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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank289Aligned Residues248
% Identity24%Templatec3e3pB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase, putative glycogen synthase PDBTitle: glycogen synthase kinase from leishmania major
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70.........80
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Query Sequence  DGELYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKNKPCFQPAMKEANIMKKIK
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Template Sequence  SRKEMDRFQVT. . . . . . . . . . VQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLH
Template Known Secondary structure  TT

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TTT



TT



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   13......20... ......30.........40.........50.........60..
 
   81........90...... ...100......... 110.........120.........130
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Query Sequence  HPNIVSLLQVFETKTR. . . . . . . GYLIMELVEGQEL. . . YEYIKSSGHIEEDEARQIFLQ
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Template Sequence  HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQ
Template Known Secondary structure 
TTB


SS
TT


S
BTT



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   73......80.........90.........100.........110.........120.........130..
 
   131........140.........150..... ....160.........170.........180.......
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Query Sequence  ILSAVSYCHGLGIVHRDLKPDNIMI. . . DDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAF
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Template Sequence  LIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYY
Template Known Secondary structure  TSTTT

B
S


GGGTTTT

GGG
B


TTS


STTS
GGG
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   133......140.........150.........160.........170.........180.........190..
 
   188.190.........200.........210.........220.........230....
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Query Sequence  GAPELFLWKSYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQI. . . . . . . . . . . . .
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Template Sequence  RAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLR
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TT
SS

TSS
SS

SS
S

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   193......200.........210.........220.........230.........240.........250..
 
   235....240.........250.........260.........270.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . LAGVYPAPCGVSNELKDLLSLLMTVNPKYRPTVTEVMKHPW
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Template Sequence  KLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPY
Template Known Secondary structure 
TT


GGG






T
TT

SSS
SSGGGS

TTSGG
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   253......260.........270.........280.........290.........300.........310..
 
   276..
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Query Sequence  LRG
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Template Sequence  FDE
Template Known Secondary structure  GGG
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   313..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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