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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank240Aligned Residues233
% Identity25%Templatec2h34B_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase pkne; PDBTitle: apoenzyme crystal structure of the tuberculosis serine/threonine2 kinase, pkne
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60 .........70.........80.
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Query Sequence  SQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLL. . . . KNKPCFQPAMKEANIMKKIKH
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Template Sequence  GPYRLRRLVGRGGXGDVYEAEDTVRERIVALKLXSETLSSDPVFRTRXQREARTAGRLQE
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   14.....20.........30.........40.........50.........60.........70...
 
   82.......90.........100.........110.........120.........130.........140.
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Query Sequence  PNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSYCHGL
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Template Sequence  PHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAA
Template Known Secondary structure  TTB

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   74.....80.........90.........100.........110.........120.........130...
 
   142.......150.........160.........170.........180.........190.........200.
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Query Sequence  GIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKSYDGT
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Template Sequence  GATHRDVKPENILVSADDFAYLVDFGI. . . . . . . . . . . . . . GTLYYXAPERF. . . . . SEY
Template Known Secondary structure  T






GGG
GGG

SSB
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   134.....140.........150.........160 .........170. ...
 
   202.......210.........220.........230.........240 .........250........
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Query Sequence  KSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYP. . . APCGVSNELKDLLSLLMT
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Template Sequence  RADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPRPSTVRPGIPVAFDAVIARGXA
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GGGTSTT

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   195....200.........210.........220.........230.........240.........250....
 
   259260.... .....270.. .....
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Query Sequence  VNPKYR. PTVTEVMK. . HPWLR
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Template Sequence  KNPEDRYVTCGDLSAAAHAALA
Template Known Secondary structure  SSGGGS
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   255....260.........270......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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