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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank262Aligned Residues253
% Identity29%Templatec2pvmA_
PDB info PDB header:transferaseChain: A: PDB Molecule:casein kinase ii subunit alpha; PDBTitle: structure-based design of pyrazolo[1,5-a][1,3,5]triazine2 derivatives as potent inhibitors of protein kinase ck2
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70.........80
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Query Sequence  DGELYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKNKPCFQPAMKEANIMKKIK
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Template Sequence  QWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPV. . KKKKIKREIKILQNLG
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GGG
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S
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   32.......40.........50.........60.........70... ......80.........
 
   81........90...... ...100.........110.........120.........130........
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Query Sequence  HPNIVSLLQVFETKTR. . GYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSYC
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Template Sequence  GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT. . . LTDYDIRYYIYELLKALDYC
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TTB


TTT







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   91........100.........110.........120....... ..130.........140.......
 
   139140.........150........ .160.........170.........180.........190.......
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Query Sequence  HGLGIVHRDLKPDNIMIDDK. GSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKS
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Template Sequence  HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ
Template Known Secondary structure  TT



SGGGTTTT


TT


TT



S

S
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TT

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   148.150.........160.........170.........180.........190.........200.......
 
   198.200.........210.........220.. .......230......
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Query Sequence  YDGTKSDLWALGVILYYMVVGKVPF. DSYIIPELQRQILA. . . . . . . . . . . . . . . . . . . .
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Template Sequence  DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDP
Template Known Secondary structure  S

TT
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TT



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   208.210.........220.........230.........240.........250.........260.......
 
   237..240.........250.........260.........270........
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Query Sequence  . . . . . . . . . . . . . . . . . GVYPAPCGVSNELKDLLSLLMTVNPKYRPTVTEVMKHPWLRG
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Template Sequence  QLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ
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GGGG

TTTGGG

TT

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SGGG
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   268.270.........280.........290.........300.........310.........320......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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