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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank21Aligned Residues257
% Identity28%Templatec4fieB_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase pak 4; PDBTitle: full-length human pak4
Resolution3.11 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50.........60 .........70........
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Query Sequence  EDGELYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLL. KNKPCFQPAMKEANIMKK
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Template Sequence  DPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD
Template Known Secondary structure 
SS
GGGT
SS
TTT

STT
SSGGG
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   313......320.........330.........340.........350.........360.........370..
 
   7980.........90.........100.........110.........120.........130........
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Query Sequence  IKHPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSYC
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Template Sequence  YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT. RMNEEQIAAVCLAVLQALSVL
Template Known Secondary structure 


TTB

TT

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   373......380.........390.........400.........410 .........420.........430.
 
   139140.........150.........160.........170.........180.........190........
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Query Sequence  HGLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKSY
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Template Sequence  HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKLVGTPYWMAPELISRLPY
Template Known Secondary structure  TT



STTT
TT




TT


SS


B


TTT

TT

B
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   432.......440.........450.........460.........470.........480.........490.
 
   199200.........210.........220.........230....... ..240.........250.....
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Query Sequence  DGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAG. . . VYPAPCGVSNELKDLLSL
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Template Sequence  . GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR
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TSS
TTTTS
S




S
TTSS
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   493......500.........510.........520.........530.........540.........550.
 
   256...260.........270........
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Query Sequence  LMTVNPKYRPTVTEVMKHPWLRG
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Template Sequence  LLVRDPAQRATAAELLKHPFLAK
Template Known Secondary structure  S
SSTTTS

TT
GGGGG
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   552.......560.........570....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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