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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank76Aligned Residues253
% Identity31%Templatec3c0hB_
PDB info PDB header:transferaseChain: B: PDB Molecule:peripheral plasma membrane protein cask; PDBTitle: cask cam-kinase domain- amppnp complex, p1 form
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50......... 60.........70.......
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Query Sequence  LYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVL. . . . . . LKNKPCFQPAMKEANIMK
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Template Sequence  FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH
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   8.10.........20.........30.........40.........50.........60.......
 
   78.80.........90.........100.........110....... ..120.........130...
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Query Sequence  KIKHPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSG. . . . HIEEDEARQIFLQILS
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Template Sequence  MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE
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TTB

TT


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   68.70.........80.........90.........100.........110.........120.......
 
   134.....140.........150...... ...160.........170... ......180.........
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Query Sequence  AVSYCHGLGIVHRDLKPDNIMID. . . DKGSIKIIDFGLSTQVK. PGDLLDEHCGAYAFGA
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Template Sequence  ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMA
Template Known Secondary structure  TT
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GGGSSSSTT




TT


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GGG

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   128.130.........140.........150.........160.........170.........180.......
 
   190.........200.........210.........220.........230.........240.. ...
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Query Sequence  PELFLWKSYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPAP. . . . CGV
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Template Sequence  PEVVKREPY. GKPVDVWGCGVILFILLSGCLPFYGTK. ERLFEGIIKGKYKMNPRQWSHI
Template Known Secondary structure  TT

B.
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   188.190...... ...200.........210.........220... ......230.........240.....
 
   246...250.........260.........270........
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Query Sequence  SNELKDLLSLLMTVNPKYRPTVTEVMKHPWLRG
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Template Sequence  SESAKDLVRRMLMLDPAERITVYEALNHPWLKE
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   246...250.........260.........270........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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