Return to main results Retrieve Phyre Job Id

Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank163Aligned Residues246
% Identity22%Templatec3plsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:macrophage-stimulating protein receptor; PDBTitle: ron in complex with ligand amp-pnp
Resolution2.24 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.. .......60 .........70.........80.
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Query Sequence  QYKVVRTLGHGTYAKVLLAKHWLTGT. . . PVAVKVLL. . KNKPCFQPAMKEANIMKKIKH
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Template Sequence  VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNH
Template Known Secondary structure  TT
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   1081........1090.........1100.........1110.........1120.........1130.........1140
 
   82.......90.. .......100.........110........ .120.........130.........
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Query Sequence  PNIVSLLQVFE. TKTRGYLIMELVEGQELYEYIKSSGH. IEEDEARQIFLQILSAVSYCH
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Template Sequence  PNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA
Template Known Secondary structure  TTB





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TT
B
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   1141........1150.........1160.........1170.........1180.........1190.........1200
 
   140.........150.........160.........170.. .......180.........190....
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Query Sequence  GLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQV. . . . . KPGDLLDEHCGAYAFGAPELFL
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Template Sequence  EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQ
Template Known Secondary structure  TT


S

SGGG
TT



TTSS
TTTTGGGG
S

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TT
GGGGS
T
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   1201........1210.........1220.........1230.........1240.........1250.........1260
 
   195....200.........210....... ..220.........230....... ..240.........250..
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Query Sequence  WKSYDGTKSDLWALGVILYYMVV. GKVPFDSYIIPELQRQILAG. VYPAPCGVSNELKDL
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Template Sequence  TYRF. TTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQV
Template Known Secondary structure  T


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TS

TTTTS
GGGTT





TT

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   1261... .....1270.........1280.........1290.........1300.........1310.........
 
   253......260.........270...
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Query Sequence  LSLLMTVNPKYRPTVTEVMKH
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Template Sequence  MQQCWEADPAVRPTFRVLVGE
Template Known Secondary structure  T
SSGGGS

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   1320.........1330.........1340
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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