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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank284Aligned Residues246
% Identity21%Templatec3gc0A_
PDB info PDB header:transferaseChain: A: PDB Molecule:kinase, cmgc cdk; PDBTitle: structure of the cmgc cdk kinase from giardia lamblia in complex with2 amp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80....
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Query Sequence  YSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKNKPCFQPAMKEANIMKKIKHPNI
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Template Sequence  IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEH. . . . TAIREVSLLKELQHRNI
Template Known Secondary structure  GGG
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GGG

BTTB
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   12.......20.........30.........40.........50 .........60.......
 
   85....90.........100.........110.........120.........130.........140....
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Query Sequence  VSLLQVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAVSYCHGLGIV
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Template Sequence  IELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLH
Template Known Secondary structure 

TT

S
TT

TT


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   75....80.........90.........100.........110.........120.........130....
 
   145....150.........160.........170.........180.........190.........200....
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Query Sequence  HRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWKSYDGTKSD
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Template Sequence  RDLKPQNLLLSVETPVLKIGDFGLARAFEI. . . . . . . . ITLWYRPPEILLGSRHYSTSVD
Template Known Secondary structure  S


GGG





TT

G........GGGGG

TT
S


T
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   135....140.........150.........160.... .....170.........180......
 
   205....210.........220.........230.........240.
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Query Sequence  LWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPA. . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  IWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRG
Template Known Secondary structure  SS
SS

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TTTSTTGGGSTT

TTS




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   200.........210.........220.........230.........240.........250.........
 
   242.......250.........260.........270.........280..
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Query Sequence  . . . . . . . PCGVSNELKDLLSLLMTVNPKYRPTVTEVMKHPWLRGHCKG
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Template Sequence  KTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDFD
Template Known Secondary structure 

GGGS
T
SSGGGS

SGGGSS

S
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   260.........270.........280.........290.........300.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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