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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank103Aligned Residues246
% Identity27%Templatec2ivsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase receptor PDBTitle: crystal structure of non-phosphorylated ret tyrosine kinase2 domain
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40........ .50.........60 .........70........
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Query Sequence  SQYKVVRTLGHGTYAKVLLAKHW. . . . . LTGTPVAVKVLL. . KNKPCFQPAMKEANIMKK
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Template Sequence  KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ
Template Known Secondary structure  GG
SSSTGGG
SS

TT

TT
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   722.......730.........740.........750.........760.........770.........780.
 
   7980.........90.........100.........110........ .120.........130
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Query Sequence  IKHPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGH. . . . . . . . IEEDEARQIFLQ
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Template Sequence  VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLRALTMGDLISFAWQ
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TTB


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TT
BTTTSTT


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   782.......790.........800.........810.........820.........830.........840.
 
   131........140.........150.........160.........170......... 180.......
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Query Sequence  ILSAVSYCHGLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLD. . . EHCGAYAF
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Template Sequence  ISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKW
Template Known Secondary structure  TT



SGGGTTT


TT

TTTS

SS


S
GGG
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   858.860.........870.........880.........890.........900.........910.......
 
   188.190.........200.........210....... ..220.........230....... ..240.....
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Query Sequence  GAPELFLWKSYDGTKSDLWALGVILYYMVV. GKVPFDSYIIPELQRQILAG. VYPAPCGV
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Template Sequence  MAIESLFDHIY. TTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNC
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TTS

SSTT

GGGTT





TT
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   918.920........ .930.........940.........950.........960.........970......
 
   246...250.........260.........270..
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Query Sequence  SNELKDLLSLLMTVNPKYRPTVTEVMK
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Template Sequence  SEEMYRLMLQCWKQEPDKRPVFADISK
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T
SSGGGS

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   977..980.........990.........1000...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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