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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank197Aligned Residues244
% Identity34%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60 .........70......... 80
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Query Sequence  SQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLL. . . . KNKPCFQPAMKEANIMKKI. K
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Template Sequence  DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN
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TTTTT

TTTTT
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   353......360.........370.........380.........390.........400.........410..
 
   81........90.........100.........110.........120.........130.........140
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Query Sequence  HPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSYCHG
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Template Sequence  HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD
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TTB


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   413......420.........430.........440.........450.........460.........470..
 
   141........150.........160.........170.........180.........190.........200
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Query Sequence  LGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKSYDG
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Template Sequence  KGIIYRDLKLDNVLLDHEGHCKLADFGMC. . . . . . . . KEGICGTPDYIAPEILQEMLY. G
Template Known Secondary structure  TT
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GGG
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TT
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GGG


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   473......480.........490.........500. ........510.........520.. .
 
   201........210.........220.........230.........240.........250.........260
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Query Sequence  TKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPAPCGVSNELKDLLSLLMTVN
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Template Sequence  PAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTKN
Template Known Secondary structure  TSS
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TTS
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   533......540.........550.........560.........570.........580.........590..
 
   261..... ...270........
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Query Sequence  PKYRPT. . . . . . VTEVMKHPWLRG
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Template Sequence  PTMRLGSLTQGGEHAILRHPFFKE
Template Known Secondary structure  GGGSTTSGGGT
TTSGGGTT
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   593......600.........610......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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