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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank288Aligned Residues227
% Identity27%Templatec3alnB_
PDB info PDB header:transferaseChain: B: PDB Molecule:dual specificity mitogen-activated protein kinase kinase 4; PDBTitle: crystal structure of human non-phosphorylated mkk4 kinase domain2 complexed with amp-pnp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60 .........70.........80.
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Query Sequence  YSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLL. . . KNKPCFQPAMKEANIMKKIKH
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Template Sequence  AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDC
Template Known Secondary structure  TTS
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   99100.........110.........120.........130.........140.........150........
 
   82.......90.........100.........110........ .120.........130.......
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Query Sequence  PNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGH. . . . IEEDEARQIFLQILSAVSY
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Template Sequence  PYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNH
Template Known Secondary structure  TTB

TT


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   159160.........170.........180.........190.........200.........210........
 
   138.140. ........150.........160.........170.........180.........190......
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Query Sequence  CHGL. GIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWK
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Template Sequence  LKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS. . . . . . . . . . . . . . . . . . . . . . . . . . G
Template Known Secondary structure  TTS






SGGGB
B
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B


SGG..........................G
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   219220.........230.........240.........250. .
 
   197..200.........210.........220.........230.........240.........250......
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Query Sequence  SYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPAPCGVSNELKDLLSLL
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Template Sequence  QLYDVRSDVWSLGITLYELATGRFPYPDPP. . . . . . . . . QLSNSEEREFSPSFINFVNLC
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   253......260.........270.........280.. .......290.........300...
 
   257..260.........270.........280......
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Query Sequence  MTVNPKYRPTVTEVMKHPWLRGHCKGLTNI
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Template Sequence  LTKDESKRPKYKELLKHPFILMYEERAVEV
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   348.350.........360.........370.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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