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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank67Aligned Residues249
% Identity29%Templatec2pziA_
PDB info PDB header:transferaseChain: A: PDB Molecule:probable serine/threonine-protein kinase pkng; PDBTitle: crystal structure of protein kinase pkng from mycobacterium2 tuberculosis in complex with tetrahydrobenzothiophene ax20017
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40......... 50.........60
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Query Sequence  PAHIEEELPPPSPQPSNPEDGELYSQYKVVRTLGHGTYAKVLLAKHWL. TGTPVAVKVLL
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Template Sequence  PYCGSPYSFLPQLNPGD. . . . IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLV
Template Known Secondary structure  TTT


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   129130.........140..... ....150.........160.........170.........180....
 
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Query Sequence  . . KNKPCFQPAMKEANIMKKIKHPNIVSLLQVFET. . . . . KTRGYLIMELVEGQELYEYI
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Template Sequence  HSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL. . . .
Template Known Secondary structure  SS

GGGGG


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   185....190.........200.........210.........220.........230.........240
 
   114.....120.........130.........140.........150.........160.........170...
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Query Sequence  KSSGHIEEDEARQIFLQILSAVSYCHGLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVK
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Template Sequence  . . KQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT. EEQLKLIDLGAVSRIN
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SGGG
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   241........250.........260.........270.........280. ........290.......
 
   174.....180.........190.........200.........210.........220.........230...
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Query Sequence  PGDLLDEHCGAYAFGAPELFLWKSYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQ
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Template Sequence  SF. . . GYLYGTPGFQAPEIVRTGP. . TVATDIYTVGRTLAALTLDLPTRNGRYVDGL. . .
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   302. ......310.........320.. .......330.........340.........350...
 
   234.....240.........250.........260.... .....270..
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Query Sequence  ILAGVYPAPCGVSNELKDLLSLLMTVNPKYR. PTVTEVMK
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Template Sequence  . . . PEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSA
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   354.....360.........370.........380.........390
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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