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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank310Aligned Residues242
% Identity20%Templatec3kmuA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:integrin-linked kinase; PDBTitle: crystal structure of the ilk/alpha-parvin core complex (apo)
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60 .........70.........80.
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Query Sequence  YSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLL. . . KNKPCFQPAMKEANIMKKIKH
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Template Sequence  FKQLNFLTKLNENHSGELWKGRWQ. . GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH
Template Known Secondary structure  GGG
TTT..T

TT

GGGG


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   190.........200.........210... ......220.........230.........240.......
 
   82.......90...... ...100.........110........ .120.........130.......
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Query Sequence  PNIVSLLQVFETKTR. . GYLIMELVEGQELYEYIKSSGH. . IEEDEARQIFLQILSAVSY
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Template Sequence  PNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAF
Template Known Secondary structure  TT

TTTSSS


TT
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   248.250.........260.........270.........280.........290.........300.......
 
   138.140.. .......150.........160.........170.........180.........190.....
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Query Sequence  CHGLG. . IVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLW
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Template Sequence  LHTLEPLIPRHALNSRSVXIDEDXTARISXADVK. . . . FSFQSPGRXYAPAWVAPEALQK
Template Known Secondary structure  TTSSS

TT


SGGG
TTS
GGGS
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TT

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   308.310.........320.........330.........340. ........350.........360...
 
   196.. .200.........210.........220.........230....... ..240.........250.
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Query Sequence  KSY. . DGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAG. . VYPAPCGVSNELKD
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Template Sequence  KPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIPPGISPHVSK
Template Known Secondary structure 
GGGS

S
TTTTS
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TT

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   364.....370.........380.........390.........400.........410.........420...
 
   252.......260.........270..
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Query Sequence  LLSLLMTVNPKYRPTVTEVMK
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Template Sequence  LXKICXNEDPAKRPKFDXIVP
Template Known Secondary structure  T
SSGGGS

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   424.....430.........440....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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