.........210.........220.........230 .........240.........
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Query Sequence  SIIEDLKKQILSATCENARMTLQIDNARLAADDFR. . . . . . MKYEHELCLRECLEADING
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Template Sequence  RRLERLEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAA
Template Known Secondary structure  TTT



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   7..10.........20.........30.........40.........50.........60......
 
   250.........260.........270.........280.........290..... ....300........
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Query Sequence  LRKVLDEMTMTRCDLEMQIEGLTEELVFLRKNHEEEMKCMQGSSGG. DVTVEMNAAPGVD
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Template Sequence  HQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLET
Template Known Secondary structure  TT
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   67..70.........80.........90.........100.........110.........120......
 
   309310.........320.........330.........340.........350.........360........
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Query Sequence  LTKLLNDMRAQYEAMAEQNRQEAERQFNERSASLQAQISSDAGEANCARSEVMELKRTVQ
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Template Sequence  IDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQ
Template Known Secondary structure  TTTT





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   127..130.........140.........150.........160.........170.........180......
 
   369370.........380.........390.........400.........410.........420........
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Query Sequence  TLEIELQSQLALKCSLEGTLADTEAGYVAQLSGIQAQISSLEEQLSQIRAETQCQSAEYE
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Template Sequence  SIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQH
Template Known Secondary structure  S
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S
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   187..190.........200.........210.........220.........230.........240......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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