Job Description Q8BGA5 Confidence 90.40% Date Tue Jul 30 13:13:37 BST 2013 Rank 47 Aligned Residues 77 % Identity 19% Template c3gkuB_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:probable rna-binding protein; PDBTitle: crystal structure of a probable rna-binding protein from clostridium2 symbiosum atcc 14940 Resolution 2.95 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.										.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																								.																.	.	.	.	.	.	.	.	.
Query SS confidence																								.																.	.	.	.	.	.	.	.	.
Query Sequence		Q	R	L	I	G	P	K	G	S	T	L	K	A	L	E	L	L	T	N	C	Y	V	.	M	V	Q	G	N	T	V	S	A	I	G	P	F	S	G	.	.	.	.	.	.	.	.	.	L	K	E	V	R	K	V	V	L	D	T	M	K
Query Conservation																								.																.	.	.	.	.	.	.	.	.
Alig confidence																								.																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	L	I	G	K	R	G	Q	T	L	D	S	L	Q	Y	L	V	S	L	V	V	N	K	S	S	S	D	Y	I	R	V	K	L	D	T	E	N	Y	R	E	R	R	K	E	T	L	E	T	L	A	K	N	I	A	Y	K	V	K	R
Template Known Secondary structure		G	G	G	T	T	T																			T		S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
							211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	N	I	H	P	I	Y	N	I	K	T	L	M	I	K	R	E	L	A	K	D	S	E	L	R	S	Q	S
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		T	K	R	S	V	S	L	E	P	X	N	P	Y	E	R	R	I	I	H	A	A	L	Q	N	D	K	Y	V	V	T	R	S
Template Known Secondary structure			S	S																			T	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D