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Job DescriptionA0AUV4
Confidence98.85%DateTue Jul 30 13:10:30 BST 2013
Rank330Aligned Residues137
% Identity19%Templatec3lzhA_
PDB info PDB header:transferaseChain: A: PDB Molecule:aph(2")-id/aph(2")-iva; PDBTitle: crystal structure of aminoglycoside phosphotransferase aph(2")-2 id/aph(2")-iva
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80... ....
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Query Sequence  VRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKNKPCFQPAMKEANIMKKIKHPN. . . IVSL
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Template Sequence  IEISGEGNDCIAYEI. . . . . NGNFIFKFP. KHSRASINLLNEVTVLKTIHNELSLPIPEV
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   25....30......... 40........ .50.........60.........70........
 
   88.90....... ..100.........110.........120.........130.........140..
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Query Sequence  LQVFETKTRG. . . YLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSYCHGLG. .
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Template Sequence  VFTGXPSEXCQXSFAGFTKIKGVPLTPLLLKN. . LPKQSQDQAAKDLARFLSELHSINIS
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   7980.........90.........100.........110 .........120.........130......
 
   143...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IVHR
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Template Sequence  GFKSNLVLDFREKINEDNKKIKKLLSRELKGHQXKKVDDFYRDILDNEIYFKYYPCLIHN
Template Known Secondary structure  TS
GGGB

TTTTS
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   137..140.........150.........160.........170.........180.........190......
 
   147..150.........160.. .......170.....
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Query Sequence  DLKPDNIMIDDKGSIK. . IIDFGLSTQVKPG
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Template Sequence  DFSSDHILFDTEKNTICGIIDFGDAAISDPD
Template Known Secondary structure  S
SGGGTTTT


TT

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   197..200.........210.........220.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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