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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank269Aligned Residues253
% Identity25%Templatec3begA_
PDB info PDB header:transferase/splicingChain: A: PDB Molecule:serine/threonine-protein kinase srpk1; PDBTitle: crystal structure of sr protein kinase 1 complexed to its substrate2 asf/sf2
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70.........80.
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Query Sequence  LYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKNKPCFQPAMKEANIMKKIKH. .
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Template Sequence  FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSD
Template Known Secondary structure  TTT
SSSSSSS
S
SS
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   76...80.........90.........100.........110.........120.........130.....
 
   82.......90.........100......... 110.........120.........130
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Query Sequence  . . . . . . PNIVSLLQVFETKTRGYLIMELVEGQEL. . . . . YEYIKSSGHIEEDEARQIFLQ
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Template Sequence  PNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQ
Template Known Secondary structure  TT
TTSTTB



B
SS
B






BTTTS


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   136...140.........150.........160.........170.........180.........190.....
 
   131.... ....140.........150........ .160..
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Query Sequence  ILSAV. SYCHGLGIVHRDLKPDNIMIDDK. . . . . . . . . . . . . . . . . . . . . . . . . . . GSIK
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Template Sequence  VLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEAAGNFLVNPLEPKNAEKLKVK
Template Known Secondary structure  S




SGGG


TT




S

SS
GGGTTT

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   196...200.........210.........220.........230.........240.........250.....
 
   163......170.........180.........190.........200.........210.........220..
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Query Sequence  IIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKSYDGTKSDLWALGVILYYMVVGKVPF
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Template Sequence  IADLGNACWVH. . KHFTEDIQTRQYRSLEVLIGSGY. NTPADIWSTACMAFELATGDYLF
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TT
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S
S

S
GGG

T


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S
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   495....500..... ....510.........520........ .530.........540.........550.
 
   223......230.. ..
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Query Sequence  DSYIIPELQR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QI
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Template Sequence  EPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEV
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SSS

S

TT
TTB
SSSSBSS

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   552.......560.........570.........580.........590.........600.........610.
 
   235....240.........250.........260.........270.........
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Query Sequence  LAGVYPAPCGVSNELKDLLSLLMTVNPKYRPTVTEVMKHPWLRGH
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Template Sequence  LVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNSA
Template Known Secondary structure  TT


TTTT
SSTTTS

S
GGGG

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   612.......620.........630.........640.........650......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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