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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank306Aligned Residues226
% Identity30%Templatec3ll6B_
PDB info PDB header:transferaseChain: B: PDB Molecule:cyclin g-associated kinase; PDBTitle: crystal structure of the human cyclin g associated kinase (gak)
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30 .........40.........50.........60 .........70.........80 .
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Query Sequence  YSQYKV. VRTLGHGTYAKVLLAKHWLTGTPVAVKVLL. KNKPCFQPAMKEANIMKKIK. H
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Template Sequence  LGELRLRVRRVLAEGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGH
Template Known Secondary structure  TT


TTT

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   25....30.........40.........50.........60.........70.........80....
 
   82.......90.... .....100.........110........ .120.........130.
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Query Sequence  PNIVSLLQVFETK. . . . . . . TRGYLIMELVEGQELYEYIKSSGH. . . IEEDEARQIFLQI
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Template Sequence  PNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQT
Template Known Secondary structure  TTB


GGGSTTSS


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S

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   86...90.........100.........110.........120.........130.........140.....
 
   132.......140.. .......150.........160.........170.........180.........
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Query Sequence  LSAVSYCHGLG. . IVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGA
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Template Sequence  CRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT. . . . . . . . . . . TISHYPDT
Template Known Secondary structure  TSSS

B




GGG

TTS
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TT
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TT



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   146...150.........160.........170.........180...... ...190....
 
   190........ .200.........210.........220.........230.........240........
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Query Sequence  PELFLWKSY. DGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPAPCGVSNE
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Template Sequence  PEIIDYSNFPIGEKQDIWALGCILYLLCFRQHPFES. . . . . . . . . . . . . . IPPHDTQYTV
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   219220.........230.........240.........250.... .....260....
 
   249250.........260.........270.....
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Query Sequence  LKDLLSLLMTVNPKYRPTVTEVMKHPW
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Template Sequence  FHSLIRAMLQVNPEERLSIAEVVHQLQ
Template Known Secondary structure  S
SSGGGS

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   278.280.........290.........300....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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