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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank296Aligned Residues224
% Identity19%Templatec4azsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:methyltransferase wbdd; PDBTitle: high resolution (2.2 a) crystal structure of wbdd.
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30...... ...40.
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Query Sequence  PPPSPQPSNPEDGELYSQYKVVRTLGH. . . . . . . . . . . . . . . . . . . . . . GTYAK. . . . . .
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Template Sequence  PFYWGVSQPDDPRELIEQCAFYRLIGEFDTHLSPVPRPMYLVSNHRVLINDFNQPFQHWQ
Template Known Secondary structure  SSGGGGGS
SSGGGGTTTSS

SSSS

SSTT
S
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   167..170.........180.........190.........200.........210.........220......
 
   42.......50.........60.. .......70......... 80.......
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Query Sequence  . . VLLAKHWLTGTPVAVKVLLKN. . . . . . . . . . . KPCFQPAMKEANIMKKI. KHPNIVSL
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Template Sequence  NQPYRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAV
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   227..230.........240.........250.........260.........270.........280......
 
   88.90.........100.........110.........120.........130.........140.......
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Query Sequence  LQVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSYCHGLGIVHRD
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Template Sequence  LAHGENAQSGWLVMEKLPGRLLSDMLAAGEEID. . . REKILGSLLRSLAALEKQGFWHDD
Template Known Secondary structure 
SS


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   295....300.........310.........320....... ..330.........340.........350.
 
   148.150.........160.........170..... ....180.........190........ .200
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Query Sequence  LKPDNIMIDDKGSIKIIDFGLSTQVKPG. . . . . DLLDEHCGAYAFGAPELFLWKSY. . DG
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Template Sequence  VRPWNVMVDARQHARLIDFGSIVTTPSWPTNLVQSFFVFVNELFFNLPQPWSNWLYAVWQ
Template Known Secondary structure 

GGG
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   352.......360.........370.........380.........390.........400.........410.
 
   201........210....... ..220.........230......
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Query Sequence  TKSDLWALGVILYYMVV. GKVPFDSYIIPELQRQILA
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Template Sequence  EPVERWNFVLLLALFEKKAKLPSAEQQRGATEQWIIA
Template Known Secondary structure  S
GGG
STGGGS

GGGSS

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   432.......440.........450.........460........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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