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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank11Aligned Residues247
% Identity30%Templatec3qa8A_
PDB info PDB header:immune system, signaling proteinChain: A: PDB Molecule:mgc80376 protein; PDBTitle: crystal structure of inhibitor of kappa b kinase beta
Resolution3.60 Å
Model Dimensions (Å)X:63.013 Y:55.195 Z:41.551

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60. ........70.........80......
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Query Sequence  KVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLK. . NKPCFQPAMKEANIMKKIKHPNIVS
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Template Sequence  EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS
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   16...20.........30.........40.........50.........60.........70.....
 
   87..90....... ..100.........110........ .120.........130.......
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Query Sequence  LLQVFETKTRG. . . . . . YLIMELVEGQELYEYIKSSGH. . . IEEDEARQIFLQILSAVSY
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Template Sequence  AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY
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   76...80.........90.........100.........110.........120.........130.....
 
   138.140.........150.........160 .........170.........180.........190....
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Query Sequence  CHGLGIVHRDLKPDNIMIDDKGS. . . IKIIDFGLSTQVKPGDLLDEHCGAYAFGAPELFL
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Template Sequence  LHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLE
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   136...140.........150.........160.........170.........180.........190.....
 
   195....200.........210.........220.........230..... .
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Query Sequence  WKSYDGTKSDLWALGVILYYMVVGKVPFDSYIIPELQRQIL. . . . . . . . . . . . . . . . . . A
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Template Sequence  QKKY. TVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVRIVVYDDLTGAVKFSSVLP
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   196... 200.........210.........220.........230.........240.........250....
 
   237..240.........250.........260.........270......
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Query Sequence  GVYPAPCGVSNELKDLLSLLMTVNPKYRPTVTEVMKHPWL
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Template Sequence  TPNHLSGILAGKLERWLQCMLMWHQRTDPQNPNVGCFQAL
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   261........270.........280.........290.........300
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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