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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank47Aligned Residues245
% Identity24%Templatec2j0kB_
PDB info PDB header:transferaseChain: B: PDB Molecule:focal adhesion kinase 1; PDBTitle: crystal structure of a fragment of focal adhesion kinase2 containing the ferm and kinase domains.
Resolution3.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.. .......60 ........
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Query Sequence  PQPSNPEDGELYSQYKVVRTLGHGTYAKVLLAKHWLTGT. . . PVAVKVLL. . KNKPCFQP
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Template Sequence  TMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK
Template Known Secondary structure  S



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   408.410.........420.........430.........440.........450.........460.......
 
   6970.........80.........90.........100.........110....... ..120.......
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Query Sequence  AMKEANIMKKIKHPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSG. HIEEDEARQI
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Template Sequence  FLQEALTMRQFDHPHIVKLIGVITEN. PVWIIMELCTLGELRSFLQVRKFSLDLASLILY
Template Known Secondary structure  TT


TTB


SS.S


TT
BTTTT

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   468.470.........480.........490... ......500.........510.........520......
 
   128.130.........140.........150.........160.........170.........180.......
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Query Sequence  FLQILSAVSYCHGLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAF
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Template Sequence  AYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSR. . . . . . . . . . . . LPIKW
Template Known Secondary structure  TTT


S

SGGGTT






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   527..530.........540.........550.........560......... 570....
 
   188.190.........200.........210....... ..220.........230....... ..240.....
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Query Sequence  GAPELFLWKSYDGTKSDLWALGVILYYMVV. GKVPFDSYIIPELQRQILAG. VYPAPCGV
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Template Sequence  MAPESINFRRF. TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC
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TTS

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TT
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   589590......... 600.........610.........620.........630.........640.......
 
   246...250.........260.........270..
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Query Sequence  SNELKDLLSLLMTVNPKYRPTVTEVMK
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Template Sequence  PPTLYSLMTKCWAYDPSRRPRFTELKA
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TT
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   648.650.........660.........670....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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