Return to main results Retrieve Phyre Job Id

Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank311Aligned Residues229
% Identity23%Templatec3c1xA_
PDB info PDB header:transferaseChain: A: PDB Molecule:hepatocyte growth factor receptor; PDBTitle: crystal structure of the tyrosine kinase domain of the2 hepatocyte growth factor receptor c-met in complex with a3 pyrrolotriazine based inhibitor
Resolution2.17 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50... ......60. ........70.........80..
Predicted Secondary structure 







...

..




Query SS confidence 

























. . .







. .




















Query Sequence  YKVVRTLGHGTYAKVLLAKHWLTGTP. . . VAVKVLLK. . NKPCFQPAMKEANIMKKIKHP
Query Conservation 
 
   

 
 

 

 
    

  ...



 
  ..          
  

  
 

Alig confidence 

























...







..




















Template Conservation        

 
 

 

             



 
              
   
  
 

Template Sequence  VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP
Template Known Secondary structure 

SSSTTT

S
S
STTSTT


T
Template Predicted Secondary structure 















Template SS confidence 



























































   1078.1080.........1090.........1100.........1110.........1120.........1130.......
 
   83......90.........100.........110........ .120.........130.........140
Predicted Secondary structure 














..






Query SS confidence 



































. .





















Query Sequence  NIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGH. . IEEDEARQIFLQILSAVSYCHG
Query Conservation 


 
          





  

 
   
     ..
       
  

  

 


 
Alig confidence 



































..





















Template Conservation 


                                               
         
Template Sequence  NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS
Template Known Secondary structure  TB






SS



TT
B
TT


B
Template Predicted Secondary structure 












































Template SS confidence 



























































   1138.1140.........1150.........1160.........1170.........1180.........1190.......
 
   141........150.........160.........170.........180.........190.........200
Predicted Secondary structure 






































Query SS confidence 



























































Query Sequence  LGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKSYDG
Query Conservation    







 



     


 




             

  
 


 
       
Alig confidence 

























................















.
Template Conservation                          
 ................                . 
Template Sequence  KKFVHRDLAARNCMLDEKFTVKVADF. . . . . . . . . . . . . . . . LPVKWMALESLQTQKF. T
Template Known Secondary structure  TT


S


GGG
TT




................

GGGS



.
Template Predicted Secondary structure 




















................













.
Template SS confidence 



























































   1198.1200.........1210.........1220... ......1230......... 1240
 
   201........210....... ..220.........230....... ..240.........250........
Predicted Secondary structure  .










.










Query SS confidence 
















.



















.




















Query Sequence  TKSDLWALGVILYYMVV. GKVPFDSYIIPELQRQILAG. VYPAPCGVSNELKDLLSLLMT
Query Conservation   
 








 



.
  

           
   .    
   
     

   
 
Alig confidence 
















.



















.




















Template Conservation     
  
 

   

 
   
             
               
  

  

 
Template Sequence  TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH
Template Known Secondary structure  TTS

S
TTS
SS
TT





TT

T
Template Predicted Secondary structure 





























Template SS confidence 



























































   1262.......1270.........1280.........1290.........1300.........1310.........1320.
 
   259260.........270...
Predicted Secondary structure 






Query SS confidence 














Query Sequence  VNPKYRPTVTEVMKH
Query Conservation   

  
 
  


 
Alig confidence 














Template Conservation   

  


  


  
Template Sequence  PKAEMRPSFSELVSR
Template Known Secondary structure  SSGGGS

Template Predicted Secondary structure 




Template SS confidence 














   1322.......1330......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D