Job Description Q8BGA5 Confidence 97.57% Date Tue Jul 30 13:13:37 BST 2013 Rank 10 Aligned Residues 133 % Identity 15% Template c1j4wA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:fuse binding protein; PDBTitle: complex of the kh3 and kh4 domains of fbp with a2 single_stranded 29mer dna oligonucleotide from the fuse3 element of the c-myc oncogene Resolution UNK Model Dimensions (Å) X:85.344 Y:72.093 Z:37.043

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		E	S	S	F	A	T	L	F	P	K	Y	R	E	A	Y	L	K	E	C	W	P	L	V	Q	K	A	L	N	E	H	.	H	V	K	A	T	L	D	L	I	E	G	S	M	T	V	C	T	T	K	K	T	F	D	P	Y	I	I	I	R
Query Conservation																																.
Alig confidence																																.
Template Conservation
Template Sequence		S	H	M	I	D	V	P	I	P	R	F	A	V	G	I	V	I	G	R	N	G	E	M	I	K	K	I	Q	N	D	A	G	V	R	I	Q	F	K	P	D	D	G	T	T	P	E	R	I	A	Q	I	T	G	P	P	D	R	A	Q	H
Template Known Secondary structure																				G	G	G																				T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	D	L	I	K	L	L	A	R	S	V	S	F	E	Q	A	V	R	I	L	Q	D	D	V	A	C	D	I	I	K	I	G	S	L	V	R	N	K	E	R	F	V	K	R	R	Q	R	L	I	G	P	K	G	S	T	L	K	A	L
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Sequence		A	A	E	I	I	.	.	.	.	.	.	.	.	.	.	.	.	T	D	L	L	R	S	V	Q	Q	E	F	N	F	I	V	P	T	G	K	.	.	.	.	.	.	.	.	.	T	G	L	I	I	G	K	G	G	E	T	I	K	S	I
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.																	T	T	T	.	.	.	.	.	.	.	.	.							G	G	G
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.													.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.										.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		175	.	.	.	.	180	.	.	.	.	.	.	.	.											.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	L	T	N	C	Y	V	M	V	Q	G	N	T	.	.	.	.	.	.	.	.	.	.	V	S	A	I	G	P	F	S	G	L	K	E	V	R	K	V	V	L	D	T	M
Query Conservation																.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	Q	Q	S	G	A	R	I	E	L	Q	R	N	P	P	P	N	A	D	P	N	M	K	L	F	T	I	R	G	T	P	Q	Q	I	D	Y	A	R	Q	L	I	E	E	K	I
Template Known Secondary structure																T	T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D