Phyre 2 alignment of O89100 with d1spka

Job Description O89100
Confidence 99.69% Date Wed Jul 10 14:33:29 BST 2013

Rank 144 Aligned Residues 63

% Identity 19% Template d1spka_

SCOP info SH3-like barrel SH3-domain SH3-domain

Resolution UNK

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																		.																				.											.	.
Query SS confidence																		.																				.											.	.
Query Sequence	Q	A	A	G	R	V	R	W	A	R	A	L	Y	D	F	E	A	.	L	E	E	D	E	L	G	F	R	S	G	E	V	V	E	V	L	D	S	.	S	N	P	S	W	W	T	G	R	L	.	.	H	N	K	L	G	L	F	P	A	N
Query Conservation																		.																				.											.	.
Alig confidence																		.																				.											.	.
Template Conservation
Template Sequence	S	S	G	S	S	G	Q	K	V	K	T	I	F	P	H	T	A	G	N	N	K	T	L	L	S	F	A	Q	G	D	V	L	T	L	L	I	P	E	E	K	D	G	W	L	Y	G	E	H	D	T	T	K	A	R	G	W	F	P	S	S
Template Known Secondary structure			S	S		S						S	S		B			S	S		S	S	B			B		T	T								S	S		B	T	T							T	T	T								G	G
Template Predicted Secondary structure
Template SS confidence
	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.

	316	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Y	V	A	P	M	M	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence	Y	T	K	L	L	S	G
Template Known Secondary structure	G					S	S
Template Predicted Secondary structure
Template SS confidence
	62	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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