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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank280Aligned Residues254
% Identity25%Templatec2vagA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase clk1; PDBTitle: crystal structure of di-phosphorylated human clk1 in2 complex with a novel substituted indole inhibitor
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40....... ..50.........60.........70.........80..
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Query Sequence  LYSQYKVVRTLGHGTYAKVLLAKH. WLTGTPVAVKVLLKNKPCFQPAMKEANIMKKIKHP
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Template Sequence  LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTT
Template Known Secondary structure  TTTTTTTTTT
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   157..160.........170.........180.........190.........200.........210......
 
   83. .....90.........100.........110........ .120.........130.....
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Query Sequence  NI. . . . . . VSLLQVFETKTRGYLIMELVEGQELYEYIKSSGH. IEEDEARQIFLQILSAV
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Template Sequence  DPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSV
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TT
TT
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BTTT



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   217..220.........230.........240.........250.........260.........270......
 
   136...140.........150.........160.........170.........180...
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Query Sequence  SYCHGLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCG. . . . . . . . . . . .
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Template Sequence  NFLHSNKLTHTDLKPENILFVQSDYTEAYNKRDERTLINPDIKVVDFGSATYDDEHHSTL
Template Known Secondary structure  TT




GGGS





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   277..280.........290.........300.........310.........320.........330......
 
   184.....190.........200.........210.........220.........230....
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Query Sequence  AYAFGAPELFLWKSYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQI. . . . . . . . .
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Template Sequence  VRHYRAPEVILALGW. SQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPK
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   340.........350.... .....360.........370.........380.........390........
 
   235....240.........250.........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LAGVYPAPCGVSNELKDLLSLLMTV
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Template Sequence  HMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEY
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GGGTT


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   401........410.........420.........430.........440.........450.........460
 
   260.........270........
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Query Sequence  NPKYRPTVTEVMKHPWLRG
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Template Sequence  DPAKRITLREALKHPFFDL
Template Known Secondary structure  STTTS

TTSGGGGG
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   461........470.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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