Phyre 2 Results for A2A5E6

Phyre Home | Retrieve Phyre Job Id

Email | l.a.kelley@imperial.ac.uk
Description | A2A5E6
Date | Wed Jul 10 14:22:42 BST 2013
Unique Job ID | 4f3837bd0100a348
Sequence | MLLGPASGSP ... Download FASTA

Summary |

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å): | X:54.988 Y:47.759 Z:51.477
| Close Jmol

Model (left) based on template c4ijdA_
Top template information
PDB header:transferase Chain: A: PDB Molecule:histone-lysine n-methyltransferase prdm9; PDBTitle: crystal structure of methyltransferase domain of human pr domain-2 containing protein 9
Confidence and coverage
Confidence: | 99.6% | Coverage: | 49%
211 residues ( 49% of your sequence) have been modelled with 99.6% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
262 residues ( 61%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
Warning: 76% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | L | L | G | P | A | S | G | S | P | S | P | L | L | A | S | L | T | L | P | A | R | P | L | Q | P | P | L | D | L | K | H | L | L | A | F | H | L | N | G | T | T | P | L | S | L | F | P | N | F | S | T | M | D | P | V | Q | K | A | V
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  | ? | ? | ? | ? | ? |  |  |  |  | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | I | S | H | T | F | G | V | P | S | P | L | K | K | K | L | F | I | S | C | N | I | C | H | L | R | F | N | S | A | N | Q | A | E | A | H | Y | K | G | H | R | H | A | R | K | L | K | A | V | E | A | A | K | S | K | Q | R | P | R | N | P
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | T | T | N | G | T | V | V | S | S | A | S | P | P | A | S | G | S | P | G | T | P | Q | S | K | G | P | A | S | P | P | L | G | P | S | L | Q | L | P | P | T | P | D | P | S | A | G | D | P | V | H | S | A | G | D | P | V | H | S | E | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  | ? |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240
Sequence |  | C | D | A | A | A | S | S | S | S | S | S | C | P | P | C | S | P | D | P | S | R | E | A | P | G | P | E | P | A | E | G | A | V | G | S | G | V | N | G | E | G | R | G | E | K | G | R | L | Y | C | P | T | C | K | V | T | V | N | S | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300
Sequence |  | S | Q | L | Q | A | H | N | T | G | A | K | H | R | W | M | V | E | G | H | Q | G | A | P | R | R | G | R | G | R | P | V | S | R | G | G | T | G | H | K | T | K | R | V | I | G | N | R | G | G | R | Q | G | P | S | P | P | F | H | C | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  | ? | ? |  | ? | ? |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360
Sequence |  | L | C | Q | L | H | V | N | S | E | T | Q | L | K | Q | H | M | S | S | R | R | H | K | D | R | L | A | G | K | P | P | K | S | S | S | Q | H | N | K | L | Q | K | H | T | A | L | A | V | S | V | L | K | S | K | L | A | L | Q | K | Q | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420
Sequence |  | T | K | T | L | A | A | R | F | L | P | G | P | L | P | T | T | A | A | A | I | C | A | L | P | G | P | L | T | L | R | P | A | A | T | A | A | A | T | L | F | P | A | P | V | L | G | P | A | L | F | R | S | P | A | G | A | V | R | P | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  | ? | ? | ? | ? | ? |  | ? | ? | ? | ? | ? | ? | ? | ? |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | .
Sequence |  | A | G | P | I | L | F | A | P | Y
Secondary structure |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  | ? | ? | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)
? | Disordered ( 76%)
| Alpha helix ( 22%)
| Beta strand ( 3%)

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| c4ijdA_ |

### PDB 4ijd chain A

Region: 71 - 320
Aligned: 211
Modelled: 212
Confidence: 99.6%
Identity: 9%
PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase prdm9;
PDBTitle: crystal structure of methyltransferase domain of human pr domain-2 containing protein 9

