|   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
. | . | . | 40 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
|
|
|
|
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . |
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
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|
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|
|
|
|
| . |
. |
. |
. |
. |
|
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|
|
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|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
Query Sequence |   |
P | E | D | G | E | L | Y | S | Q | Y | K | V | V | R | T | L | G | H | . |
. |
G | T | Y | A | K | V | L | L | A | K | H | W | . |
. |
. |
. |
. |
L | T | G | T | P | V | A | V | K | V | L | L | K | N | K | P | C | . |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|   | . | . |
|   |
|
|   |
|
|   |
|   |   |   | . | . | . | . | . |   |
|
|   |   |
|
|
|
|   |
|   |   |   |   |   |   | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
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|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
  |   |
|   |
|
|   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | V | G | E | I | I | T | D | M | A | A | A | A | W | K | V | G | L | P | I | G | Q | F | G | C | I | Y | L | A | D | M | N | S | S | E | S | V | G | S | D | A | P | C | V | V | K | V | E | P | S | D | N | G | P | L | F | T | E | L | K |
Template Known Secondary structure |   |
| T | T |
|  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |
|
| S | S |
|
|
| T | T |
| S |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
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|
  |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
  |   |
|
|
|
|
|
|
66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
|
|
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
| . |
. |
. |
. |
|
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|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
F | Q | P | A | M | K | E | A | N | I | M | K | K | I | K | H | P | N | I | V | S | L | L | Q | V | F | E | . |
. |
. |
. |
T | K | T | R | G | Y | L | I | M | E | L | V | E | G | Q | E | L | Y | E | Y | I | K | S |
Query Conservation |   |
. | . | . | . | . | . |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |
|
|
|
|
|   |
|   |   |   |   |   | . | . | . | . |   |   |   |   |   |
|
|
|
|
|
|   |   |
|
|   |
|   |   |   |
|   |   |
Alig confidence |   |
. | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   | . |   |   |
|
|   |   |   |
|   |   |
Template Sequence |   |
F | Y | Q | R | A | A | K | P | E | Q | I | Q | K | W | I | R | T | R | K | L | K | Y | L | G | V | P | K | Y | W | G | S | G | L | H | D | K | N | G | K | S | Y | R | F | M | I | M | D | R | F | . |
G | S | D | L | Q | K | I | Y | E | A |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
| S |
|
|
| S |
|
|  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |
|  | . |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
. | . | . | . | . | 140 | . | . | . | . |
  |
  |   |
116 | . | |
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | |
|
. | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
Predicted Secondary structure |   |
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
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|
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|
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|
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|
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|
|
|
|
Query Sequence |   |
S | G | . |
H | I | E | E | D | E | A | R | Q | I | F | L | Q | I | L | S | A | V | S | Y | C | H | G | L | G | I | V | H | R | D | L | K | P | D | N | I | M | I | D | D | . |
. |
K | G | S | I | K | I | I | D | F | G | L | S | T | Q | V |
Query Conservation |   |
  |   | . |   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|   |
|
|
|   |   |   |
|
|
|
|
|
|
|
|   |
|
|
|
|   |   | . | . |   |   |   |
|
|
|   |
|
|
|
|
|   |   |   |
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|
|   |   |   |
|
|
|   |
|
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |
Template Sequence |   |
N | A | K | R | F | S | R | K | T | V | L | Q | L | S | L | R | I | L | D | I | L | E | Y | I | H | E | H | E | Y | V | H | G | D | I | K | A | S | N | L | L | L | N | Y | K | N | P | D | Q | V | Y | L | V | D | Y | G | L | A | Y | R | Y |
Template Known Secondary structure |   |
T | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |
|
|
|
|
| G | G | G |  |  |  |  | S | S |
| T | T |
|  |  |  |
|
|
| T | T |
|  |  | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
  |   |
145 | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
  |
  |   |
173 | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . |
Predicted Secondary structure |   |
|
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
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|
Query Sequence |   |
K | P | . |
. |
. |
. |
. |
. |
. |
. |
G | D | L | L | D | E | H | C | G | A | Y | A | F | G | A | P | E | L | F | L | W | K | S | Y | D | G | T | K | S | D | L | W | A | L | G | V | I | L | Y | Y | M | V | V | G | K | V | P | F | D | S |
Query Conservation |   |
  |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |   |
|
|   |   |
Alig confidence |   |
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
| . |
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|
|
|   |   |   |   |   |   |   | . |   |   |   |   |
|
|   |
|
|
|   |
|
|   |
|
|
|   |
|   |   |
|   |   |   |
Template Sequence |   |
C | P | E | G | V | H | K | A | Y | A | A | D | P | K | R | C | H | D | G | T | I | E | F | T | S | I | D | A | H | N | G | V | A | P | . |
S | R | R | G | D | L | E | I | L | G | Y | C | M | I | Q | W | L | T | G | H | L | P | W | E | D |
Template Known Secondary structure |   |
S | G | G | G |
|
|
|
| S | S |
|
| S | S |
|
|
|
|
|
| T | T | T |
|
|  |  |  |  | T | T |
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| T | T | G | G |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
  |   |
205 | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | |
. | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . |
  |
  |   |
225 | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
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|
|
|
|
Query Sequence |   |
Y | I | I | P | E | L | Q | R | Q | I | L | A | G | V | Y | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | P | C | G | V | S | N | E | L | K | D | L | L | S | L | L | M | T | V | N | P | K | Y | R | P | T | V | T | E | V | M | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |
|   |   |   |   |   |
|
|   |   |   |
|   |   |
|
|   |   |
|   |
|   |   |
|
|
|   |
Alig confidence |   |
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| . | . | . | . | . | . | . | . | . | . | . |
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Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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Template Sequence |   |
N | L | K | D | P | K | Y | V | R | D | S | K | I | R | Y | R | E | N | I | A | S | L | M | D | K | C | F | P | A | A | N | A | P | G | E | I | A | K | Y | M | E | T | V | K | L | L | D | Y | T | E | K | P | L | Y | E | N | L | R | D |
Template Known Secondary structure |   |
G | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  | S |
| T | T |
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|  |  |  |  |  |  |  |  |  |  |  | T |
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| T | T |
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Template Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
264 | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . |
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