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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank140Aligned Residues268
% Identity15%Templatec3q60A_
PDB info PDB header:transferaseChain: A: PDB Molecule:rop5b; PDBTitle: crystal structure of virulent allele rop5b pseudokinase domain bound2 to atp
Resolution1.72 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60 ....
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Query Sequence  LPPPSPQPSNPEDGELYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLL. . . . KNKP
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Template Sequence  WPQNAETTVDSLLSQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRS
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SSSSTTT


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STT
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   215....220.........230.........240.........250.........260.........270....
 
   65....70.........80.........90.. .......100.........110.
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Query Sequence  CFQPAMKEANIMKKIKHPNIVSLLQVFE. . . . . . . . . . . . . TKTRGYLIMELVEGQELYE
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Template Sequence  ELERLHEATFAAARLLGRLLLPSDAVAVQSQPPFAQLSPGYAVANYLLLMPAA. SVDLEL
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B



TTS
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   275....280.........290.........300.........310.........320....... ..330...
 
   112... ....120.........130.........140.........150.........160....
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Query Sequence  YIKS. . . . . . . SGHIEEDEARQIFLQILSAVSYCHGLGIVHRDLKPDNIMIDDKGSIKII
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Template Sequence  LFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLG
Template Known Secondary structure  S



TTTT
SGGG
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   347..350.........360.........370.........380.........390.........400......
 
   165....170.........180.........190.........200.........210.........220....
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Query Sequence  DFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKSYDGTKSDLWALGVILYYMVVGKVPFDS
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Template Sequence  DVSALWKVGTRGPASSVPVTYAPREFLNASTATF. THALNAWQLGLSIYRVWCLFLPFGL
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GGGTT
GGGS
GGG

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   407..410.........420.........430.........440 .........450.........460.....
 
   225....230.........240... ......250.........260.........270.....
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Query Sequence  YIIPELQRQILAGVYPAPC. . . . . . . . . GVSNELKDLLSLLMTVNPKYRPTVTEVMKHPW
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Template Sequence  VTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPE
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   466...470.........480.........490.........500.........510.........520.....
 
   276..
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Query Sequence  LRG
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Template Sequence  FLQ
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   526..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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