Return to main results Retrieve Phyre Job Id

Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank64Aligned Residues266
% Identity30%Templatec2r7bA_
PDB info PDB header:signaling protein, transferaseChain: A: PDB Molecule:phosphoinositide-dependent protein kinase 1; PDBTitle: crystal structure of the phosphoinositide-dependent kinase-2 1 (pdk-1)catalytic domain bound to a dibenzonaphthyridine3 inhibitor
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   22.......30.........40.........50.........60 .........70.......
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Query Sequence  GELYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLL. . . . KNKPCFQPAMKEANIMK
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Template Sequence  KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS
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TT
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   76...80.........90.........100.........110.........120.........130.....
 
   78.80.........90.........100.........110.........120.........130.......
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Query Sequence  KIKHPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSY
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Template Sequence  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY
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   136...140.........150.........160.........170.........180.........190.....
 
   138.140.........150.........160.........170.........180.........190.......
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Query Sequence  CHGLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKS
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Template Sequence  LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL. . . . . . . . FVGTAQYVSPELLTEKS
Template Known Secondary structure  TT




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   196...200.........210.........220.........230 .........240.......
 
   198.200.........210.........220.........230.........240.........250.......
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Query Sequence  YDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPAPCGVSNELKDLLSLLM
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Template Sequence  A. CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL
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   259 260.........270.........280.........290.........300.........310.......
 
   258.260.........270.........280.........290.......
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Query Sequence  TVNPKYRPTVTEVMKHPWLRGHCKGLTNIHEEPVPVRPDP
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Template Sequence  VLDATKRLGCEEMEGYGPLKAH. PFFESVTWENLHQQTPP
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SSTTSSTTSGGGTTS.GGGTT

GGGGGGS


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   318.320.........330......... 340.........350......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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