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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank97Aligned Residues313
% Identity35%Templatec3h4jB_
PDB info PDB header:transferaseChain: B: PDB Molecule:snf1-like protein kinase ssp2; PDBTitle: crystal structure of pombe ampk kdaid fragment
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   22.......30.........40.........50.........60 .........70.......
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Query Sequence  GELYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLL. . . . KNKPCFQPAMKEANIMK
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Template Sequence  KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLK
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STTTTTTT

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ST
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   28.30.........40.........50.........60.........70.........80.......
 
   78.80.........90.........100.........110.........120.........130.......
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Query Sequence  KIKHPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSY
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Template Sequence  LLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKK. RMTEDEGRRFFQQIICAIEY
Template Known Secondary structure  T


TTB


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.S

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   88.90.........100.........110.........120...... ...130.........140......
 
   138.140.........150.........160.........170.........180.........190.......
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Query Sequence  CHGLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKS
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Template Conservation                                                              
Template Sequence  CHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKL
Template Known Secondary structure  T





STTT
TT



SS
TBTTTTSBTT


TTSTTTS
GGGS

SG
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   147..150.........160.........170.........180.........190.........200......
 
   198.200.........210.........220.........230.........240.........250.......
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Query Sequence  YDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPAPCGVSNELKDLLSLLM
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Template Sequence  YAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMI
Template Known Secondary structure  GG
SS
SSB
SSSTT
B



SS




TTS
TTS
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   207..210.........220.........230.........240.........250.........260......
 
   258.260.........270.........280.........290.........300 .........310......
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Query Sequence  TVNPKYRPTVTEVMKHPWLRGHCKGLTNIHEEPVPVRPDPDIV. DAMQYIGFQAKDIRES
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Template Sequence  VADPMQRITIQEIRRDPWFNVNLPDYLRPMEEVQGSYADSRIVSKLGEAMGFSEDYIVEA
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SSGGGS

TT
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TT


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   267..270.........280.........290.........300.........310.........320......
 
   317..320.........330.....
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Query Sequence  LTKEKFNEMSAAYYLLEEQ
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Template Sequence  LRSDENNEVKEAYNLLHEN
Template Known Secondary structure  TTSSS

SSTT
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   327..330.........340.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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