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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank224Aligned Residues242
% Identity28%Templatec4aguC_
PDB info PDB header:transferaseChain: C: PDB Molecule:cyclin-dependent kinase-like 1; PDBTitle: crystal structure of the human cdkl1 kinase domain
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60 .........70.........80..
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Query Sequence  SQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLL. . . KNKPCFQPAMKEANIMKKIKHP
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Template Sequence  EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP
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   2.......10.........20.........30.........40.........50.........60.
 
   83......90.........100.........110.........120.........130.........140..
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Query Sequence  NIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSYCHGLG
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Template Sequence  NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN
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TT

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   62.......70.........80.........90.........100.........110.........120.
 
   143......150.........160.........170.........180.........190.........200..
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Query Sequence  IVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKSYDGTK
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Template Sequence  CIHRDVKPENILITKHSVIKLCDFGFAR. . . . . . . . . . . LLTRWYRSPELLVGDTQYGPP
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SGGG
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   122.......130.........140......... 150.........160.........170
 
   203......210.........220.........230.........240...
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Query Sequence  SDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPAPC. . . . . . . . . . . . . . . . . . .
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Template Sequence  VDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPD
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   183......190.........200.........210.........220.........230.........240..
 
   244.....250.........260.........270........
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Query Sequence  . . . . . . . . . . . . GVSNELKDLLSLLMTVNPKYRPTVTEVMKHPWLRG
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Template Sequence  PEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFEN
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SS



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TTSGGGTT
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   243......250.........260.........270.........280.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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