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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank297Aligned Residues254
% Identity21%Templatec2qkwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase; PDBTitle: structural basis for activation of plant immunity by2 bacterial effector protein avrpto
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50.........60 .........70.....
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Query Sequence  SNPEDGELYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLL. KNKPCFQPAMKEANI
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Template Sequence  PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR. DGAKVALKRRTPESSQGIEEFETEIET
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S



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B
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   30.........40.........50.........60. ........70.........80........
 
   76...80.........90.........100.........110........ .120.........130.
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Query Sequence  MKKIKHPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGH. . . . IEEDEARQIFLQI
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Template Sequence  LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA
Template Known Secondary structure  GGS


TTB




TT



TT
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   8990.........100.........110.........120.........130.........140........
 
   132.......140.........150.........160.........170. ........180.........190
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Query Sequence  LSAVSYCHGLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQ. VKPGDLLDEHCGAYAFGAP
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Template Sequence  ARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLVVKGTLGYIDP
Template Known Secondary structure  TT
S


STT
TT




TT

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S
TTT

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   149150.........160.........170.........180.........190.........200........
 
   191........200.........210.........220.........230.....
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Query Sequence  ELFLWKSYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQIL. . . . . . . . . . . . . . .
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Template Sequence  EYFIKGRL. TEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV
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TT
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TTTT


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   211....... .220.........230.........240.........250.........260.........
 
   236...240.........250.........260.........270..
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Query Sequence  . . AGVYPAPCGVSNELKDLLSLLMTVNPKYRPTVTEVMK
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Template Sequence  DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLW
Template Known Secondary structure  SSS
TT
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SSGGGS

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   270.........280.........290.........300........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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