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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank6Aligned Residues272
% Identity32%Templatec3c4wB_
PDB info PDB header:transferaseChain: B: PDB Molecule:rhodopsin kinase; PDBTitle: crystal structure of g protein coupled receptor kinase 1 bound to atp2 and magnesium chloride at 2.7a
Resolution2.70 Å
Model Dimensions (Å)X:60.169 Y:45.368 Z:41.915

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60... ......70.........80
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Query Sequence  YSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKNK. . . . PCFQPAMKEANIMKKIK
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Template Sequence  EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH
Template Known Secondary structure  GGG
SSSTTT

TT


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   184.....190.........200.........210.........220.........230.........240...
 
   81........90.........100.........110... ......120.........130......
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Query Sequence  HPNIVSLLQVFETKTRGYLIMELVEGQELYEYI. . . . KSSGHIEEDEARQIFLQILSAVS
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Template Sequence  SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE
Template Known Secondary structure 
TTB


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S

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   244.....250.........260.........270.........280.........290.........300...
 
   137..140.........150.........160.........170...... ...180.........190.....
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Query Sequence  YCHGLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGD. LLDEHCGAYAFGAPELFLW
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Template Sequence  HLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG
Template Known Secondary structure  TT




GGG
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TT


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B



S
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   304.....310.........320.........330.........340.........350.........360...
 
   196...200.........210.........220..... ....230.........240.........250.
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Query Sequence  KSYDGTKSDLWALGVILYYMVVGKVPFDSY. . . . IIPELQRQILAGVYPAPCGVSNELKD
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Template Sequence  EEY. DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKD
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B.
TSS
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   364.. ...370.........380.........390.........400.........410.........420..
 
   252.......260..... ....270.........280.........290.......
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Query Sequence  LLSLLMTVNPKYRP. . . . . TVTEVMKHPWLRGHCKGLTNIHEEPVPVRPDP
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Template Sequence  FCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDS
Template Known Secondary structure  S
SSGGGS


BTTBSTTGGGSGGGTT

T
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   423......430.........440.........450.........460.........470...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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