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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank229Aligned Residues245
% Identity30%Templatec3zduA_
PDB info PDB header:transferaseChain: A: PDB Molecule:cyclin-dependent kinase-like 3; PDBTitle: crystal structure of the human cdkl3 kinase domain
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80....
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Query Sequence  YSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKNKPCFQPAMKEANIMKKIKHPNI
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Template Sequence  MEMYETLGKVGEGSYGTVMKCKHKNTGQIVAIKIFYN. . . . . KIAMREIKFLKQFHHENL
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   1........10.........20.........30....... ..40.........50.....
 
   85....90.........100.........110.........120.........130.........140....
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Query Sequence  VSLLQVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSYCHGLGIV
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Template Sequence  VNLIEVFRQKKKIHLVFEFIDHTVLDELQHYCHGLESKRLRKYLFQILRAIDYLHSNNII
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   63......70.........80.........90.........100.........110.........120..
 
   145....150.........160.........170.........180.........190.........200....
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Query Sequence  HRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKSYDGTKSD
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Template Sequence  HRDIKPENILVSQSGITKLCDFGFARTDIYDD. . . . EVATRWYRAPELVLKDTSYGKPVD
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SGGG
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   123......130.........140.........150.... .....160.........170........
 
   205....210.........220.........230.........240...
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Query Sequence  LWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPAPC. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  IWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLSPHLQNIFSKSPIFAGVVLPQVQ
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GGGTT






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   184.....190.........200.........210.........220.........230.........240...
 
   244.....250.........260.........270........
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Query Sequence  . . . . . . . . . . GVSNELKDLLSLLMTVNPKYRPTVTEVMKHPWLRG
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Template Sequence  HPKNARKKYPKLNGLLADIVHACLQIDPADRISSSDLLHHEYFTR
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   244.....250.........260.........270.........280........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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