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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank308Aligned Residues241
% Identity22%Templatec3s95A_
PDB info PDB header:transferase/antibioticChain: A: PDB Molecule:lim domain kinase 1; PDBTitle: crystal structure of the human limk1 kinase domain in complex with2 staurosporine
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60 .........70.........80....
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Query Sequence  SQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLL. KNKPCFQPAMKEANIMKKIKHPNI
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Template Sequence  SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNV
Template Known Secondary structure  GG

SSTTT

S


TT


TTB
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   337..340.........350.........360.........370.........380.........390......
 
   85....90.........100.........110........ .120.........130.........140...
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Query Sequence  VSLLQVFETKTRGYLIMELVEGQELYEYIKSSGH. IEEDEARQIFLQILSAVSYCHGLGI
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Template Conservation                 
 
                                          
Template Sequence  LKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNI
Template Known Secondary structure 

TT

TT
B

TTS
TT
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   397..400.........410.........420.........430.........440.........450......
 
   144.....150.........160.........170.........180.........190.........200...
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Query Sequence  VHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKSYDGTKS
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Template Sequence  IHRDLNSHNCLVRENKNVVVADFG. . . . . LARLMVYTVVGNPYWMAPEMINGRSY. DEKV
Template Known Secondary structure 
S

STTS
TTS



T.....T






S
GGG

TT


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T
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   457..460.........470.........480 .........490.........500...... ...510
 
   204.....210.........220.........230....... ..240.........250.........260
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Query Sequence  DLWALGVILYYMVVGKVPFDSYIIPELQRQILAG. . . VYPAPCGVSNELKDLLSLLMTVN
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Template Sequence  DVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLD
Template Known Secondary structure  T

SSTTTS
B
TTSSB
T

TT

TTT
SS
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   531........540.........550.........560.........570.........580.........590
 
   261........270..
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Query Sequence  PKYRPTVTEVMK
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Template Sequence  PEKRPSFVKLEH
Template Known Secondary structure  GGGS

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   591........600..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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