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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank52Aligned Residues236
% Identity28%Templatec1k9aB_
PDB info PDB header:transferaseChain: B: PDB Molecule:carboxyl-terminal src kinase; PDBTitle: crystal structure analysis of full-length carboxyl-terminal2 src kinase at 2.5 a resolution
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80....
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Query Sequence  YSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKNKPCFQPAMKEANIMKKIKHPNI
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Template Sequence  MKELKLLQTIGKGEFGDVMLGDYR. . GNKVAVKCIKND. ATAQAFLAEASVMTQLRHSNL
Template Known Secondary structure  GGG

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   192.......200.........210..... ....220....... ..230.........240........
 
   85....90..... ....100.........110........ .120.........130.........140.
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Query Sequence  VSLLQVFETKT. RGYLIMELVEGQELYEYIKSSGH. . IEEDEARQIFLQILSAVSYCHGL
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Template Sequence  VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN
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TT
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   249250.........260.........270.........280.........290.........300........
 
   142.......150.........160.........170.........180.........190.........200.
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Query Sequence  GIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKSYDGT
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Template Sequence  NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAG. . . . . . . . KLPVKWTAPEALREKKF. ST
Template Known Secondary structure  T
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   309310.........320.........330.........340 .........350....... ..
 
   202.......210....... ..220.........230....... ..240.........250.........
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Query Sequence  KSDLWALGVILYYMVV. GKVPFDSYIIPELQRQILAG. VYPAPCGVSNELKDLLSLLMTV
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Template Sequence  KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHL
Template Known Secondary structure  TTT

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   366...370.........380.........390.........400.........410.........420.....
 
   260.........270..
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Query Sequence  NPKYRPTVTEVMK
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Template Sequence  DAATRPTFLQLRE
Template Known Secondary structure  SGGGS

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   426...430........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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