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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank22Aligned Residues256
% Identity35%Templated1phka_
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.. .......70...
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Query Sequence  LYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKN. . . . . . . . . . KPCFQPAMKEA
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Template Sequence  FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV
Template Known Secondary structure 
TTT
SSTTTTTT
STT

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   15....20.........30.........40.........50.........60.........70....
 
   74.....80 .........90.........100.........110.........120.........130..
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Query Sequence  NIMKKIK. HPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQIL
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Template Sequence  DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL
Template Known Secondary structure  TT
TTB


SS

TT
BSS

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   75....80.........90.........100.........110.........120.........130....
 
   133......140.........150.........160.........170.........180.........190..
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Query Sequence  SAVSYCHGLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPEL
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Template Sequence  EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEI
Template Known Secondary structure  TT
S

SGGG
TT




TT


TT

B



S
GGG

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   135....140.........150.........160.........170.........180.........190....
 
   193. .....200.........210.........220.........230.........240...
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Query Sequence  FL. . . . . WKSYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPAPC. . . .
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Template Sequence  IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWD
Template Known Secondary structure 
TTS

B
TSS
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SST




TTTGG
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   195....200.........210.........220.........230.........240.........250....
 
   244.....250.........260.........270.........
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Query Sequence  GVSNELKDLLSLLMTVNPKYRPTVTEVMKHPWLRGH
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Template Sequence  DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY
Template Known Secondary structure  GS


SSGGGS

TTSGGG
TT
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   255....260.........270.........280.........290
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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