Job Description Q8BGA5 Confidence 97.07% Date Tue Jul 30 13:13:37 BST 2013 Rank 31 Aligned Residues 69 % Identity 30% Template c4jvyA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:female germline-specific tumor suppressor gld-1; PDBTitle: structure of the star (signal transduction and activation of rna)2 domain of gld-1 bound to rna Resolution 2.85 Å

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		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.																										.	.	.	190	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	R	L	I	G	P	K	G	S	T	L	K	A	L	E	L	L	T	N	C	Y	V	M	V	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	V	S	A	I	G	P
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	R	I	L	G	P	R	G	M	T	A	K	Q	L	E	Q	D	T	G	C	K	I	M	V	R	G	K	G	S	M	R	D	K	S	K	E	S	A	H	R	G	K	A	N	W	E	H	L	E	D	D	L	H	V	L	V	Q	C	E
Template Known Secondary structure								G	G	G											T							S	T	T		S	S	S								T	T	S	T	T		G	G	G	G	S		S
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		195	.	.							.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.
Query Sequence		F	S	G	.	.	.	.	.	.	L	K	E	V	R	K	V	V	L	D	T	M	K	N	I	H	P	I	Y	N	I	K	T	L	M	I	K	R	E	L	A
Query Conservation					.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.
Template Conservation
Template Sequence		D	T	E	N	R	V	H	I	K	L	Q	A	A	L	E	Q	V	K	K	L	L	I	P	A	P	E	G	T	D	E	L	K	R	K	Q	L	M	E	L	A
Template Known Secondary structure				T	T	T																T	S				T	T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D