Return to main results Retrieve Phyre Job Id

Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank5Aligned Residues271
% Identity29%Templatec1koaA_
PDB info PDB header:kinaseChain: A: PDB Molecule:twitchin; PDBTitle: twitchin kinase fragment (c.elegans), autoregulated protein2 kinase and immunoglobulin domains
Resolution3.30 Å
Model Dimensions (Å)X:50.041 Y:63.751 Z:42.603

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60 .........70..
Predicted Secondary structure 






















.

Query SS confidence 














































.











Query Sequence  PQPSNPEDGELYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLL. KNKPCFQPAMKE
Query Conservation    
           
 
   

 
 

 

 
    

  



 
 .           
Alig confidence 














































.











Template Conservation                
     

 
 

 

           


 
             
Template Sequence  PQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKE
Template Known Secondary structure 





B
S
GGGTTTTTTT


S
Template Predicted Secondary structure 




















Template SS confidence 



























































   5928.5930.........5940.........5950.........5960.........5970.........5980.......
 
   73......80.........90.........100.........110... ......120.........130.
Predicted Secondary structure 















.




Query SS confidence 








































.

















Query Sequence  ANIMKKIKHPNIVSLLQVFETKTRGYLIMELVEGQELYEYI. KSSGHIEEDEARQIFLQI
Query Conservation    

  
 




 
          





  

 
   
.     
       
  

Alig confidence 








































.

















Template Conservation 
  
  
 




             

 
    
 
          
 
        

Template Sequence  IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQV
Template Known Secondary structure  T

TTB

TT



S
BT
TTS
B
Template Predicted Secondary structure 



















Template SS confidence 



























































   5988.5990.........6000.........6010.........6020.........6030.........6040.......
 
   132.......140.........150........ .160.........170.........180.........
Predicted Secondary structure 


















..



















Query SS confidence 


























. .






























Query Sequence  LSAVSYCHGLGIVHRDLKPDNIMIDDK. . GSIKIIDFGLSTQVKPGDLLDEHCGAYAFGA
Query Conservation    

 


   







 



   ..  


 




             

  
 
Alig confidence 


























..






























Template Conservation     
  

   
 
 



 


            


                   
 
Template Sequence  CKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAA
Template Known Secondary structure  TT




GGGSSTTS




TT


TTS

S
TTT

Template Predicted Secondary structure 








































Template SS confidence 



























































   6048.6050.........6060.........6070.........6080.........6090.........6100.......
 
   190.........200.........210.........220.........230.........240.. ...
Predicted Secondary structure 




















....


Query SS confidence 




















































. . . .


Query Sequence  PELFLWKSYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPAP. . . . CGV
Query Conservation 

 
        
 








 




  

           
       
....   
Alig confidence 








.










































....


Template Conservation 

       .    





 


 

 
  

           
               
Template Sequence  PEVAEGKPV. GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGI
Template Known Secondary structure  T

B.
SS
SS

SST


S

GGGGG
Template Predicted Secondary structure 



.
























Template SS confidence 



























































   6108.6110...... ...6120.........6130.........6140.........6150.........6160......
 
   246...250.........260.........270.........280.....
Predicted Secondary structure 



















Query SS confidence 







































Query Sequence  SNELKDLLSLLMTVNPKYRPTVTEVMKHPWLRGHCKGLTN
Query Conservation 
     

   
  

  
 
  


 

           
Alig confidence 







































Template Conservation 
    


   
  

  
 
  
 
 

           
Template Sequence  SEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRD
Template Known Secondary structure 


SSGGGS

STTTS
TT

S

Template Predicted Secondary structure 
















Template SS confidence 







































   6167..6170.........6180.........6190.........6200......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D