Return to main results Retrieve Phyre Job Id

Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank153Aligned Residues243
% Identity31%Templatec2z7qA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal protein s6 kinase alpha-1; PDBTitle: crystal structure of the n-terminal kinase domain of human rsk-1 bound2 to amp-pcp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40........ .50.........60.........70.........80..
Predicted Secondary structure 





...










Query SS confidence 






















. . .

































Query Sequence  SQYKVVRTLGHGTYAKVLLAKHW. . . LTGTPVAVKVLLKNKPCFQPAMKEANIMKKIKHP
Query Conservation    
 
   

 
 

 

 
   ... 

  



 
            
  

  
 

Alig confidence 






















...










...............







Template Conservation    
 
   

 
 

 

 
            
 

 ............... 
  
 

Template Sequence  SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVL. . . . . . . . . . . . . . . ILADVNHP
Template Known Secondary structure  GGTT
SSSSTT

...............






T
Template Predicted Secondary structure 








...............



Template SS confidence 



























































   60.........70.........80.........90...... ...100....
 
   83......90.........100.........110.........120.........130.........140..
Predicted Secondary structure 






















Query SS confidence 



























































Query Sequence  NIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSYCHGLG
Query Conservation 


 
          





  

 
   
     
       
  

  

 


   
Alig confidence 



























































Template Conservation 


             

 
      
                     
   
       
Template Sequence  FVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLG
Template Known Secondary structure  TB

TT


TT
BSS

TT
Template Predicted Secondary structure 
























Template SS confidence 



























































   123......130.........140.........150.........160.........170.........180..
 
   143......150.........160.........170.........180.........190.........200..
Predicted Secondary structure 





































Query SS confidence 



























































Query Sequence  IVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKSYDGTK
Query Conservation 







 



     


 




             

  
 


 
        
Alig confidence 




























...........















.


Template Conservation 
                            ...........        
       .   
Template Sequence  IIYRDLKPENILLDEEGHIKLTDFGLSKE. . . . . . . . . . . GTVEYMAPEVVNRQGH. SHS
Template Known Secondary structure 


TT
SGGG
SSS

S


S

...........

GGG

TTS

.
Template Predicted Secondary structure 




























...........















.


Template SS confidence 



























































   183......190.........200.........210. ........220....... ..230
 
   203......210.........220.........230.........240.........250.........260..
Predicted Secondary structure 























Query SS confidence 



























































Query Sequence  SDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPAPCGVSNELKDLLSLLMTVNPK
Query Conservation   








 




  

           
       
   
     

   
  

 
Alig confidence 



























































Template Conservation   





  



  
  

           
       
   
     

   
  

 
Template Sequence  ADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALFKRNPA
Template Known Secondary structure  SS
SS

SST




TTS


SSTT
Template Predicted Secondary structure 


























Template SS confidence 



























































   243......250.........260.........270.........280.........290.........300..
 
   263. .....270.........280.........290.....
Predicted Secondary structure 
.....























Query SS confidence 

. . . . .






























Query Sequence  YR. . . . . PTVTEVMKHPWLRGHCKGLTNIHEEPVPVRP
Query Conservation   
..... 
  


 

                     
Alig confidence 

.....






























Template Conservation   
          

 

 
       
       
  
Template Sequence  NRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIKPPFKP
Template Known Secondary structure  TSTTSSSSTTSGGGTT

TT
S

SS

Template Predicted Secondary structure 




















Template SS confidence 





































   303......310.........320.........330.........340
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D