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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank256Aligned Residues254
% Identity26%Templatec4fi1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:casein kinase ii subunit alpha; PDBTitle: crystal structure of scck2 alpha in complex with atp
Resolution2.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........
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Query Sequence  YSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKNKPCFQPAMKEANIMKKI. . . . .
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Template Sequence  TKDYEIENKVGRGKYSEVFQGVKLDSKVKIVIKMLKPVKK. . KKIKREIKILTDLSNEKV
Template Known Secondary structure  STTTTTTTT
S

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   37..40.........50.........60.........70...... ...80.........90....
 
   80.........90.... .....100...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KHPNIVSLLQVFETK. . TRGYLIMEL
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Template Sequence  PPTTLPFQKDQYYTNQKEDVLKFIRPYIFDQPHNGHANIIHLFDIIKDPISKTPALVFEY
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GGGGB


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   95....100.........110.........120.........130.........140.........150....
 
   104.....110.........120.........130.........140.........150...... ...160..
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Query Sequence  VEGQELYEYIKSSGHIEEDEARQIFLQILSAVSYCHGLGIVHRDLKPDNIMID. DKGSIK
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Template Sequence  VDNVDFRILYPK. . . LTDLEIRFYMFELLKALDYCHSMGIMHRDVKPHNVMIDHKNKKLR
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GGG...

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SGGGGGGT
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   155....160...... ...170.........180.........190.........200.........210.
 
   163......170.........180.........190.........200.........210.........220..
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Query Sequence  IIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKSYDGTKSDLWALGVILYYMVVGKVPF
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Template Sequence  LIDWGLAEFYHVNMEYNVRVASRFFKGPELLVDYRMYDYSLDLWSFGTMLASMIFKREPF
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TT


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S

S
GGG

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   212.......220.........230.........240.........250.........260.........270.
 
   223......230...... ...240....
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Query Sequence  . DSYIIPELQRQILA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GVYPAPCG
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Template Conservation              
                                               
Template Sequence  FHGTSNTDQLVKIVKVLGTSDFEKYLLKYEITLPREFYDMDQYIRKPWHRFINDGNKHLS
Template Known Secondary structure  S

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GGGGG







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   272.......280.........290.........300.........310.........320.........330.
 
   245....250.........260.........270.........280...
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Query Sequence  VSNELKDLLSLLMTVNPKYRPTVTEVMKHPWLRGHCKGL
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Template Sequence  GNDEIIDLIDNLLRYDHQERLTAKEAMGHPWFAPIREQI
Template Known Secondary structure 
SS
SSGGGS

TSGGGTT
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   332.......340.........350.........360.........370
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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