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Job DescriptionA0AUV4
Confidence97.86%DateTue Jul 30 13:10:30 BST 2013
Rank348Aligned Residues129
% Identity26%Templatec3c5iD_
PDB info PDB header:transferaseChain: D: PDB Molecule:choline kinase; PDBTitle: crystal structure of plasmodium knowlesi choline kinase, pkh_134520
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40...... ...50.........60.........70.......
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Query Sequence  SQYKVVRTLGHGTYAKVLLAK. . . . . . . . HWLTGTPVAVKVLLKNKPCFQPAMKEANIMK
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Template Sequence  DNLRVKQI. . . LLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYK
Template Known Secondary structure  GG...


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   34.....40. ........50.........60.........70.........80.........90
 
   78. 80.........90.........100.........110.........120.........130......
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Query Sequence  KI. KHPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVS
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Template Sequence  TMSKYKIAPQLLNTFNG. . . . GRIEEWLYGDPL. . . . . . . . RIDDLKNPTILIGIANVLG
Template Known Secondary structure  TTSS

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GGGGG
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   93......100......... 110.........120. ........130.........140
 
   137..
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Query Sequence  YCH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  KFHTLSRKRHLPEHWDRTPCIFKMMEKWKNQLFKYKNIEKYNCDIHKYIKESDKFIKFMK
Template Known Secondary structure  TS


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TTSTTGGGT
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   141........150.........160.........170.........180.........190.........200
 
   140.........150.........160.........170
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Query Sequence  . . . . . . . . . . GLGIVHRDLKPDNIMIDDKGSIKIIDFGLST
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Template Sequence  VYSKSDNLANTIVFCHNDLQENNIINTNKC. LRLIDFEYSG
Template Known Secondary structure  TTS

GGG

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SGGG
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   201........210.........220.........230 .........240
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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