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Job DescriptionA0AUV4
Confidence98.95%DateTue Jul 30 13:10:30 BST 2013
Rank327Aligned Residues133
% Identity20%Templatec3ovcA_
PDB info PDB header:transferase/antibioticChain: A: PDB Molecule:hygromycin-b 4-o-kinase; PDBTitle: crystal structure of aminoglycoside phosphotransferase aph(4)-ia
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80... .....
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Query Sequence  VRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKNKPCFQPAMKEANIMKKIKHPN. . IVSLL
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Template Sequence  LXQLSEGEESRAFSFDVG. . GRGYVLRVNSCADG. . . . FYKDRYVYRHFASAALPIPEVL
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   25....30.........40.. .......50...... ...60.........70........
 
   8990...... ...100.........110.......
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Query Sequence  QVFETKTR. GYLIMELVEGQELYEYIKSSG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  DIGEFSESLTYCISRRAQGVTLQDLPETELPAVLQPVAEAXDAIAAADLSQTSGFGPFGP
Template Known Secondary structure  SSSS



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GGGSGGG


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   7980.........90.........100.........110.........120.........130........
 
   118.120.........130........ .140.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HIEEDEARQIFLQILSAVSYC. HGLGIVHRD
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Template Sequence  QGIGQYTTWRDFICAIADPHVYHWQTVXDDTVSASVAQALDELXLWAEDCPEVRHLVHAD
Template Known Secondary structure  TSBSSGGG
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   139140.........150.........160.........170.........180.........190........
 
   148.150.........160.........
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Query Sequence  LKPDNIMIDDKGSIKIIDFGLS
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Template Sequence  FGSNNVLTDNGRITAVIDWSEA
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   199200.........210.........220
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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