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Job DescriptionA0AUV4
Confidence98.26%DateTue Jul 30 13:10:30 BST 2013
Rank344Aligned Residues133
% Identity20%Templatec1nw1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:choline kinase (49.2 kd); PDBTitle: crystal structure of choline kinase
Resolution2.02 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40......... 50.........60.........70....
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Query Sequence  GELYSQYKVVRTLGHGTYAKVLLAKHWL. . . . . . . TGTPVAVKVLLKNKPCFQPAMKEAN
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Template Sequence  KTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF. NPETESHLVAESV
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   6970.........80.........90.........100.........110.... .....120.......
 
   75.... 80.........90.........100.........110.........120.........130...
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Query Sequence  IMKKI. KHPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILS
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Template Sequence  IFTLLSERHLGPKLYGIFSG. . . . GRLEEYIPSRPL. . . . . . . . SCHEISLAHMSTKIAK
Template Known Secondary structure  TTSSS
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   128.130.........140....... ..150......... 160.........170.....
 
   134.....140..
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Query Sequence  AVSYCHGLG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RVAKVHQLEVPIWKEPDYLCEALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCLDLAREL
Template Known Secondary structure  TT


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   176...180.........190.........200.........210.........220.........230.....
 
   143......150.........160.........
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Query Sequence  . . . . . . . . . . . . . . . IVHRDLKPDNIMIDDKGSIKIIDFGLS
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Template Sequence  EFLRAHISLSKSPVTFCHNDLQEGNILLPKR. . LVLIDFEYA
Template Known Secondary structure  TT




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   236...240.........250.........260...... ...270.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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