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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank201Aligned Residues239
% Identity26%Templatec3fmeA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity mitogen-activated protein kinase kinase 6; PDBTitle: crystal structure of human mitogen-activated protein kinase kinase 62 (mek6) activated mutant (s207d, t211d)
Resolution2.26 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80....
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Query Sequence  YSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKNKPCFQPAMKEANIMKKIKHPNI
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Template Sequence  ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRNSQEQKRLLMDLDISMRTVDCPFT
Template Known Secondary structure  GGG
SSTTTT

TT


TTB
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   50.........60.........70.........80.........90.........100.........
 
   85....90.........100.........110........ .120.........130.........140.
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Query Sequence  VSLLQVFETKTRGYLIMELVEGQELYEYIKSSGH. . . IEEDEARQIFLQILSAVSYCHGL
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Template Sequence  VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK
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   113......120.........130.........140.........150.........160.........170..
 
   142.......150.........160.........170.........180.........190.........200
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Query Sequence  . GIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKSYDG
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Template Sequence  LSVIHRDVKPSNVLINALGQVKMCDFA. . . . . . . . . . . . . . GCKPYMAPERINPELNQYS
Template Known Secondary structure  S






SGGG

TT

B



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S
S

TT


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   173......180.........190......... 200.........210........
 
   201........210.........220...... ...230.........240... ......250.......
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Query Sequence  TKSDLWALGVILYYMVVGKVPFDSYI. . IPELQRQILAGVYPAPC. GVSNELKDLLSLLM
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Template Sequence  VKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCL
Template Known Secondary structure  TS
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S
S





TTTS
T
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   236...240.........250.........260.........270.........280.........290.....
 
   258.260.........270.......
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Query Sequence  TVNPKYRPTVTEVMKHPWLR
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Template Sequence  KKNSKERPTYPELMQHPFFT
Template Known Secondary structure 
SSGGGS

TTS
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   296...300.........310.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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