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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank170Aligned Residues243
% Identity28%Templatec4ithB_
PDB info PDB header:transferase/transferase inhibitorChain: B: PDB Molecule:receptor-interacting serine/threonine-protein kinase 1; PDBTitle: crystal structure of rip1 kinase in complex with necrostatin-1 analog
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33...... 40.........50.........60 .........70.........80....
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Query Sequence  TLGHGTY. . . . . AKVLLAKHWLTGTPVAVKVLL. . . KNKPCFQPAMKEANIMKKIKHPNI
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Template Sequence  KMKSSDFLESAELKVSLAFHRTQGL. MIMKTVYKGPNCIEHNEALLEEAKMMNRLRHSRV
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GGGB
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B

TTT.S
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BTTB
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   11........20.........30..... ....40.........50.........60.........
 
   85....90.........100.........110.........120.........130.........140....
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Query Sequence  VSLLQVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSYCHGLGIV
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Template Sequence  VKLLGVIIEEGKYSLVMEYMEKGNLMHVLKAEMSTPLSVKGRIILEIIEGMAYLHGKGVI
Template Known Secondary structure 

TT

TT
BTSSS


TT

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   76...80.........90.........100.........110.........120.........130.....
 
   145....150.........160.........170... ......180.........190........ .200.
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Query Sequence  HRDLKPDNIMIDDKGSIKIIDFGLSTQVK. . PGDLLDEHCGAYAFGAPELFLWKSY. DGT
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Template Sequence  HKDLKPENILVDNDFHIKIADLGLASFKMWSKLNNEEHNEGTLYYMAPEHLNDVNAKPTE
Template Known Secondary structure 
S

SGGG
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TT
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GGGTS
GGGTT
TT



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   136...140.........150.........160.........170.........180.........190.....
 
   202.......210.........220.... .....230.........240 .........250......
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Query Sequence  KSDLWALGVILYYMVVGKVPFDS. YIIPELQRQILAGVYP. . . . APCGVSNELKDLLSLL
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Template Sequence  KSDVYSFAVVLWAIFANKEPYENAIAEQQLIMAIKSGNRPDVDDITEYCPREIISLMKLC
Template Known Secondary structure  SS
S
TT


TT



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   208.210.........220.........230.........240.........250.........260.......
 
   257..260.........270.. ....
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Query Sequence  MTVNPKYRPTVTEVMK. . HPWL
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Template Sequence  WEANPEARPTFPGIEEKFRPFY
Template Known Secondary structure  T
SSGGGS

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   268.270.........280.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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