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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank144Aligned Residues247
% Identity24%Templatec3kulB_
PDB info PDB header:transferaseChain: B: PDB Molecule:ephrin type-a receptor 8; PDBTitle: kinase domain of human ephrin type-a receptor 8 (epha8)
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50... ......60 .........70.........
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Query Sequence  YSQYKVVRTLGHGTYAKVLLAKHWLTGTP. . . VAVKVLL. . KNKPCFQPAMKEANIMKKI
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Template Sequence  ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF
Template Known Secondary structure  GGGTTTTT
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TT
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   632.......640.........650.........660.........670.........680.........690.
 
   80.........90.........100.........110....... ..120.........130........
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Query Sequence  KHPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSG. HIEEDEARQIFLQILSAVSYC
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Template Sequence  DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL
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   692.......700.........710.........720.........730.........740.........750.
 
   139140.........150.........160.........170... ......180.........190......
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Query Sequence  HGLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVK. . PGDLLDEHCGAYAFGAPELFLWK
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Template Sequence  SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAATTGGKIPIRWTAPEAIAFR
Template Known Secondary structure  TT
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SGGG
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   752.......760.........770.........780.........790.........800.........810.
 
   197..200.........210....... ..220.........230....... ..240.........250....
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Query Sequence  SYDGTKSDLWALGVILYYMVV. GKVPFDSYIIPELQRQILAG. VYPAPCGVSNELKDLLS
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Template Sequence  TF. SSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLML
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TTT

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   814. ....820.........830.........840.........850.........860.........870..
 
   255....260.........270..
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Query Sequence  LLMTVNPKYRPTVTEVMK
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Template Sequence  DCWHKDRAQRPRFSQIVS
Template Known Secondary structure  T
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   873......880.........890
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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