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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank43Aligned Residues277
% Identity30%Templatec1kobB_
PDB info PDB header:kinaseChain: B: PDB Molecule:twitchin; PDBTitle: twitchin kinase fragment (aplysia), autoregulated protein2 kinase domain
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60 .........70.
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Query Sequence  SPQPSNPEDGELYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLL. KNKPCFQPAMK
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Template Sequence  VPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKN
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SS
GGGTTTTTT



S
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   38.40.........50.........60.........70.........80.........90.......
 
   72.......80.........90.........100.........110....... ..120.........130
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Query Sequence  EANIMKKIKHPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSG. HIEEDEARQIFLQ
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Template Sequence  EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ
Template Known Secondary structure  TT

STTB


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BTT
TT



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   98.100.........110.........120.........130.........140.........150.......
 
   131........140.........150...... ...160.........170.........180........
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Query Sequence  ILSAVSYCHGLGIVHRDLKPDNIMID. . DKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFG
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Template Sequence  ACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFA
Template Known Secondary structure  TTT




GGGSSTT
S



TT


TTS
TTGGG
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   158.160.........170.........180.........190.........200.........210.......
 
   189190.........200.........210.........220.........230.........240... .
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Query Sequence  APELFLWKSYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPAPC. . . . G
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Template Sequence  APEIVDREPV. GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSS
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TT

B.
S

TT

SST




TTTTTT
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   218.220....... ..230.........240.........250.........260.........270......
 
   245....250.........260.........270.........280.........290
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Query Sequence  VSNELKDLLSLLMTVNPKYRPTVTEVMKHPWLRGHCKGLTNIHEEP
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Template Sequence  VSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSS
Template Known Secondary structure  S
TTS
SSGGGS

TTSS

TT





GG
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   277..280.........290.........300.........310.........320..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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