Return to main results Retrieve Phyre Job Id

Job DescriptionO89100
Confidence99.67%DateWed Jul 10 14:33:29 BST 2013
Rank173Aligned Residues61
% Identity30%Templatec2jw4A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cytoplasmic protein nck1; PDBTitle: nmr solution structure of the n-terminal sh3 domain of2 human nckalpha
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   260.........270.........280.........290.........300.........310.........
Predicted Secondary structure 
































Query SS confidence 



























































Query Sequence  QAAGRVRWARALYDFEALEEDELGFRSGEVVEVLDSSNPSWWTGRLHNKLGLFPANYVAP
Query Conservation            




 
   



   

 
 

   
 


 
   
  
 

 


 
Alig confidence 



























































Template Conservation 
         

  
 
    


   

 
 

     

         
 

  

  
Template Sequence  STMAEEVVVVAKFDYVAQQEQELDIKKNERLWLLDDSKSWWRVRNSMNKTGFVPSNYVER
Template Known Secondary structure 

SS


SS



SSTTS



TT

SSSS
TTS

TTS
Template Predicted Secondary structure 
























Template SS confidence 



























































   2.......10.........20.........30.........40.........50.........60.
 
   320
Predicted Secondary structure 
Query SS confidence 
Query Sequence  M
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  K
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   62
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D