 |
| Job Description | O89100 | | Confidence | 99.67% | Date | Wed Jul 10 14:33:29 BST 2013 |
| Rank | 168 | Aligned Residues | 73 |
| % Identity | 27% | Template | c2d8hA_ |
| PDB info |
PDB header:unknown function | Chain: A: PDB Molecule:sh3yl1 protein; |
PDBTitle: solution structure of the sh3 domain of hypothetical2 protein sh3yl1
|
| Resolution | UNK |
|
 |
|   |   |
249 | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | |
|
300 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| . | . |  |  |  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
| Query Sequence |   |
M | H | R | R | H | T | D | P | V | Q | L | Q | A | A | G | R | V | R | W | A | R | A | L | Y | D | F | E | A | L | E | E | D | E | L | G | F | R | S | G | E | V | V | E | V | L | D | S | S | N | P | S | . |
. |
W | W | T | G | R | L | H |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |
|
|
|
|   |   |   |
|
|   |
|   |
|
|   |   |   |
|   |
| . | . |
|
|   |
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
|   |
|   |   |   |   |
|
|
|   |   |   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
| Template Sequence |   |
G | S | S | G | S | S | G | H | E | R | V | G | N | L | N | Q | P | I | E | V | T | A | L | Y | S | F | E | G | Q | Q | P | G | D | L | N | F | Q | A | G | D | R | I | T | V | I | S | K | T | D | S | H | F | D | W | W | E | G | K | L | R |
| Template Known Secondary structure |   |
|
|
| S | S |
|
|
|
| S | S |
|
|
| S | S |
|  |  |  |  |
| S | S |
|  |  |
| S | S | T | T | B |
|  |  |
| T | T |
|  |  |  |  |  |  |
|
| S |
| S | S | S |  |  |  |  |  |  | T |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 |
|   |
|   |   |
307 | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
N | K | L | G | L | F | P | A | N | Y | V | A | P | M | M |
| Query Conservation |   |
|   |   |
|   |
|
|   |
|
|
|   |
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |
|   |   |
|   |   |
|
|
|   |   |   |
| Template Sequence |   |
G | Q | T | G | I | F | P | A | N | Y | V | T | M | N | S |
| Template Known Secondary structure |   |
T |  |  |  |  |  |  | G | G | G |
|
| B |
|
|
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
61 | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|