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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank318Aligned Residues210
% Identity14%Templatec4gygA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rio2 kinase; PDBTitle: crystal structure of the rio2 kinase from chaetomium thermophilum
Resolution2.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60 .........70....
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Query Sequence  YKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLL. . . . . . . . . . . . . KNKPCFQPAMKEAN
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Template Sequence  YSVGSRIGVGKESDIMIVAD. EKGKQKVLKIHRLGRISFRTVKRDYLRNRSTGSWMYLSR
Template Known Secondary structure  S
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   96...100.........110..... ....120.........130.........140.........150....
 
   75....80.........90........ .100.........110.........120........
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Query Sequence  IMKKIKHPNIVSLLQVFETKTRGY. . . . . . LIMELVEGQELYEYIKSSGHIEEDEARQIF
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Template Sequence  LAAIKEFAFMKALYEEGFPVPEPIAQSRHTIVMSLVDALPM. . . . . . RQVSSVPDPASLY
Template Known Secondary structure  TT
S


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   157..160.........170.........180.........190....... ..200.........210
 
   129130.........140.........150.........160 .........170........
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Query Sequence  LQILSAVSYCHGLGIVHRDLKPDNIMIDDKGS. . . . . . . . . . IKIIDFGLSTQVKPGDLL
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Template Sequence  ADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIDFPQM. . . . . . . . .
Template Known Secondary structure  TT
S


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   211........220.........230.........240.........250.........260.
 
   179180.........190.........200.........210.........220.........230........
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Query Sequence  DEHCGAYAFGAPELFLWKSYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGV
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Template Sequence  . . . VSMDHPNAEMYFDR. . . . . . . . DVQCIKRFFERRFHFVSTTPGPFYKDAKKTVGKDG
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   262.......270..... ....280.........290.........300.........310
 
   239240.. .......250.........260....
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Query Sequence  YPAP. . . . . . CGVSNELKDLLSLLMTVNPKYR
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Template Sequence  AKRLDAALEASGFTKKMAKDLEAAIREQQESR
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GGGTTGGGT

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   311........320.........330.........340..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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