Phyre2
2 |
| c1tf6D_ |

### PDB 1tf6 chain D

Region: 71 - 321
Aligned: 180
Modelled: 180
Confidence: 99.5%
Identity: 12%
PDB header:transcription/dna
Chain: D: PDB Molecule:protein (transcription factor iiia);
PDBTitle: co-crystal structure of xenopus tfiiia zinc finger domain2 bound to the 5s ribosomal rna gene internal control region

Phyre2
3 |
| c2dmiA_ |

### PDB 2dmi chain A

Region: 210 - 328
Aligned: 111
Modelled: 111
Confidence: 99.4%
Identity: 15%
PDB header:transcription
Chain: A: PDB Molecule:teashirt homolog 3;
PDBTitle: solution structure of the first and the second zf-c2h2 like2 domains of human teashirt homolog 3

Phyre2
4 |
| c1zu1A_ |

### PDB 1zu1 chain A

Region: 220 - 325
Aligned: 98
Modelled: 106
Confidence: 99.4%
Identity: 21%
PDB header:rna binding protein
Chain: A: PDB Molecule:rna binding protein zfa;
PDBTitle: solution structure of the n-terminal zinc fingers of the2 xenopus laevis double stranded rna binding protein zfa

Phyre2
5 |
| c2rpcA_ |

### PDB 2rpc chain A

Region: 65 - 320
Aligned: 132
Modelled: 141
Confidence: 99.1%
Identity: 14%
PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein zic 3;
PDBTitle: solution structure of the tandem zf-c2h2 domains from the2 human zinc finger protein zic 3

Phyre2
6 |
| c2ee8A_ |

### PDB 2ee8 chain A

Region: 211 - 326
Aligned: 103
Modelled: 116
Confidence: 99.1%
Identity: 16%
PDB header:gene regulation
Chain: A: PDB Molecule:protein odd-skipped-related 2;
PDBTitle: solution structure of three zf-c2h2 domains from mouse2 protein odd-skipped-related 2 splicing isoform 2

Phyre2
7 |
| c1wjpA_ |

### PDB 1wjp chain A

Region: 213 - 334
Aligned: 106
Modelled: 107
Confidence: 99.0%
Identity: 12%
PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein 295;
PDBTitle: solution structure of zf-c2h2 domains from human zinc2 finger protein 295

Phyre2
8 |
| c2rsiA_ |

### PDB 2rsi chain A

Region: 219 - 324
Aligned: 92
Modelled: 92
Confidence: 99.0%
Identity: 16%
PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein zfat;
PDBTitle: solution structures of the dna-binding domains of immune-related zinc-2 finger protein zfat

Phyre2
9 |
| c2dmdA_ |

### PDB 2dmd chain A

Region: 221 - 319
Aligned: 86
Modelled: 99
Confidence: 99.0%
Identity: 17%
PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 64, isoforms 1 and 2;
PDBTitle: solution structure of the n-terminal c2h2 type zinc-binding2 domain of the zinc finger protein 64, isoforms 1 and 2

Phyre2
10 |
| c2wbtA_ |

### PDB 2wbt chain A

Region: 70 - 321
Aligned: 119
Modelled: 120
Confidence: 99.0%
Identity: 17%
PDB header:dna-binding protein
Chain: A: PDB Molecule:b-129;
PDBTitle: the structure of a double c2h2 zinc finger protein from a2 hyperthermophilic archaeal virus in the absence of dna

Phyre2
11 |
| c2cshA_ |

### PDB 2csh chain A

Region: 218 - 319
Aligned: 88
Modelled: 102
Confidence: 98.9%
Identity: 17%
PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 297b;
PDBTitle: solution structure of tandem repeat of the zf-c2h2 domains2 of human zinc finger protein 297b

Phyre2
12 |
| c2kmkA_ |

### PDB 2kmk chain A

Region: 228 - 319
Aligned: 79
Modelled: 92
Confidence: 98.9%
Identity: 18%
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:zinc finger protein gfi-1;
PDBTitle: gfi-1 zinc fingers 3-5 complexed with dna

