Job Description O89100 Confidence 94.15% Date Wed Jul 10 14:33:29 BST 2013 Rank 281 Aligned Residues 82 % Identity 21% Template c1ka6A_ PDB info PDB header:immune system Chain: A: PDB Molecule:sh2 domain protein 1a; PDBTitle: sap/sh2d1a bound to peptide n-py Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		E	W	F	H	E	G	L	S	R	H	Q	A	E	N	L	L	M	G	K	D	.	I	G	F	F	I	I	R	A	S	Q	S	S	P	G	D	F	S	I	S	V	R	H	E	D	D	V	Q	H	F	K	V	M	R	D	T	K	G	N	Y
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		A	V	Y	H	G	K	I	S	R	E	T	G	E	K	L	L	L	A	T	G	L	D	G	S	Y	L	L	R	D	S	E	S	V	P	G	V	Y	C	L	C	V	L	Y	H	G	Y	I	Y	T	Y	R	V	S	Q	T	E	T	G	S	W
Template Known Secondary structure		S	S	B			S																T	T								S	S	S	T	T								S	S	S											T	T	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		116	.							.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.
Query Sequence		F	L	.	.	.	.	.	.	W	T	E	K	F	P	S	L	N	K	L	V	D	Y	Y	R	T	T	S	I	S
Query Conservation				.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.
Template Conservation
Template Sequence		S	A	E	T	A	P	G	V	H	K	R	Y	F	R	K	I	K	N	L	I	S	A	F	Q	K	P	D	Q	G
Template Known Secondary structure						S	T	T	S						S	S								T	T	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D