02/08/2013 05:15:21 : INFO  : Run start: Fri Aug  2 05:15:21 BST 2013
02/08/2013 05:15:22 : INFO  : Initialised job
02/08/2013 05:15:23 : INFO  : Initialised job:
Sequence
>batch____
MPAHIEEELPPPSPQPSNPEDGELYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLL
KNKPCFQPAMKEANIMKKIKHPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGHIE
EDEARQIFLQILSAVSYCHGLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDE
HCGAYAFGAPELFLWKSYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYP
APCGVSNELKDLLSLLMTVNPKYRPTVTEVMKHPWLRGHCKGLTNIHEEPVPVRPDPDIV
DAMQYIGFQAKDIRESLTKEKFNEMSAAYYLLEEQALQREVRSTQAPTVSQVKAPFPSMD
AGEASCLKIKRSGSASILGRSVWPPSIDQEPAYVQKVRQRAGRRSSGHGLLFEANQMTPT
QDQHHIRAMSVPCMLSTSSISEESVSEKREENLSHIALAEDKPIRSRGWCRGIMRWTRRV
GNAIRTLCCCIPSRKTPQLGQSRVSPQK

02/08/2013 05:15:23 : INFO  : Checked sequence
02/08/2013 05:15:24 : INFO  : Finding homologues with PSI-BLAST
02/08/2013 05:15:24 : INFO  : PSI-BLAST 3 iterations
02/08/2013 05:17:55 : INFO  : PSI-BLAST 5 iterations
02/08/2013 05:22:31 : INFO  : Finished PSI-BLAST
02/08/2013 05:22:31 : INFO  : Running Buildali to generate a3m file
02/08/2013 07:26:01 : INFO  : Converting to HMM
02/08/2013 07:26:42 : INFO  : Calibrating HMM
02/08/2013 07:26:52 : INFO  : Searching HMM database
02/08/2013 07:35:38 : INFO  : Finished buildali
02/08/2013 07:35:38 : INFO  : Predicting secondary structure
02/08/2013 07:35:38 : INFO  : Predicted secondary structure (PSI-Pred)
02/08/2013 07:35:38 : INFO  : Predicting Disordered regions
02/08/2013 07:35:38 : INFO  : Predicted Disorder (Disopred)
02/08/2013 07:35:38 : INFO  : Running memsat_svm check
02/08/2013 07:35:58 : INFO  : Globular protein
02/08/2013 07:35:58 : INFO  : Predicted Transmembrane (memsat_svm) ID '56c46adebed88290'
02/08/2013 07:35:58 : INFO  : Initialising fold library search
02/08/2013 07:35:58 : INFO  : Initialised search input
02/08/2013 07:35:58 : INFO  : Building Ensemble models
02/08/2013 07:35:59 : INFO  : Building hh.c3pfqA_.model.1.pdb
02/08/2013 07:35:59 : INFO  : Building hh.c3nyoB_.model.2.pdb
02/08/2013 07:36:00 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/56c46adebed88290/hh.c3nyoB_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/56c46adebed88290/c3nyoB_.2.pdb
02/08/2013 07:36:00 : INFO  : Building hh.c2acxB_.model.3.pdb
02/08/2013 07:36:00 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/56c46adebed88290/hh.c2acxB_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/56c46adebed88290/c2acxB_.3.pdb
02/08/2013 07:36:00 : INFO  : Building hh.c1ym7C_.model.4.pdb
02/08/2013 07:36:01 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/56c46adebed88290/hh.c1ym7C_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/56c46adebed88290/c1ym7C_.4.pdb
02/08/2013 07:36:01 : INFO  : Building hh.c1koaA_.model.5.pdb
02/08/2013 07:36:01 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/56c46adebed88290/hh.c1koaA_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/56c46adebed88290/c1koaA_.5.pdb
02/08/2013 07:36:01 : INFO  : Building hh.c3c4wB_.model.6.pdb
02/08/2013 07:36:02 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/56c46adebed88290/hh.c3c4wB_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/56c46adebed88290/c3c4wB_.6.pdb
02/08/2013 07:36:02 : INFO  : Building c3pfqA_.1.pdb
02/08/2013 07:36:02 : INFO  : Building c3nyoB_.2.pdb
02/08/2013 07:36:03 : INFO  : Building c2acxB_.3.pdb
02/08/2013 07:36:03 : INFO  : Building c1ym7C_.4.pdb
02/08/2013 07:36:04 : INFO  : Building c1koaA_.5.pdb
02/08/2013 07:36:04 : INFO  : Building c3c4wB_.6.pdb
02/08/2013 07:36:05 : INFO  : Building c3qa8H_.7.pdb
02/08/2013 07:36:06 : INFO  : Building c3c4yA_.8.pdb
02/08/2013 07:36:06 : INFO  : Building c3q5iA_.9.pdb
02/08/2013 07:36:07 : INFO  : Building c4im2A_.10.pdb
02/08/2013 07:36:07 : INFO  : Building c3qa8A_.11.pdb
02/08/2013 07:36:08 : INFO  : Building c3soaA_.12.pdb
02/08/2013 07:36:10 : INFO  : Building c2fo0A_.13.pdb
02/08/2013 07:36:11 : INFO  : Building c3tkuB_.14.pdb
02/08/2013 07:36:11 : INFO  : Building c3ckxA_.15.pdb
02/08/2013 07:36:11 : INFO  : Building c2c30A_.16.pdb
02/08/2013 07:36:12 : INFO  : Building d2j4za1.17.pdb
02/08/2013 07:36:12 : INFO  : Building c4fijA_.18.pdb
02/08/2013 07:36:12 : INFO  : Building c1oplA_.19.pdb
02/08/2013 07:36:13 : INFO  : Building c2vwiC_.20.pdb
02/08/2013 07:36:25 : INFO  : Finished HH model building
02/08/2013 07:36:25 : WARN  : Set python to /bmm/www/servers/phyre2/bin//python2.7/2.7.2/bin/python2.7
02/08/2013 07:36:31 : INFO  : html domain output complete ID '56c46adebed88290'
02/08/2013 08:29:31 : INFO  : Run end  : Fri Aug  2 08:29:31 BST 2013
