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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank203Aligned Residues243
% Identity23%Templatec2qobA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ephrin receptor; PDBTitle: human epha3 kinase domain, base structure
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40........ .50.........60 .........70.........80
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Query Sequence  SQYKVVRTLGHGTYAKVLLAKHW. . . LTGTPVAVKVLL. . KNKPCFQPAMKEANIMKKIK
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Template Sequence  TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD
Template Known Secondary structure  GG
SSS
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TT

TT

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   619620.........630.........640.........650.........660.........670........
 
   81........90.........100.........110.........120.........130.........140
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Query Sequence  HPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSYCHG
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Template Sequence  HPNIIRLEGVVTKSKPVMIVTEMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD
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TT
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   679680.........690.........700.........710.........720.........730........
 
   141........150.........160.........170.........180.........190.........200
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Query Sequence  LGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKSYDG
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Template Sequence  MGYVHRDLAARNILINSNLVCKVSDFGLSRVLK. . . . . . . . . IPIRWTSPEAIAYRKF. T
Template Known Secondary structure  TT
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GGG
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   740.........750.........760.........770.. .......780........ .
 
   201........210....... ..220.........230....... ..240.........250........
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Query Sequence  TKSDLWALGVILYYMVV. GKVPFDSYIIPELQRQILAG. VYPAPCGVSNELKDLLSLLMT
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Template Sequence  SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQ
Template Known Secondary structure  TTT

TTTT

T



TT
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   803......810.........820.........830.........840.........850.........860..
 
   259260.........270.. ......
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Query Sequence  VNPKYRPTVTEVMK. . HPWLRG
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Template Sequence  KDRNNRPKFEQIVSILDKLIRN
Template Known Secondary structure  SSGGGS

S
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   863......870.........880....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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