Phyre 2 alignment of Q8BGA5 with d2ctka1

Job Description Q8BGA5
Confidence 97.41% Date Tue Jul 30 13:13:37 BST 2013

Rank 15 Aligned Residues 65

% Identity 17% Template d2ctka1

SCOP info Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I) Eukaryotic type KH-domain (KH-domain type I)

Resolution UNK

Model Dimensions (Å) X:40.028 Y:33.841 Z:24.685

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.						.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																															.	.	.	.	.
Query SS confidence																															.	.	.	.	.
Query Sequence	V	K	R	R	Q	R	L	I	G	P	K	G	S	T	L	K	A	L	E	L	L	T	N	C	Y	V	M	V	Q	G	.	.	.	.	.	N	T	V	S	A	I	G	P	F	S	G	L	K	E	V	R	K	V	V	L	D	T	M	K	N
Query Conservation																															.	.	.	.	.
Alig confidence																															.	.	.	.	.
Template Conservation
Template Sequence	F	D	L	H	R	Y	V	I	G	Q	K	G	S	G	I	R	K	M	M	D	E	F	E	V	N	I	H	V	P	A	P	E	L	Q	S	D	I	I	A	I	T	G	L	A	A	N	L	D	R	A	K	A	G	L	L	E	R	V	K	E
Template Known Secondary structure										S	S	S										T									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
	25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.

	212	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence	I	H	P	I	Y	N	I	K	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence	L	Q	A	E	Q	E	D	R	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
	85	.	.	.	.	90	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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