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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank69Aligned Residues271
% Identity30%Templatec1zrzA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, iota; PDBTitle: crystal structure of the catalytic domain of atypical2 protein kinase c-iota
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60 .........70........ .
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Query Sequence  YSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLL. . . . KNKPCFQPAMKEANIMKK. I
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Template Sequence  LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS
Template Known Secondary structure  STT
SSTTT

GGG

STTTTTTT
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   242.......250.........260.........270.........280.........290.........300.
 
   80.........90.........100.........110.........120.........130.........
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Query Sequence  KHPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSYCH
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Template Sequence  NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH
Template Known Secondary structure  SSTTB


B
SS


S
BTTSS

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   302.......310.........320.........330.........340.........350.........360.
 
   140.........150.........160.........170.........180.........190.........
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Query Sequence  GLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKSYD
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Template Sequence  ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSFCGTPNYIAPEILRGEDY.
Template Known Secondary structure  TT
B




GGG
TTS



TT
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TT

B


S
GGG

TT

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   362.......370.........380.........390.........400.........410.........420
 
   200.........210.........220.........230.........240.........250.........
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Query Sequence  GTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPAPCGVSNELKDLLSLLMTV
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Template Sequence  GFSVDWWALGVLMFEMMAGRSPFDQNTEDYLFQVILEKQIRIPRSMSVKAASVLKSFLNK
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TSS
S









TTS
T
S
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   422.......430.........440.........450.........460.........470.........480.
 
   260...... ...270.........280.........290......
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Query Sequence  NPKYRPT. . . . . . VTEVMKHPWLRGHCKGLTNIHEEPVPVRPD
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Template Sequence  DPKERLGCLPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPV
Template Known Secondary structure  SSTTSTTTSTTTSGGGSS

TTT
S

S



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   491........500.........510.........520.........530...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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