Return to main results Retrieve Phyre Job Id

Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank314Aligned Residues256
% Identity28%Templatec3coiA_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase 13; PDBTitle: crystal structure of p38delta kinase
Resolution2.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.........60 .........70....
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Query Sequence  NPEDGELYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLL. . . KNKPCFQPAMKEAN
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Template Sequence  NKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELL
Template Known Secondary structure  TTTT
SSTTTTSSTTSS
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   15....20.........30.........40.........50.........60.........70....
 
   75....80.........90.... .....100.........110.........120........
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Query Sequence  IMKKIKHPNIVSLLQVFETK. . . . . . TRGYLIMELVEGQELYEYIKSSGHIEEDEARQIF
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Template Sequence  LLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQ. . . KIMGLKFSEEKIQYLV
Template Known Secondary structure 


TTB


S
S
SSGGG





SGG...GTTTS


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   75....80.........90.........100.........110..... ....120.........130.
 
   129130.........140.........150.........160.........170.........180........
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Query Sequence  LQILSAVSYCHGLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFG
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Template Sequence  YQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHV. . . . . . . . . . VTRWYR
Template Known Secondary structure  TT


SS

GGG
TT


STT
TT

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SB

S
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   132.......140.........150.........160.........170..... ....180.
 
   189190.........200.........210.........220.........230.........240..
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Query Sequence  APELFLWKSYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPAP. . . . . .
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Template Sequence  APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK
Template Known Secondary structure 
S

S


TTSS
SSBSS

B

TT
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   190.........200.........210.........220.........230.........240.........
 
   243......250.........260.........270.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . CGVSNELKDLLSLLMTVNPKYRPTVTEVMKHPWLR
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Template Sequence  LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE
Template Known Secondary structure 
S
TS
B
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TTTT
TTS
S
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TTTS

TSGGGT
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   250.........260.........270.........280.........290.........300.........
 
   278.280......
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Query Sequence  GHCKGLTNI
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Template Conservation           
Template Sequence  PFRDPEEET
Template Known Secondary structure  TT

GGG

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   310........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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