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Job DescriptionA0AUV4
Confidence97.80%DateTue Jul 30 13:10:30 BST 2013
Rank350Aligned Residues124
% Identity15%Templatec3csvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:aminoglycoside phosphotransferase; PDBTitle: crystal structure of a putative aminoglycoside phosphotransferase2 (yp_614837.1) from silicibacter sp. tm1040 at 2.15 a resolution
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60.........70......... 80.........90.........100
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Query Sequence  LLAKHWLTGTPVAVKVLLKNKPCFQPAMKEANIMKKI. . KHPNIVSLLQVFETKTRGYLI
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Template Sequence  YQRLRSPTGAKAVLXDWS. . PEEGGDTQPFVDLAQYLRNLDISAPEIYAEEHARG. . LLL
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TT



..TTTT

STT
B


TTTT..
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   34.....40.........50. ........60.........70.........80...... ...
 
   101........110.......
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Query Sequence  MELVEGQELYEYIKSSG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  IEDLGDALFTEVINNDPAQEXPLYRAAVDLLIHLHDAQTPELARLDPETLSEXTRLAFSE
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S
B
GGGTS





B

TTTT
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   90.........100.........110.........120.........130.........140.........
 
   118.120.........130.........140. ........150.........160 ....
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Query Sequence  . . . . . . . HIEEDEARQIFLQILSAVSYCHGL. . GIVHRDLKPDNIMIDDKGS. . . . IKII
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Template Sequence  YRYAILGDAAEDNRKRFEHRFAQILSAQLEGDXVFVHRDFHAQNLLWLPEREGLARVGVI
Template Known Secondary structure  SS



S


S

SGGG
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GGGG
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   150.........160.........170.........180.........190.........200.........
 
   165....170
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Query Sequence  DFGLST
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Template Sequence  DFQDAK
Template Known Secondary structure 

TT
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   210.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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