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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank123Aligned Residues252
% Identity34%Templatec3i6uA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk2; PDBTitle: structure and activation mechanism of the chk2 dna-damage checkpoint2 kinase
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60 .........70.
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Query Sequence  SPQPSNPEDGELYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLL. KNKPCFQPAMK
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Template Sequence  TVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGLNVET
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GGGS
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GGGGTT


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   205....210.........220.........230.........240.........250.........260....
 
   72.......80.........90.........100.........110.........120.........130.
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Query Sequence  EANIMKKIKHPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQI
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Template Sequence  EIEILKKLNHPCIIKIKNFFDAEDY. YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM
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SS.

TT
BGGGGTSSS



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   273......280.........290....... ..300.........310.........320.........330.
 
   132.......140.........150...... ...160.........170.........180........
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Query Sequence  LSAVSYCHGLGIVHRDLKPDNIMID. . . DKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFG
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Template Sequence  LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK. . . . . . . . . . . . ILGPTY
Template Known Secondary structure  TT


S


GGGSSSSSS



SSTTT............S


TT
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   332.......340.........350.........360.........370... ......
 
   189190.........200.........210.........220...... ...230.........240.. .
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Query Sequence  APELFLWKSYDGTKSDLWALGVILYYMVVGKVPFDSYI. IPELQRQILAGVYPAP. . . . C
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Template Sequence  LAPEVLVAGY. NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA
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TTTT

TT.SS
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SSS

TT




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   391........400 .........410.........420.........430.........440.........
 
   244.....250.........260.........270........
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Query Sequence  GVSNELKDLLSLLMTVNPKYRPTVTEVMKHPWLRG
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Template Sequence  EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD
Template Known Secondary structure  TS
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SSTTTS

SGGG

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   454.....460.........470.........480........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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