Return to main results Retrieve Phyre Job Id

Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank317Aligned Residues220
% Identity26%Templatec2oidA_
PDB info PDB header:transferaseChain: A: PDB Molecule:interleukin-1 receptor-associated kinase 4; PDBTitle: crystal structure of irak4 kinase domain complexed with2 amppnp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60.........70.........80.....
Predicted Secondary structure 



















Query SS confidence 



























































Query Sequence  SQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKNKPCFQPAMKEANIMKKIKHPNIV
Query Conservation    
 
   

 
 

 

 
    

  



 
            
  

  
 




Alig confidence 





















..







.............














Template Conservation          

 
 

 


   .. 
  



.............


 

  
 
 


Template Sequence  RPISVGGNKGEGGFGVVYKGYV. . NNTTVAVK. . . . . . . . . . . . . KEIKVMAKCQHENLV
Template Known Secondary structure  S
GGGTS


TT
..TT.............




TTB
Template Predicted Secondary structure 


..

.............






Template SS confidence 



























































   183......190.........200.... .....210.. .......220.......
 
   86...90.........100.........110........ .120.........130.........140..
Predicted Secondary structure 











...







Query SS confidence 
































. . .























Query Sequence  SLLQVFETKTRGYLIMELVEGQELYEYIKSSGH. . . IEEDEARQIFLQILSAVSYCHGLG
Query Conservation   
          





  

 
   
     ...
       
  

  

 


   
Alig confidence 





......




















...























Template Conservation        ......    
                   
                       
Template Sequence  ELLGFS. . . . . . CLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH
Template Known Secondary structure 

......


TT
BTTGGG




TT
Template Predicted Secondary structure 





......



























Template SS confidence 



























































   247..250.. .......260.........270.........280.........290.........300
 
   143......150.........160.........170.........180.........190.........200..
Predicted Secondary structure 





































Query SS confidence 



























































Query Sequence  IVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKSYDGTK
Query Conservation 







 



     


 




             

  
 


 
        
Alig confidence 


























....























..


Template Conservation                             ....                        ..   
Template Sequence  HIHRDIKSANILLDEAFTAKISDFGLA. . . . RASEVMRIVGTTAYMAPEALRGEI. . TPK
Template Known Secondary structure 
S

SGGG
TT




SS
....






S
GGG

TTTTTT

..
Template Predicted Secondary structure 



















....




















..


Template SS confidence 



























































   307..310.........320.........330... ......340.........350....... ..360
 
   203......210.........220.........230..... ....240.......
Predicted Secondary structure 








...............










Query SS confidence 
































. . . . . . . . . . . . . . .











Query Sequence  SDLWALGVILYYMVVGKVPFDSYIIPELQRQIL. . . . . . . . . . . . . . . AGVYPAPCGVSN
Query Conservation   








 




  

           
 ...............      
   
 
Alig confidence 
































...............











Template Conservation   
  
 
    
   
  
                                         
Template Sequence  SDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVE
Template Known Secondary structure 


SB
TTSSSSBGGGTTSS
S
SS
S


Template Predicted Secondary structure 



























Template SS confidence 



























































   368.370.........380.........390.........400.........410.........420.......
 
   248.250.........260.........270..
Predicted Secondary structure 







Query SS confidence 
























Query Sequence  ELKDLLSLLMTVNPKYRPTVTEVMK
Query Conservation      

   
  

  
 
  


 
Alig confidence 
























Template Conservation      

  

  

  


  

  
Template Sequence  AMYSVASQCLHEKKNKRPDIKKVQQ
Template Known Secondary structure  T
SSTTTS

Template Predicted Secondary structure 






Template SS confidence 
























   428.430.........440.........450..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D