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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank243Aligned Residues247
% Identity19%Templatec2v62A_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase vrk2; PDBTitle: structure of vaccinia-related kinase 2
Resolution1.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30...... ...40.........50.........60. ....
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Query Sequence  LYSQYKVVRTLGH. . . . GTYAKVLLAKHWLTGTPVAVKVLLK. . . . . . . . . . . . . . NKPC
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Template Sequence  FPEGKVLDDMEGNQWVLGKKILIYLAFPTNKPEKDARHVVKVEYQEGPLFSELKFYQRVA
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   15....20.........30.........40.........50.........60.........70....
 
   66...70.........80.........90. ........100.........110.........120.
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Query Sequence  FQPAMKEANIMKKIKHPNIVSLLQVF. . . . ETKTRGYLIMELVEGQELYEYIKSSGHIEE
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Template Sequence  KKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL. GIDLQKISGQNGTFKK
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BGGGB

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   82.......90.........100.........110.........120.... .....130.........140
 
   122.......130.........140.........150....... ..160.........170....
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Query Sequence  DEARQIFLQILSAVSYCHGLGIVHRDLKPDNIMIDD. . KGSIKIIDFGLSTQVKP. . . . .
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Template Sequence  STVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHK
Template Known Secondary structure  TT
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SGGGSSSTTS


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   141........150.........160.........170.........180.........190.........200
 
   175....180.........190.........200.........210.........220.........230.
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Query Sequence  . . . GDLLDEHCGAYAFGAPELFLWKSYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQ
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Template Sequence  QYQENPRKGHNGTIEFTSLDAHKGVAL. SRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA
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   201........210.........220....... ..230.........240.........250.........
 
   232.......240 .........250.........260.........270..
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Query Sequence  RQILAGVYP. . . . . . . . . . . APCGVSNELKDLLSLLMTVNPKYRPTVTEVMK
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Template Sequence  VQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK
Template Known Secondary structure  TTTS
TTS

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   260.........270.........280.........290.........300.........310.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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