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Job DescriptionA0AUV4
Confidence98.80%DateTue Jul 30 13:10:30 BST 2013
Rank331Aligned Residues131
% Identity22%Templatec3tdvB_
PDB info PDB header:transferaseChain: B: PDB Molecule:gentamicin resistance protein; PDBTitle: structure of the gdp complex of wild-type aminoglycoside 2'-2 phosphotransferase-iiia
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.. .....
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Query Sequence  VRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKNKPCFQPAMKEANIMKKIKHP. . . NIVSL
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Template Sequence  VESLGEGFRNYAILV. . . . . NGDWVFR. FPKSQQGADELNKEIQLLPLLVGCVKVNIPQY
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   24.....30........ .40..... ....50.........60.........70.......
 
   88.90... ......100.........110.........120.........130.........140
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Query Sequence  LQVFET. KTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSYCHG. . . . . .
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Template Sequence  VYIGKRSDGNPFVGYRKVQGQILGEDGMA. . VFPDDAKDRLALQLAEFMNELSAFPVETA
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   78.80.........90.........100...... ...110.........120.........130.....
 
   141.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LGIVHR
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Template Sequence  ISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHG
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B

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   136...140.........150.........160.........170.........180.........190.....
 
   147..150.........160 .........
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Query Sequence  DLKPDNIMIDDKGS. . . . IKIIDFGLS
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Template Sequence  DLSPDHFLTNLNSRQTPLTGIIDFGDA
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   196...200.........210.........220..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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