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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank182Aligned Residues270
% Identity42%Templatec2hakH_
PDB info PDB header:signaling protein,transferaseChain: H: PDB Molecule:serine/threonine-protein kinase mark1; PDBTitle: catalytic and ubiqutin-associated domains of mark1/par-1
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60 .........70.........80.
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Query Sequence  YSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLL. . . KNKPCFQPAMKEANIMKKIKH
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Template Sequence  IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNH
Template Known Secondary structure  TT
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TTT


TT




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   50.........60.........70.........80.........90.........100.........
 
   82.......90.........100.........110.........120.........130.........140.
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Query Sequence  PNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSYCHGL
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Template Sequence  PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK
Template Known Secondary structure  TTB


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TT
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   110.........120.........130.........140.........150.........160.........
 
   142.......150.........160.........170.........180.........190.........200.
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Query Sequence  GIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKSYDGT
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Template Sequence  YIVHRDLKAENLLLDGDMNIKIADFGFSNEF. . . . . . . . . . . . . . . . . . . . . . . . . TVGP
Template Known Secondary structure  S


S


GGG
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TT

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   170.........180.........190.........200 ....
 
   202.......210.........220.........230.........240.........250.........260.
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Query Sequence  KSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPAPCGVSNELKDLLSLLMTVNP
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Template Sequence  EVDVWSLGVILYTLVSGSLPF. . . . . . . . . . . . . . . . DRIPFYMSTDCENLLKKLLVLNP
Template Known Secondary structure  SSS
S
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SS

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   230.........240.........250 .........260.........270...
 
   262.......270........ .280.........290.........300.........310.........320
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Query Sequence  KYRPTVTEVMKHPWLRG. HCKGLTNIHEEPVPVRPDPDIVDAMQYIGFQAKDIRESLTKE
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Template Sequence  IKRGSLEQIMKDRWMNVGHEEEELKPYTEPDPDFNDTKRIDIMVTMGFARDEINDALINQ
Template Known Secondary structure  GGS


STTSTT

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TT
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TT
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   290.........300.........310.........320.........330.........340.........
 
   321........330.....
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Query Sequence  KFNEMSAAYYLLEEQ
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Template Conservation            

   
Template Sequence  KYDEVMATYILLGRK
Template Known Secondary structure 

ST

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   350.........360....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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