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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank36Aligned Residues254
% Identity37%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60. ........70.........80
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Query Sequence  LYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLK. . . NKPCFQPAMKEANIMKKIK
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Template Sequence  FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ
Template Known Secondary structure 
TTTTTTTT


SS



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   910.........20.........30.........40.........50.........60........
 
   81........90.........100.........110.........120.........130.........140
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Query Sequence  HPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSYCHG
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Template Sequence  HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS
Template Known Secondary structure 
TTB


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S
BTT
S


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   6970.........80.........90.........100.........110.........120........
 
   141........150...... ...160.........170.........180.........190.......
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Query Sequence  LGIVHRDLKPDNIMID. . . DKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKS
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Template Sequence  NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP
Template Known Secondary structure  TT
B



SGGGS
SSTT




TT
B

TT

B


S
S
GGG

T

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   129130.........140.........150.........160.........170.........180........
 
   198.200.........210.........220.........230.........240... ......250...
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Query Sequence  YDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPAPC. . . . GVSNELKDLL
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Template Sequence  Y. SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI
Template Known Secondary structure  B.
TSS
SS

SSTT




TTGGGGS
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   190 .........200.........210.........220.........230.........240........
 
   254.....260.........270........
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Query Sequence  SLLMTVNPKYRPTVTEVMKHPWLRG
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Template Sequence  DSMLTVNPKKRITADQALKVPWICN
Template Known Secondary structure  S
SSGGGS

TTST
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   249250.........260.........270...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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