Job Description O89100 Confidence 78.78% Date Wed Jul 10 14:33:29 BST 2013 Rank 319 Aligned Residues 78 % Identity 18% Template c2xp1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6 Resolution 2.20 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	E	F	P	E	W	F	H	E	G	L	S	R	H	Q	A	E	N	L	L	M	G	K	D	I	G	F	F	I	I	R	A	S	Q	S	S	P	G	D	F	S	I	S	V	R	H	E	D	D	V	Q	H	F	K	V	M	R	D	T
Query Conservation
Alig confidence											.														.											.
Template Conservation											.														.											.
Template Sequence		R	F	Y	K	H	P	L	F	K	.	N	F	N	V	T	E	S	E	N	Y	L	R	S	.	S	T	D	D	F	L	I	R	K	G	.	S	R	H	G	Y	C	V	L	V	I	K	F	A	S	D	V	F	V	H	M	K	I	E	E	H
Template Known Secondary structure		G	G	G	G	S	T	T			.														.	S	S									.	S	S	T	T										T	T
Template Predicted Secondary structure											.														.											.
Template SS confidence
		788	.	790	.	.	.	.	.	.		.	.	.	800	.	.	.	.	.	.	.	.	.		810	.	.	.	.	.	.	.	.	.		820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	N	Y	F	L	W	T	E	K	F	P	S	L	N	K	L	V	D	Y	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	H	Y	T	C	S	N	K	H	F	E	D	I	D	E	V	I	S	V	Y
Template Known Secondary structure		S	S					T	T				S	S								T
Template Predicted Secondary structure
Template SS confidence
		845	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D