Phyre2
13 |
| c2rsjA_ |

### PDB 2rsj chain A

Region: 219 - 324
Aligned: 91
Modelled: 106
Confidence: 98.9%
Identity: 22%
PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein zfat;
PDBTitle: solution structures of the dna-binding domains of immune-related zinc-2 finger protein zfat

Phyre2
14 |
| c1g2dC_ |

### PDB 1g2d chain C

Region: 225 - 319
Aligned: 82
Modelled: 95
Confidence: 98.9%
Identity: 13%
PDB header:transcription/dna
Chain: C: PDB Molecule:tata box zinc finger protein;
PDBTitle: structure of a cys2his2 zinc finger/tata box complex (clone2 #2)

Phyre2
15 |
| c1x6hA_ |

### PDB 1x6h chain A

Region: 213 - 306
Aligned: 85
Modelled: 94
Confidence: 98.9%
Identity: 13%
PDB header:dna binding protein
Chain: A: PDB Molecule:transcriptional repressor ctcf;
PDBTitle: solution structures of the c2h2 type zinc finger domain of2 human transcriptional repressor ctcf

Phyre2
16 |
| c2ebtA_ |

### PDB 2ebt chain A

Region: 213 - 323
Aligned: 98
Modelled: 111
Confidence: 98.9%
Identity: 20%
PDB header:transcription
Chain: A: PDB Molecule:krueppel-like factor 5;
PDBTitle: solution structure of three tandem repeats of zf-c2h22 domains from human kruppel-like factor 5

Phyre2
17 |
| c2yt9A_ |

### PDB 2yt9 chain A

Region: 221 - 327
Aligned: 95
Modelled: 107
Confidence: 98.8%
Identity: 17%
PDB header:transcription
Chain: A: PDB Molecule:zinc finger-containing protein 1;
PDBTitle: solution structure of c2h2 type zinc finger domain 345 in2 zinc finger protein 278

Phyre2
18 |
| c2dlqA_ |

### PDB 2dlq chain A

Region: 221 - 327
Aligned: 106
Modelled: 107
Confidence: 98.8%
Identity: 20%
PDB header:transcription
Chain: A: PDB Molecule:gli-kruppel family member hkr3;
PDBTitle: solution structure of the tandem four zf-c2h2 domain2 repeats of murine gli-kruppel family member hkr3

Phyre2
19 |
| c2lv2A_ |

### PDB 2lv2 chain A

Region: 208 - 324
Aligned: 75
Modelled: 76
Confidence: 98.7%
Identity: 28%
PDB header:transcription
Chain: A: PDB Molecule:insulinoma-associated protein 1;
PDBTitle: solution nmr structure of c2h2-type zinc-fingers 4 and 5 from human2 insulinoma-associated protein 1 (fragment 424-497), northeast3 structural genomics consortium target hr7614b

Phyre2
20 |
| c2i13A_ |

### PDB 2i13 chain A

Region: 209 - 319
Aligned: 108
Modelled: 111
Confidence: 98.7%
Identity: 15%
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:aart;
PDBTitle: aart, a six finger zinc finger designed to recognize ann triplets

Phyre2
21 |
22 |
23 |
24 |
25 |
26 |
27 |
28 |
29 |
30 |
31 |
32 |
33 |
34 |
35 |
36 |
37 |
38 |
39 |
40 |
41 |
42 |
43 |
44 |
45 |
46 |
47 |
48 |
49 |
50 |
51 |
52 |
53 |
54 |
55 |
56 |
57 |
58 |
59 |
60 |
61 |
62 |
63 |
64 |
65 |
66 |
67 |
68 |
69 |
70 |
71 |
72 |
73 |
74 |
75 |
76 |
77 |
78 |
79 |
80 |
81 |
82 |
83 |
84 |
85 |
86 |
87 |
88 |
89 |
90 |
91 |
92 |
93 |
94 |
95 |
96 |
97 |
98 |
99 |
100 |
101 |
102 |
103 |
104 |
105 |
106 |
107 |
108 |
109 |
110 |
111 |
112 |
113 |
114 |
115 |
116 |
117 |
118 |
119 |
120 |
121 |
122 |
123 |
124 |
125 |
126 |
127 |
128 |
129 |
130 |
131 |
132 |
133 |
134 |
135 |
136 |
137 |
138 |
139 |
140 |
141 |
142 |
143 |
144 |
145 |
146 |
147 |
148 |
149 |
150 |
151 |
152 |
153 |
154 |
155 |
156 |
157 |
| c3k1qC_ |

