Return to main results Retrieve Phyre Job Id

Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank74Aligned Residues248
% Identity35%Templatec2j2iB_
PDB info PDB header:transferaseChain: B: PDB Molecule:proto-oncogene serine/threonine-protein kinase pim-1; PDBTitle: crystal structure of the humab pim1 in complex with2 ly333531
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60... ......70......
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Query Sequence  LYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKNK. . . . . . . PCFQPAMKEANIM
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Template Sequence  LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL
Template Known Secondary structure  TTTTTTGGG



TT

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   34.....40.........50.........60.........70.........80.........90...
 
   77..80 .........90.........100...... ...110.........120.........130...
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Query Sequence  KKIK. . HPNIVSLLQVFETKTRGYLIMELVEG. QELYEYIKSSGHIEEDEARQIFLQILS
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Template Sequence  KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE
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SSS
SB


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S

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   94.....100.........110.........120.........130.........140.........150...
 
   134.....140.........150...... ...160.........170.........180.........190..
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Query Sequence  AVSYCHGLGIVHRDLKPDNIMID. DKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPEL
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Template Sequence  AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD. GTRVYSPPEW
Template Known Secondary structure  TT



SGGGTTTT


TT


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B



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   154.....160.........170.........180.........190.........200.. .......210..
 
   193......200.........210.........220.........230.........240.........250..
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Query Sequence  FLWKSYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPAPCGVSNELKDL
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Template Sequence  IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD. . . . . . EEIIGGQVFFRQRVSSECQHL
Template Known Secondary structure  S
B
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   213......220.........230.........240..... ....250.........260......
 
   253......260.........270........
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Query Sequence  LSLLMTVNPKYRPTVTEVMKHPWLRG
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Template Sequence  IRWCLALRPSDRPTFEEIQNHPWMQD
Template Known Secondary structure  T
SSGGGS

TSGGGSS
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   267..270.........280.........290..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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