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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank162Aligned Residues266
% Identity29%Templatec3hkoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase with a kinase PDBTitle: crystal structure of a cdpk kinase domain from cryptosporidium parvum,2 cgd7_40
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60. ........70........
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Query Sequence  GELYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLK. . . NKPCFQPAMKEANIMKK
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Template Sequence  LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQKDVERIKTEVRLMKK
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   4.....10.........20.........30.........40.........50.........60...
 
   7980.........90.........100.........110........
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Query Sequence  IKHPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGH. . . . . . . . . . . . . . . . . . . .
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Template Sequence  LHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPE
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TTB


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S
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S
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   67..70.........80.........90.........100.........110.........120......
 
   119120.........130.........140.........150.........160
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Query Sequence  . . . . . . . . . . . . . . . . . . IEEDEARQIFLQILSAVSYCHGLGIVHRDLKPDNIMIDDKGS
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Template Sequence  CNEEAINGSIFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKS
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   127..130.........140.........150.........160.........170.........180......
 
   161........170.........180.........190.........200.........210.........220
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Query Sequence  IKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKSYDGTKSDLWALGVILYYMVVGKV
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Template Sequence  FEIKLVDFGLSKEFYKLNNGAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAV
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TT
GGGTT




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   189190.........200.........210.........220.........230.........240........
 
   221........230.........240.. .......250.........260.........270......
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Query Sequence  PFDSYIIPELQRQILAGVYPAP. . . . CGVSNELKDLLSLLMTVNPKYRPTVTEVMKHPWL
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Template Sequence  PFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWI
Template Known Secondary structure  SS

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TTSGGGGGS
S
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   257..260.........270.........280.........290.........300.........310......
 
   277..280.......
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Query Sequence  RGHCKGLTNIH
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Template Conservation             
Template Sequence  SQFSDKIYKMS
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   317..320.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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