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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank115Aligned Residues249
% Identity28%Templatec3kvwA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity tyrosine-phosphorylation-regulated kinase PDBTitle: crystal structure of dual-specificity tyrosine phosphorylation2 regulated kinase 2 (dyrk2) in complex with an indirubin ligand
Resolution2.28 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70.........80.
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Query Sequence  LYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKNKPCFQPAMKEANIMKKIKH. .
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Template Sequence  VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD
Template Known Secondary structure  TTTSSSTTTT
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   145....150.........160.........170.........180.........190.........200....
 
   82.......90.........100.........110...... ...120.........130.....
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Query Sequence  . . . . PNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSS. . GHIEEDEARQIFLQILSAV
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Template Sequence  KDNTMNVIHMLENFTFRNHICMTFELL. SMNLYELIKKNKFQGFSLPLVRKFAHSILQCL
Template Known Secondary structure  TTS
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B

TT


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BTTT



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   205....210.........220.........230. ........240.........250.........260...
 
   136...140.........150......... 160.........170.........180.........190...
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Query Sequence  SYCHGLGIVHRDLKPDNIMIDDKG. . SIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELF
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Template Sequence  DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH. . . QRVYTIQSRFYRAPEVI
Template Known Secondary structure  T
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SGGGSSTTS




TT
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GGG

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   264.....270.........280.........290.........300... ......310.........320
 
   194.....200.........210.........220.........230.........240..
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Query Sequence  LWKSYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPAP. . . . . . . . . . .
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Template Sequence  LGARY. GMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAK
Template Known Secondary structure  TB

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TSS
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   322.... ...330.........340.........350.........360.........370.........380
 
   243......250.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . CGVSNELKDLLSLLM
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Template Sequence  NFVSKGYPRYCTVTTLSDVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCL
Template Known Secondary structure  B



BTTS








TT


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   381........390.........400.........410.........420.........430.........440
 
   258.260.........270.......
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Query Sequence  TVNPKYRPTVTEVMKHPWLR
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Template Sequence  EWDPAVRMTPGQALRHPWLR
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SSTTTS

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   444.....450.........460...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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