Return to main results Retrieve Phyre Job Id

Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank249Aligned Residues244
% Identity18%Templatec2jiiA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase vrk3 molecule: vaccinia PDBTitle: structure of vaccinia related kinase 3
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60...... ...70..
Predicted Secondary structure 














...........
Query SS confidence 










































. . . . . . . . . . .





Query Sequence  LYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKNKPCF. . . . . . . . . . . QPAMKE
Query Conservation      
 
   

 
 

 

 
    

  



 
       ...........     
Alig confidence 


























...












...........





Template Conservation      
 
   

 
  
 

       ... 



                      
  
Template Sequence  SGRQWKLKSFQTRDNQGILYEAAPTSK. . . FSLKLDAKDGRLFNEQNFFQRAAKPLQVNK
Template Known Secondary structure  TS
TT


...TTST

Template Predicted Secondary structure 







...



Template SS confidence 



























































   162.......170.........180........ .190.........200.........210........
 
   73......80.........90 .........100.........110........ .120.........
Predicted Secondary structure 







.










..

Query SS confidence 

















.



























. .










Query Sequence  ANIMKKIKHPNIVSLLQV. FETKTRGYLIMELVEGQELYEYIKSSGH. . IEEDEARQIFL
Query Conservation    

  
 




 
   .       





  

 
   
     ..
       
  
Alig confidence 

















.













.












..










Template Conservation             
               

 
  .   
                   
  
Template Sequence  WKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL. GRSLQSALDVSPKHVLSERSVLQVAC
Template Known Secondary structure  TT
TT
S




TTT

.
SGGG


Template Predicted Secondary structure 














.









Template SS confidence 



























































   230.........240.........250.........260.. .......270.........280........
 
   130.........140.........150.........160.. .......170.........180.
Predicted Secondary structure 




















..











......
Query SS confidence 
































. .


















. . . . . .
Query Sequence  QILSAVSYCHGLGIVHRDLKPDNIMIDDKGSIK. . IIDFGLSTQVKPGDLLDEH. . . . . .
Query Conservation 

  

 


   







 



     

..
 




            ......
Alig confidence 
































..


















......
Template Conservation 

  

  

  








 



         
 


 
                  
Template Sequence  RLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRS
Template Known Secondary structure  TT
B
S


GGGTT

GGG
B
SSGGG





TTSS
Template Predicted Secondary structure 

























Template SS confidence 



























































   289290.........300.........310.........320.........330.........340........
 
   182.......190.........200.........210.........220...... ...230....
Predicted Secondary structure  ..



















.....
Query SS confidence  . .












































. . . . .







Query Sequence  . . CGAYAFGAPELFLWKSYDGTKSDLWALGVILYYMVVGKVPFDSYI. . . . . IPELQRQI
Query Conservation  .. 

  
 


 
        
 








 




  

    .....       
Alig confidence  ..
















.


























.....







Template Conservation     

  
 


       .    

 


  
  

 
  
                  
Template Sequence  PHEGDLEFISMDLHKGCGP. SRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKF
Template Known Secondary structure  TT
S
TTT

TT


.
S

TTGGGTT
Template Predicted Secondary structure 













.











Template SS confidence 



























































   349350.........360....... ..370.........380.........390.........400.......
 
   235....240.... .....250.........260.........270..
Predicted Secondary structure 








......









Query SS confidence 









. . . . . .



























Query Sequence  LAGVYPAPCG. . . . . . VSNELKDLLSLLMTVNPKYRPTVTEVMK
Query Conservation         
  ...... 
     

   
  

  
 
  


 
Alig confidence 









......



























Template Conservation                          
          

    
  
Template Sequence  VDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN
Template Known Secondary structure  S



TTS



T

TT



Template Predicted Secondary structure 














Template SS confidence 











































   408.410.........420.........430.........440.........450.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D