Job Description Q8BGA5 Confidence 26.82% Date Tue Jul 30 13:13:37 BST 2013 Rank 93 Aligned Residues 111 % Identity 23% Template c2ycbA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cleavage and polyadenylation specificity factor; PDBTitle: structure of the archaeal beta-casp protein with n-terminal2 kh domains from methanothermobacter thermautotrophicus Resolution 3.10 Å

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		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.
Query Sequence		L	K	E	C	W	P	L	V	Q	K	A	L	N	E	H	H	V	K	A	T	L	D	L	I	E	G	S	M	T	V	C	T	T	K	K	T	F	D	P	Y	I	I	I	R	A	R	D	L	I	K	L	L	A	R	.	.	.	.	.	.
Query Conservation																																																								.	.	.	.	.	.
Alig confidence																																	.	.	.	.																				.	.	.	.	.	.
Template Conservation																																	.	.	.	.
Template Sequence		L	E	E	I	K	R	T	I	M	Q	R	L	P	E	R	V	Q	V	A	K	V	E	F	E	G	P	E	V	V	I	Y	.	.	.	.	T	K	N	P	E	I	I	T	E	N	G	N	L	I	R	D	I	A	K	D	I	R	K	R	I
Template Known Secondary structure												T	S		T	T	S									T	T						.	.	.	.		S		T					S		T											T	S
Template Predicted Secondary structure																																	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
										125	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.													.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.													.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	S	V	S	F	E	Q	A	V	R	I	L	Q	.	.	.	.	D	D	V	A	C	D	I	I	K	I	G	S	L	V	R	N	K	E	R	F	V	K	R	R	Q	R	L	I	G	P	K	G	S	T	L	K
Query Conservation		.	.	.	.	.	.	.	.													.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation
Template Sequence		I	I	R	S	D	R	S	V	L	M	D	P	E	K	A	I	R	K	I	H	E	I	V	P	E	E	A	K	I	T	N	I	S	F	D	D	V	T	C	E	V	I	I	E	A	R	K	P	G	L	V	I	G	K	Y	G	S	T	S	R
Template Known Secondary structure							G	G	G														T	S		S	T	T									T	T	T	T							S		T						T	T	S
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		173	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	E	L	L	T	N	C	Y	V	M	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	V	K	N	T	G	W	A	P	K	I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D