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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank160Aligned Residues250
% Identity28%Templatec1ua2A_
PDB info PDB header:cell cycle, transferaseChain: A: PDB Molecule:cell division protein kinase 7; PDBTitle: crystal structure of human cdk7
Resolution3.02 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.........80........
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Query Sequence  KVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKNKPCFQPAMKEANIMKKIKHPNIVSLL
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Template Sequence  EKLDFLGEGQFATVYKARDKNTNQIVAIKKIN. . . . . . RTALREIKLLQELSHPNIIGLL
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   13......20.........30.........40.... .....50.........60......
 
   8990.........100.........110.........120.........130.........140........
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Query Sequence  QVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSYCHGLGIVHRDL
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Template Sequence  DAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDL
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   7980.........90.........100.........110.........120.........130........
 
   149150.........160.........170.........180.........190.........200........
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Query Sequence  KPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKSYDGTKSDLWAL
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Template Sequence  KPNNLLLDENGVLKLADFGLAKSFGSPNRAYHQVVTRWYRAPELLFGARMYGVGVDMWAV
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GGG
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   139140.........150.........160.........170.........180.........190........
 
   209210.........220.........230.........240..
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Query Sequence  GVILYYMVVGKVPFDSYIIPELQRQILAGVYPAP. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  GCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHH
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   200.........210.........220.........230.........240.........250.........
 
   243......250.........260.........270.........280....
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Query Sequence  . . CGVSNELKDLLSLLMTVNPKYRPTVTEVMKHPWLRGHCKGLT
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Template Sequence  IFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTP
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   260.........270.........280.........290.........300...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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