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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank116Aligned Residues255
% Identity32%Templatec3dlsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:pas domain-containing serine/threonine-protein kinase; PDBTitle: crystal structure of human pas kinase bound to adp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.. .......70.
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Query Sequence  DGELYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKN. . . . . . . . . KPCFQPAMK
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Template Sequence  EGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTL
Template Known Secondary structure  TT
SSSSS
STTTTSTTS
TTSTTT
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   992.......1000.........1010.........1020.........1030.........1040.........1050.
 
   72.......80.........90.........100...... ...110.........120.........130
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Query Sequence  EANIMKKIKHPNIVSLLQVFETKTRGYLIMELVEG. QELYEYIKSSGHIEEDEARQIFLQ
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Template Sequence  EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ
Template Known Secondary structure  TT


TTB


SS

TTS
BT




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   1052.......1060.........1070.........1080.........1090.........1100.........1110.
 
   131........140.........150.........160.........170.........180.........190
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Query Sequence  ILSAVSYCHGLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAP
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Template Sequence  LVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAP
Template Known Secondary structure  TT
S

SGGG
TTS



TT


TT

B
S

S
GGG

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   1112.......1120.........1130.........1140.........1150.........1160.........1170.
 
   191........200.........210.........220.........230.........240.........250
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Query Sequence  ELFLWKSYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPAPCGVSNELK
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Template Sequence  EVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE. . . . . . LEETVEAAIHPPYLVSKELM
Template Known Secondary structure  TT

B
SSS
S
SS......GGGGTTT



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   1172.......1180.........1190.........1200..... ....1210.........1220.....
 
   251........260.........270.........280.
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Query Sequence  DLLSLLMTVNPKYRPTVTEVMKHPWLRGHCK
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Template Sequence  SLVSGLLQPVPERRTTLEKLVTDPWVTQPVN
Template Known Secondary structure  T
SSGGGS


TTTT



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   1226...1230.........1240.........1250......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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