Return to main results Retrieve Phyre Job Id

Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank89Aligned Residues260
% Identity25%Templatec4dn5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase kinase kinase 14; PDBTitle: crystal structure of nf-kb-inducing kinase (nik)
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60
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Query Sequence  MPAHIEEELPPPSPQPSNPEDGELYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLL
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Template Sequence  KTEDNEGVLLTEKLKPVDYEYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVR
Template Known Secondary structure  S



STTS

BTTB

BTTT
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   373......380.........390.........400.........410.........420.........430..
 
   61........70.........80.........90.........100.........110.........120
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Query Sequence  KNKPCFQPAMKEANIMKKIKHPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGHIE
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Template Sequence  LEVFRA. . . . EELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLP
Template Known Secondary structure  TTT

T....TTSS


TTB

TT


TT
BSS

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   433..... .440.........450.........460.........470.........480........
 
   121........130.........140.........150.........160 .........170.........
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Query Sequence  EDEARQIFLQILSAVSYCHGLGIVHRDLKPDNIMIDDKGS. IKIIDFGLSTQVKPGDLLD
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Template Sequence  EDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQIP. . . .
Template Known Secondary structure  TT
S

SGGG
TTS




TT




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   489490.........500.........510.........520.........530.........540....
 
   180.........190.........200.........210.........220.........230.......
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Query Sequence  EHCGAYAFGAPELFLWKSYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAG. .
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Template Sequence  . . . GTETHMAPEVVLGRSC. DAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPP
Template Known Secondary structure  ...S
GGG

TT


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TTTTT

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   558.560.........570... ......580.........590.........600.........610...
 
   238.240.........250.........260.........270..
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Query Sequence  . VYPAPCGVSNELKDLLSLLMTVNPKYRPTVTEVMK
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Template Sequence  PVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAELGG
Template Known Secondary structure  GGGGS
TTS
S
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   614.....620.........630.........640.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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