Job Description Q8BGA5 Confidence 97.76% Date Tue Jul 30 13:13:37 BST 2013 Rank 7 Aligned Residues 144 % Identity 16% Template c2jzxA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:poly(rc)-binding protein 2; PDBTitle: pcbp2 kh1-kh2 domains Resolution UNK Model Dimensions (Å) X:48.880 Y:45.714 Z:39.803

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		S	F	A	T	L	F	P	K	Y	R	E	A	Y	L	K	E	C	W	P	L	V	Q	K	A	L	N	E	H	.	H	V	K	A	T	L	D	L	I	E	G	S	M	T	V	C	T	T	K	K	T	F	D	P	Y	I	I	I	R	A	R
Query Conservation																														.
Alig confidence																														.
Template Conservation
Template Sequence		T	I	R	L	L	M	H	G	K	E	V	G	S	I	I	G	K	K	G	E	S	V	K	K	M	R	E	E	S	G	A	R	I	N	I	S	E	G	N	C	P	E	R	I	I	T	L	A	G	P	T	N	A	I	F	K	A	F	A	M
Template Known Secondary structure																		G	G	G												S								T	T	T
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	I	K	L	L	A	R	S	V	S	F	E	Q	A	V	R	I	L	Q	D	D	V	A	C	D	I	I	K	I	G	S	L	V	R	N	K	E	R	F	V	K	R	R	Q	R	L	I	G	P	K	G	S	T	L	K	A	L	E	L
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.
Template Sequence		I	I	D	K	L	E	E	D	I	S	S	S	M	T	N	S	T	A	A	S	R	P	P	V	T	L	R	L	V	V	.	.	.	.	.	.	.	.	.	P	A	S	Q	C	G	S	L	I	G	K	G	G	C	K	I	K	E	I	R	E
Template Known Secondary structure											T	S				S	S	S						S								.	.	.	.	.	.	.	.	.											G	G	G
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.										.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.									.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure														.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.
Query Sequence		L	T	N	C	Y	V	M	V	Q	G	N	T	.	.	.	.	.	.	.	.	V	S	A	I	G	P	F	S	G	L	K	E	V	R	K	V	V	L	D	T	M	K
Query Conservation														.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	T	G	A	Q	V	Q	V	A	G	D	M	L	P	N	S	T	E	R	A	I	T	I	A	G	I	P	Q	S	I	I	E	C	V	K	Q	I	C	V	V	M	L
Template Known Secondary structure				S	S									S	T	T
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D