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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank119Aligned Residues239
% Identity29%Templatec4eqmE_
PDB info PDB header:transferaseChain: E: PDB Molecule:protein kinase; PDBTitle: structural analysis of staphylococcus aureus serine/threonine kinase2 pknb
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50.........60 .........70.....
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Query Sequence  EDGELYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLL. . . . KNKPCFQPAMKEANI
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Template Sequence  IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHN
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   2.......10.........20.........30.........40.........50.........60.
 
   76...80.........90.........100.........110.........120.........130.....
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Query Sequence  MKKIKHPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSGHIEEDEARQIFLQILSAV
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Template Sequence  SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGI
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TTB



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   62.......70.........80.........90.........100.........110.........120.
 
   136...140.........150.........160.........170.........180.........190.....
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Query Sequence  SYCHGLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLW
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Template Sequence  KHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIA. . . . . . . . . . . . . KTVQYFSPEQAKG
Template Known Secondary structure  TT






GGG
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   122.......130.........140.........150..... ....160........
 
   196...200.........210.........220.........230.........240 .........250
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Query Sequence  KSYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYP. . . . . APCGVSNELK
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Template Sequence  EAT. DECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLS
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   184.. ...190.........200.........210.........220.........230.........240..
 
   251........260.... .....270..
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Query Sequence  DLLSLLMTVNPKYR. PTVTEVMK
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Template Sequence  NVILRATEKDKANRYKTIQEMKD
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   243......250.........260.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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