### PDB 3k1q chain C

Region: 58 - 104
Aligned: 47
Modelled: 47
Confidence: 92.5%
Identity: 23%
PDB header:virus
Chain: C: PDB Molecule:vp3b, the building block protein of inner shell;
PDBTitle: backbone model of an aquareovirus virion by cryo-electron2 microscopy and bioinformatics

Phyre2
158 |
159 |
160 |
161 |
162 |
163 |
164 |
165 |
166 |
167 |
168 |
169 |
170 |
171 |
172 |
173 |
174 |
175 |
176 |
177 |
178 |
179 |
180 |
181 |
182 |
183 |
184 |
185 |
186 |
187 |
188 |
189 |
190 |
| d1x6fa1 |

### PDB 1x6f chain A domain 1

Region: 290 - 349
Aligned: 60
Modelled: 60
Confidence: 80.5%
Identity: 17%
Fold: beta-beta-alpha zinc fingers
Superfamily: beta-beta-alpha zinc fingers
Family: Classic zinc finger, C2H2

Phyre2
191 |
192 |
193 |
194 |
195 |
196 |
197 |
198 |
199 |
200 |
201 |
202 |
203 |
204 |
205 |
206 |
207 |
208 |
209 |
210 |
211 |
212 |
213 |
214 |
215 |
216 |
217 |
218 |
219 |
220 |
221 |
222 |
223 |
224 |
225 |
226 |
227 |
228 |
229 |
230 |
231 |
232 |
233 |
234 |
235 |
236 |
237 |
238 |
239 |
240 |
241 |
242 |
243 |

