Job Description O89100 Confidence 99.91% Date Wed Jul 10 14:33:29 BST 2013 Rank 8 Aligned Residues 175 % Identity 15% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK Model Dimensions (Å) X:72.721 Y:156.195 Z:94.379

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		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	G	T	Q	D	Q	G	H	R	G	N	S	L	D	R	R	S	Q	G	G	P	H	P	S	G	T	V	G	E	E	I	R	P	S	V	N	R	K	L	S	D	H	L	P	L	G	P	Q	Q	F	H	P	H	Q	Q	P	S	P	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	G	A	T	L	P	K	S	P	S	Q	L	R	K	G	P	P	V	P	P	P	P	K	H	T	P	S	K	E	V	K	Q	E	Q	I	L	S	L	F	E	D	T	F	V	P	E	I	S	V	T	T	P	S	Q	P	A	E	A	S
Template Known Secondary structure														S										S
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	P	G	P	Q	P	P	Q	Q	Q	R	Y	L	Q	H	F	H	Q	D	R	R	G	G	S	L	D	I	N	D	G	H	C	G	L	G	S	E	V	N	A	T	L	M	H	R	R	H	T	D	P	V	Q	L	Q	A	A	G	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	A	G	G	T	Q	P	A	A	G	A	Q	E	P	G	E	T	A	A	S	E	A	A	S	S	S	L	P	A	V	V	V	E	T	F	P	A	T	V	N	G	T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M
Template Known Secondary structure						S	S																																															S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.						.	.	.	.	.	.	300	.	.	.											.	.	.	.	.	.	310
Predicted Secondary structure																														.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query Sequence		R	W	A	R	A	L	Y	D	F	E	A	L	E	E	D	E	L	G	F	R	S	G	E	V	V	E	V	L	.	.	.	.	.	D	S	S	N	P	S	W	W	T	G	.	.	.	.	.	.	.	.	.	.	R	L	H	N	K	L	G
Query Conservation																														.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	K	V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q	L	K	A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G
Template Known Secondary structure							S	S		B				S	T	T				B		S	S									S		G	G	G	S		T	T												T	G	G	G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
		311	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	P	A	N	Y	V	A	P	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	F	P	E	N	F	T	E	R	V
Template Known Secondary structure					S	T	T
Template Predicted Secondary structure
Template SS confidence
		472	.	.	.	.	.	.	.	480	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D