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Job DescriptionA0AUV4
Confidence100.00%DateTue Jul 30 13:10:30 BST 2013
Rank114Aligned Residues246
% Identity24%Templatec3g0eA_
PDB info PDB header:transferaseChain: A: PDB Molecule:mast/stem cell growth factor receptor; PDBTitle: kit kinase domain in complex with sunitinib
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40...... ...50.........60 .........70........
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Query Sequence  SQYKVVRTLGHGTYAKVLLAK. . . . . HWLTGTPVAVKVLL. . KNKPCFQPAMKEANIMKK
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Template Sequence  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY
Template Known Secondary structure  GG
SSSSSSTT

TT

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   587..590.........600.........610.........620.........630.........640......
 
   79 80.........90.........100.........110... ......
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Query Sequence  I. KHPNIVSLLQVFETKTRGYLIMELVEGQELYEYI. . . . . . . . . . . . . . . . . . KSSGHI
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Template Sequence  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL
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TTB


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BGGGGS
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   647..650.........660.........670.........680.........690.........700......
 
   120.........130.........140.........150.........160.........170..... .
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Query Sequence  EEDEARQIFLQILSAVSYCHGLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPG. . . D
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Template Sequence  DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV
Template Known Secondary structure 
TT
S

SGGGTTT


GGG

GGG
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   765....770.........780.........790.........800.........810.........820....
 
   177..180.........190.........200.........210....... ..220.........230.....
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Query Sequence  LLDEHCGAYAFGAPELFLWKSYDGTKSDLWALGVILYYMVV. GKVPFDSYIIPELQRQIL
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Template Sequence  VKGNARLPVKWMAPESIFNCVY. TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI
Template Known Secondary structure  TT
GGGS
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   825....830.........840...... ...850.........860.........870.........880...
 
   236. ..240.........250.........260.........270..
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Query Sequence  AG. . VYPAPCGVSNELKDLLSLLMTVNPKYRPTVTEVMK
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Template Sequence  KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ
Template Known Secondary structure  TT





TT

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   884.....890.........900.........910.........920..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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