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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank138Aligned Residues223
% Identity36%Templatec3cokB_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase plk4; PDBTitle: crystal structure of plk4 kinase
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60. ........70.......
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Query Sequence  GELYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLK. . . . NKPCFQPAMKEANIMK
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Template Sequence  GEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHC
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SSGGG
SSTTT

TT
T
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   5....10.........20.........30.........40.........50.........60....
 
   78.80.........90.........100.........110...... ...120.........130......
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Query Sequence  KIKHPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSS. GHIEEDEARQIFLQILSAVS
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Template Sequence  QLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGML
Template Known Secondary structure  T


TTB


SS


TTT
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   65....70.........80.........90.........100.........110.........120....
 
   137..140.........150.........160.........170.........180.........190......
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Query Sequence  YCHGLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFLWK
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Template Sequence  YLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQ. . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT
S


GGG
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TT
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   125....130.........140.........150.........
 
   197..200.........210.........220.........230.........240.........250......
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Query Sequence  SYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQILAGVYPAPCGVSNELKDLLSLL
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Template Sequence  . . LKLESDVWSLGCMFYTLLIGRPPFNTLN. . . . . . KVVLADYEMPSFLSIEAKDLIHQL
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   160.........170.........180....... ..190.........200.........210.
 
   257..260.........270.......
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Query Sequence  MTVNPKYRPTVTEVMKHPWLR
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Template Sequence  LRRNPADRLSLSSVLDHPFMS
Template Known Secondary structure  S
SSGGGS

TTSTTT
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   245....250.........260.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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