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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank309Aligned Residues223
% Identity33%Templatec3rnyA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal protein s6 kinase alpha-1; PDBTitle: crystal structure of human rsk1 c-terminal kinase domain
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70......... 80.........90.........
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Query Sequence  KVLLAKHWLTGTPVAVKVLLKNKPCFQPAMKEANIMKKI. KHPNIVSLLQVFETKTRGYL
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Template Sequence  KETICKRCVHNMEYAVKVIDK. . . . . . . PSEEIEILLRYGQHPNIITLKDVY. . . . . . DL
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   421........430.........440. ........450.........460..... ..
 
   100.........110.........120.........130.........140.........150.........
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Query Sequence  IMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSYCHGLGIVHRDLKPDNIMIDDKG
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Template Sequence  VTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDES
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S
BTSSS


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GGGSSTT
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   488.490.........500.........510.........520.........530.........540.......
 
   160.........170.........180.........190.........200.........210.........
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Query Sequence  SIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKSYDGTKSDLWALGVILYYMVVGK
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Template Sequence  GNPECLRICDFG. FAKQLRAENGLLMTPCYTEVLKRQGY. DEGCDIWSLGILLYTMLAGY
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GGG


T.T

B
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B

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   548.550......... 560.........570.........580..... ....590.........600.....
 
   220.. .......230.........240.. .......250.........260.........270..
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Query Sequence  VPF. . . DSYIIPELQRQILAGVYPAP. . . . CGVSNELKDLLSLLMTVNPKYRPTVTEVMK
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Template Sequence  TPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQ
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SS
SSTT

T




SGGGGGS
S
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   612.......620.........630.........640.........650.........660.........670.
 
   273.....
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Query Sequence  HPWLRG
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Template Sequence  HPWVTQ
Template Known Secondary structure  S
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   672.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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