Return to main results Retrieve Phyre Job Id

Job DescriptionA0AUV4
Confidence98.38%DateTue Jul 30 13:10:30 BST 2013
Rank341Aligned Residues124
% Identity19%Templatec3mesB_
PDB info PDB header:transferaseChain: B: PDB Molecule:choline kinase; PDBTitle: crystal structure of choline kinase from cryptosporidium2 parvum iowa ii, cgd3_2030
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40...... ...50.........60.........70......... 80.......
Predicted Secondary structure 


..








.






Query SS confidence 















. .
































.







Query Sequence  VRTLGHGTYAKVLLAK. . HWLTGTPVAVKVLLKNKPCFQPAMKEANIMKKI. KHPNIVSL
Query Conservation     

 
 

 

 
 ..   

  



 
            
  

  
. 




 
Alig confidence 















..
















..













.







Template Conservation 
  
 

 

  
 
          




 
   .. 
 
  
   
  
   
  
 
Template Sequence  VKQIFSGLTNQLFVVSIVNELKHPRILFRIYGKHV. . FYDSKVELDVFRYLSNINIAPNI
Template Known Secondary structure 


SSS





S




..


TTSS

Template Predicted Secondary structure 
















..







Template SS confidence 



























































   75....80.........90.........100......... 110.........120.........130..
 
   88.90.........100.........110.........120.........130.........140..
Predicted Secondary structure 


















.....
Query SS confidence 






















































. . . . .
Query Sequence  LQVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSYCHGLG. . . . .
Query Conservation            





  

 
   
     
       
  

  

 


   .....
Alig confidence 





....











........
























.....
Template Conservation        ....  
 
 
 
  
........    
        

  

 

        
Template Sequence  IADFPE. . . . GRIEEFIDGEPL. . . . . . . . TTKQLQLTHICVEVAKNMGSLHIINSKRAD
Template Known Secondary structure  TT....


S
........
TTGGGSGGGTS
TT
Template Predicted Secondary structure 


....






........










Template SS confidence 



























































   140..... ....150....... ..160.........170.........180.......
 
  
Predicted Secondary structure  ............................................................
Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  FPSRFDKEPILFKRIYLWREEAKIQVSKNNQIDKELYSKILEEIDQLEELIMGGEKFSME
Template Known Secondary structure  S
TTS

S

T




GGGTTSS


Template Predicted Secondary structure 









Template SS confidence 



























































   188.190.........200.........210.........220.........230.........240.......
 
   143......150.........160.........
Predicted Secondary structure  ...............


















Query SS confidence  . . . . . . . . . . . . . . .


























Query Sequence  . . . . . . . . . . . . . . . IVHRDLKPDNIMIDDKGSIKIIDFGLS
Query Conservation  ...............







 



     


 




Alig confidence  ...............
















.








Template Conservation                

 
 

   


     .
 






Template Sequence  RALELKLYSPAFSLVFAHNDLQENNLLQTQNN. IRMIDYEYS
Template Known Secondary structure  TT
GGG

S


GGG
SS
.


TT
Template Predicted Secondary structure 

















.
Template SS confidence 









































   249250.........260.........270.........280 .........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D