Job Description Q8BGA5 Confidence 99.88% Date Tue Jul 30 13:13:37 BST 2013 Rank 1 Aligned Residues 179 % Identity 19% Template c1tuaA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ape0754; PDBTitle: 1.5 a crystal structure of a protein of unknown function2 ape0754 from aeropyrum pernix Resolution 1.50 Å Model Dimensions (Å) X:56.242 Y:57.357 Z:39.801

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		F	A	T	L	F	P	K	Y	R	E	A	Y	L	K	E	C	W	P	L	V	Q	K	A	L	N	E	H	.	H	V	K	A	T	L	D	L	I	E	G	S	M	T	V	C	T	T	K	K	T	F	D	P	Y	I	I	I	R	A	R	D
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		I	Y	V	K	V	K	P	E	R	L	G	A	V	I	G	P	R	G	E	V	K	A	E	I	M	R	R	T	G	T	V	I	T	V	D	T	E	N	S	M	V	I	V	E	P	E	A	E	G	I	P	P	V	N	L	M	K	A	A	E
Template Known Secondary structure								G	G	G							G	G	G											T							T	T	T	T							S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		L	I	K	L	L	A	R	S	V	S	F	E	Q	A	V	R	I	L	Q	D	D	V	A	C	D	I	I	K	I	G	S	L	V	R	N	K	E	R	F	V	K	R	.	R	Q	R	L	I	G	P	K	G	S	T	L	K	A	L	E	L
Query Conservation																																												.
Alig confidence																																												.
Template Conservation
Template Sequence		V	V	K	A	I	S	L	G	F	P	P	E	K	A	F	R	L	L	E	E	D	Q	I	L	V	V	V	D	L	K	Q	V	V	G	D	S	Q	N	H	L	K	R	I	K	G	R	I	I	G	E	G	G	R	A	R	R	T	I	E	E
Template Known Secondary structure									T							G	G	G	G	S	T	T								T					T	T															G	G	G
Template Predicted Secondary structure
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		L	T	N	C	Y	V	M	V	Q	G	N	T	V	S	A	I	G	P	F	S	G	L	K	E	V	R	K	V	V	L	D	T	M	K	N	I	H	P	.	.	I	Y	N	I	K	T	L	M	I	K	R	E	L	A	K	D	S	E	L	R
Query Conservation																																								.	.
Alig confidence																																								.	.									.
Template Conservation																																																		.
Template Sequence		M	T	D	T	Y	I	N	V	G	E	Y	E	V	A	I	I	G	D	Y	E	R	A	M	A	A	K	Q	A	I	E	M	L	A	E	G	R	M	H	S	T	V	Y	R	H	L	E	R	I	.	M	R	E	I	K	R	R	E	R	L	K
Template Known Secondary structure				T							S	S																							T	T														.
Template Predicted Secondary structure																																																		.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.
		235	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	S	W	E	R
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	M	W	A	R
Template Known Secondary structure		.	.
Template Predicted Secondary structure		.	.
Template SS confidence
				184	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D