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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank12Aligned Residues252
% Identity37%Templatec3soaA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase type ii subunit PDBTitle: full-length human camkii
Resolution3.55 Å
Model Dimensions (Å)X:58.658 Y:61.429 Z:40.701

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60... ......70........
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Query Sequence  GELYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKNK. . . PCFQPAMKEANIMKK
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Template Sequence  TRFTEEYQLFEELGKGSVVRRCVK. . VLAGQEYAAMIINTKKLSARDHQKLEREARICRL
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..TTTTS
S
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   7..10.........20.........30 .........40.........50.........60....
 
   7980.........90.........100.........110.........120.........130........
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Query Sequence  IKHPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSYC
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Template Sequence  LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC
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BTTB


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B

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S


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   67..70.........80.........90.........100.........110.........120......
 
   139140.........150.........160 .........170... ......180.........190....
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Query Sequence  HGLGIVHRDLKPDNIMIDDKGS. . . IKIIDFGLSTQVK. PGDLLDEHCGAYAFGAPELFL
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Template Sequence  HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR
Template Known Secondary structure  TT
B



SSTTSBSSTT




SS
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TT

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S
S
GGG

T
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   127..130.........140.........150.........160.........170.........180......
 
   195....200.........210.........220.........230.........240... ......250
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Query Sequence  WKSYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPAPC. . . . GVSNELK
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Template Sequence  KDPY. GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK
Template Known Secondary structure  T

B.
TSS
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SST




TTTTTTS
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   187..190 .........200.........210.........220.........230.........240.....
 
   251........260.........270......
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Query Sequence  DLLSLLMTVNPKYRPTVTEVMKHPWL
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Template Sequence  DLINKMLTINPSKRITAAEALKHPWI
Template Known Secondary structure  S
SSTTTS

S
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   246...250.........260.........270.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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