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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank157Aligned Residues250
% Identity23%Templatec3l9pA_
PDB info PDB header:transferaseChain: A: PDB Molecule:anaplastic lymphoma kinase; PDBTitle: crystal structure of the anaplastic lymphoma kinase catalytic domain
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60 .........70.........80...
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Query Sequence  SQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLL. . KNKPCFQPAMKEANIMKKIKHPN
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Template Sequence  KNITLIRGLGHGAFGEVYEGQVSGSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN
Template Known Secondary structure  GG



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   1114.....1120.........1130.........1140.........1150.........1160.........1170...
 
   84.....90.........100.........110..... ....120.........130......
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Query Sequence  IVSLLQVFETKTRGYLIMELVEGQELYEYIKS. . . . . . . SGHIEEDEARQIFLQILSAVS
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Template Sequence  IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ
Template Known Secondary structure  B


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   11791180.........1190.........1200.........1210.........1220.........1230........
 
   137..140.........150......... 160.........170. ........180.........190
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Query Sequence  YCHGLGIVHRDLKPDNIMIDDKG. . . SIKIIDFGLSTQ. . . VKPGDLLDEHCGAYAFGAP
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Template Sequence  YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP
Template Known Secondary structure  TT


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   12391240.........1250.........1260.........1270.........1280.........1290........
 
   191........200.........210....... ..220.........230....... ..240........
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Query Sequence  ELFLWKSYDGTKSDLWALGVILYYMVV. GKVPFDSYIIPELQRQILAG. VYPAPCGVSNE
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Template Sequence  EAFMEGIF. TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGP
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   12991300...... ...1310.........1320.........1330.........1340.........1350.......
 
   249250.........260.........270......
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Query Sequence  LKDLLSLLMTVNPKYRPTVTEVMKHPWL
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Template Sequence  VYRIMTQCWQHQPEDRPNFAIILERIEY
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   1358.1360.........1370.........1380.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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