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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank217Aligned Residues251
% Identity27%Templatec3zosA_
PDB info PDB header:transferaseChain: A: PDB Molecule:epithelial discoidin domain-containing receptor 1; PDBTitle: structure of the ddr1 kinase domain in complex with ponatinib
Resolution1.92 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40........ .50.........60 ......
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Query Sequence  YSQYKVVRTLGHGTYAKVLLAKHW. . . . . . . . . . . . . . . . LTGTPVAVKVLL. . KNKPCF
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Template Sequence  RSRLRFKEKLGEGQFGEVHLCEVDSPQDLVSLDFPLNVRKGHPLLVAVKILRPDATKNAR
Template Known Secondary structure  GGGTTSSGGGG
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   607..610.........620.........630.........640.........650.........660......
 
   67..70.........80.........90.........100.........110........
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Query Sequence  QPAMKEANIMKKIKHPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGH. . . . . . . .
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Template Sequence  NDFLKEVKIMSRLKDPNIIRLLGVCVQDDPLCMITDYMENGDLNQFLSAHQLEDAAQGPT
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   667..670.........680.........690.........700.........710.........720......
 
   119120.........130.........140.........150.........160.........170........
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Query Sequence  IEEDEARQIFLQILSAVSYCHGLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLL
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Template Sequence  ISYPMLLHVAAQIASGMRYLATLNFVHRDLATRNCLVGENFTIKIADFGMSRNLYAGDYY
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   738.740.........750.........760.........770.........780.........790.......
 
   179180. ........190.........200.........210....... ..220.........230...
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Query Sequence  DEH. . . CGAYAFGAPELFLWKSYDGTKSDLWALGVILYYMVV. . GKVPFDSYIIPELQRQ
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Template Sequence  RVQGRAVLPIRWMAWECILMGKF. TTASDVWAFGVTLWEVLMLCRAQPFGQLTDEQVIEN
Template Known Secondary structure  TT
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   798.800.........810.........820 .........830.........840.........850......
 
   234.. ...240.........250.........260.........270........
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Query Sequence  ILA. . . . . . . . GVYPAPCGVSNELKDLLSLLMTVNPKYRPTVTEVMKHPWLRG
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Template Sequence  AGEFFRDQGRQVYLSRPPACPQGLYELMLRCWSRESEQRPPFSQL. . HRFLAE
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   857..860.........870.........880.........890.........900. ......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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