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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank109Aligned Residues268
% Identity27%Templatec3p1aA_
PDB info PDB header:transferaseChain: A: PDB Molecule:membrane-associated tyrosine- and threonine-specific cdc2- PDBTitle: structure of human membrane-associated tyrosine- and threonine-2 specific cdc2-inhibitory kinase myt1 (pkmyt1)
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.
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Query Sequence  PAHIEEELPPPSPQPSNPEDGELYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLK
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Template Sequence  RGEASETLQSPGYDPSRPESF. FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMS
Template Known Secondary structure  S

S
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   85....90.........100..... ....110.........120.........130.........140...
 
   62.......70......... 80.........90.........100.........110.......
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Query Sequence  . . . NKPCFQPAMKEANIMKKI. KHPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSG
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Template Sequence  PFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGA
Template Known Secondary structure  S

S


TTB

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B
S
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   144.....150.........160.........170.........180.........190.........200...
 
   118.120.........130.........140.........150.........160.........170.......
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Query Sequence  HIEEDEARQIFLQILSAVSYCHGLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDL
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Template Sequence  SLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGVQE.
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SGGG
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   204.....210.........220.........230.........240.........250.........260..
 
   178.180.........190.........200.........210.........220.........230.......
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Query Sequence  LDEHCGAYAFGAPELFLWKSYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAG
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Template Sequence  . . . . . GDPRYMAPELLQGSY. . GTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLP
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GGG

GGGGGT

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   269270.........280... ......290.........300.........310.........320.
 
   238.240.........250.........260.........270.........
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Query Sequence  VYPAPCGVSNELKDLLSLLMTVNPKYRPTVTEVMKHPWLRGH
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Template Sequence  . PEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQP
Template Known Secondary structure  .TTS
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   322.......330.........340.........350.........360..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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