Job Description Q8BGA5 Confidence 23.76% Date Tue Jul 30 13:13:37 BST 2013 Rank 105 Aligned Residues 73 % Identity 8% Template c3c1qA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:general secretion pathway protein f; PDBTitle: the three-dimensional structure of the cytoplasmic domains of epsf2 from the type 2 secretion system of vibrio cholerae Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		T	F	D	P	Y	I	I	I	R	A	R	D	L	I	K	L	L	A	R	S	V	S	F	E	Q	A	V	R	I	L	Q	.	.	.	D	D	V	A	C	D	I	I	K	I	G	S	L	V	R	N	K	E	R	F	V	K	R	R	Q	R
Query Conservation																																	.	.	.
Alig confidence																																	.	.	.
Template Conservation
Template Sequence		S	E	K	P	R	I	R	T	X	L	V	A	V	R	A	K	V	T	E	G	Y	T	L	S	D	S	L	G	D	Y	P	H	V	F	D	E	L	F	R	S	X	V	A	A	G	E	K	S	G	H	L	D	S	V	L	E	R	L	A	D
Template Known Secondary structure			S																	T	T								T	T		T	T	T	S															T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	G	P	K	G	S	T	L	K	A	L	E	L	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	E	N	R	Q	K	X	R	S	K	L	Q	Q	A	S
Template Known Secondary structure															T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D