Return to main results Retrieve Phyre Job Id

Job DescriptionO89100
Confidence99.76%DateWed Jul 10 14:33:29 BST 2013
Rank46Aligned Residues56
% Identity36%Templatec2nwmA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:vinexin; PDBTitle: solution structure of the first sh3 domain of human vinexin2 and its interaction with the peptides from vinculin
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   265....270.........280.........290.........300.........310.........320
Predicted Secondary structure 



























Query SS confidence 























































Query Sequence  VRWARALYDFEALEEDELGFRSGEVVEVLDSSNPSWWTGRLHNKLGLFPANYVAPM
Query Conservation       




 
   



   

 
 

   
 


 
   
  
 

 


 
 
Alig confidence 























































Template Conservation     
 




      


   

 
 
       
  
   
  
 

  


 
Template Sequence  MKAARLKFDFQAQSPKELTLQKGDIVYIHKEVDKNWLEGEHHGRLGIFPANYVEVL
Template Known Secondary structure 


S
B


STTB

B
TT


TTT
TT
GGG
Template Predicted Secondary structure 























Template SS confidence 























































   0.........10.........20.........30.........40.........50.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D