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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank169Aligned Residues256
% Identity13%Templatec3vwaA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:cytoplasmic export protein 1; PDBTitle: crystal structure of cex1p
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30... ......40.........50.........60.........70....
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Query Sequence  PSNPEDGELYSQYKVVRT. LGHGTYAKVLLAKHWLTGTPVAVKVLLKNKPCFQPAMKEAN
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Template Sequence  PLHXSISNFQFPYTIEETAITETALWQCFDGTRKADSLPVTVFKAKRSPENESLILNAVH
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   5....10.........20.........30.........40.........50.........60....
 
   75....80.........90.. .......100.........110.........120.........130...
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Query Sequence  IMKKIKHPNIVSLLQVFE. TKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILS
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Template Sequence  KSKILKIPGLCTVLETFDSDPQSTFIVTERVVPFPWDNLGSL. . SQNKFGVELGISQLLA
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   65....70.........80.........90.........100...... ...110.........120..
 
   134.....140.........150.........160.........170......... 180.........190..
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Query Sequence  AVSYCHGLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLD. EHCGAYAFGAPEL
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Template Sequence  TLGFLK. . NFVLGTLSKDSVFINIKGEWVLFGLELCSSKEGLSAFEFASRARSYYNIIGS
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   123..... .130.........140.........150.........160.........170.........180
 
   193......200.........210.........220.........230.........240..
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Query Sequence  FLWKSYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPAP. . . . . . . . . .
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Template Sequence  QLPCED. PNTIDSXGLGLLIKSLXAPSCLPKDWIVNVNXISDGKITIENFRKRLENTETW
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   181..... ...190.........200.........210.........220.........230.........
 
   243......250.........260.........270......
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Query Sequence  . CGVSNELKDLLSLLMTVNPKYRPTVTEVMKHPWL
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Template Sequence  RSNPLINFYQELRELHIKDPQGKLVVXSNLENLYL
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   240.........250.........260.........270....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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