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Job DescriptionA0AUV4
Confidence99.31%DateTue Jul 30 13:10:30 BST 2013
Rank326Aligned Residues185
% Identity16%Templatec3r78B_
PDB info PDB header:transferaseChain: B: PDB Molecule:aminoglycoside 3'-phosphotransferase apha1-iab; PDBTitle: crystal structure of the aminoglycoside phosphotransferase aph(3')-ia,2 atp-bound
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60......
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Query Sequence  EELPPPSPQPSNPEDGELYSQYKVVRTLGHGTYAKVLLAKHWLTGTPVAVKVLLKNKPCF
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Template Sequence  RETSCSRPRLNSNLDADLYG. YRWARDNVGQSGATIYRLYGKPNAPELFLKHGK. . GSVA
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SSSTTTT.


S

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   6...10.........20..... ....30.........40.........50........ .60..
 
   67..70......... 80.........90.........100.........110.......
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Query Sequence  QPAMKEANIMKKI. KHPNIVSLLQVFETKTRGYLIMELVEGQELYEYIKSSG. . . . . . . .
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Template Sequence  NDVTDEXVRLNWLTAFXPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEYPDSGENIVD
Template Known Secondary structure  TTTS




SS


S
GGG
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   63......70.........80.........90.........100.........110.........120..
 
   118.120.........130.
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HIEEDEARQIFLQI
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Template Sequence  ALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRXNNGLVDASDFDDERNGWPVEQVWKEX
Template Known Secondary structure  S
GGG


B

TT


GGG

GGGTT

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   123......130.........140.........150.........160.........170.........180..
 
   132.......140.........150.........160.........170.........180.........190.
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Query Sequence  LSAVSYCHGLGIVHRDLKPDNIMIDDKGSIKIIDFGLSTQVKPGDLLDEHCGAYAFGAPE
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Template Sequence  HKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIADRYQDLAILWNCLGEFSPS
Template Known Secondary structure  TT






S


GGGTT


TT
TTTT
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   183......190.........200.........210.........220.........230.........240..
 
   192..
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Query Sequence  LFL
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Template Conservation     
Template Sequence  LQK
Template Known Secondary structure 
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   243..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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