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c4ijdA_ |
|  | 99.6 | 9 | PDB header:transferase Chain: A: PDB Molecule:histone-lysine n-methyltransferase prdm9; PDBTitle: crystal structure of methyltransferase domain of human pr domain-2 containing protein 9
2 | c1tf6D_ |
|  | 99.5 | 12 | PDB header:transcription/dna Chain: D: PDB Molecule:protein (transcription factor iiia); PDBTitle: co-crystal structure of xenopus tfiiia zinc finger domain2 bound to the 5s ribosomal rna gene internal control region
3 | c2dmiA_ |
|  | 99.4 | 15 | PDB header:transcription Chain: A: PDB Molecule:teashirt homolog 3; PDBTitle: solution structure of the first and the second zf-c2h2 like2 domains of human teashirt homolog 3
4 | c1zu1A_ |
|  | 99.4 | 21 | PDB header:rna binding protein Chain: A: PDB Molecule:rna binding protein zfa; PDBTitle: solution structure of the n-terminal zinc fingers of the2 xenopus laevis double stranded rna binding protein zfa
5 | c2rpcA_ |
|  | 99.1 | 14 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein zic 3; PDBTitle: solution structure of the tandem zf-c2h2 domains from the2 human zinc finger protein zic 3
6 | c2ee8A_ |
|  | 99.1 | 16 | PDB header:gene regulation Chain: A: PDB Molecule:protein odd-skipped-related 2; PDBTitle: solution structure of three zf-c2h2 domains from mouse2 protein odd-skipped-related 2 splicing isoform 2
7 | c1wjpA_ |
|  | 99.0 | 12 | PDB header:metal binding protein Chain: A: PDB Molecule:zinc finger protein 295; PDBTitle: solution structure of zf-c2h2 domains from human zinc2 finger protein 295
8 | c2rsiA_ |
|  | 99.0 | 16 | PDB header:metal binding protein Chain: A: PDB Molecule:zinc finger protein zfat; PDBTitle: solution structures of the dna-binding domains of immune-related zinc-2 finger protein zfat
9 | c2dmdA_ |
|  | 99.0 | 17 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 64, isoforms 1 and 2; PDBTitle: solution structure of the n-terminal c2h2 type zinc-binding2 domain of the zinc finger protein 64, isoforms 1 and 2
10 | c2wbtA_ |
|  | 99.0 | 17 | PDB header:dna-binding protein Chain: A: PDB Molecule:b-129; PDBTitle: the structure of a double c2h2 zinc finger protein from a2 hyperthermophilic archaeal virus in the absence of dna
11 | c2cshA_ |
|  | 98.9 | 17 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 297b; PDBTitle: solution structure of tandem repeat of the zf-c2h2 domains2 of human zinc finger protein 297b
12 | c2kmkA_ |
|  | 98.9 | 18 | PDB header:dna binding protein/dna Chain: A: PDB Molecule:zinc finger protein gfi-1; PDBTitle: gfi-1 zinc fingers 3-5 complexed with dna
13 | c2rsjA_ |
|  | 98.9 | 22 | PDB header:metal binding protein Chain: A: PDB Molecule:zinc finger protein zfat; PDBTitle: solution structures of the dna-binding domains of immune-related zinc-2 finger protein zfat
14 | c1g2dC_ |
|  | 98.9 | 13 | PDB header:transcription/dna Chain: C: PDB Molecule:tata box zinc finger protein; PDBTitle: structure of a cys2his2 zinc finger/tata box complex (clone2 #2)
15 | c1x6hA_ |
|  | 98.9 | 13 | PDB header:dna binding protein Chain: A: PDB Molecule:transcriptional repressor ctcf; PDBTitle: solution structures of the c2h2 type zinc finger domain of2 human transcriptional repressor ctcf
16 | c2ebtA_ |
|  | 98.9 | 20 | PDB header:transcription Chain: A: PDB Molecule:krueppel-like factor 5; PDBTitle: solution structure of three tandem repeats of zf-c2h22 domains from human kruppel-like factor 5
17 | c2yt9A_ |
|  | 98.8 | 17 | PDB header:transcription Chain: A: PDB Molecule:zinc finger-containing protein 1; PDBTitle: solution structure of c2h2 type zinc finger domain 345 in2 zinc finger protein 278
18 | c2dlqA_ |
|  | 98.8 | 20 | PDB header:transcription Chain: A: PDB Molecule:gli-kruppel family member hkr3; PDBTitle: solution structure of the tandem four zf-c2h2 domain2 repeats of murine gli-kruppel family member hkr3
19 | c2lv2A_ |
|  | 98.7 | 28 | PDB header:transcription Chain: A: PDB Molecule:insulinoma-associated protein 1; PDBTitle: solution nmr structure of c2h2-type zinc-fingers 4 and 5 from human2 insulinoma-associated protein 1 (fragment 424-497), northeast3 structural genomics consortium target hr7614b
20 | c2i13A_ |
|  | 98.7 | 15 | PDB header:dna binding protein/dna Chain: A: PDB Molecule:aart; PDBTitle: aart, a six finger zinc finger designed to recognize ann triplets
21 | c4f6nA_ |
| not modelled | 98.6 | 11 | PDB header:dna binding protein/dna Chain: A: PDB Molecule:transcriptional regulator kaiso; PDBTitle: crystal structure of kaiso zinc finger dna binding protein in complex2 with methylated cpg site dna
22 | c1llmC_ |
| not modelled | 98.6 | 11 | PDB header:transcription/dna Chain: C: PDB Molecule:chimera of zif23-gcn4; PDBTitle: crystal structure of a zif23-gcn4 chimera bound to dna
23 | c2d9hA_ |
| not modelled | 98.6 | 22 | PDB header:dna binding protein Chain: A: PDB Molecule:zinc finger protein 692; PDBTitle: solution structure of the forth and fifth zf-c2h2 domains2 of zinc finger protein 692
24 | c1x5wA_ |
| not modelled | 98.6 | 20 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 64, isoforms 1; PDBTitle: solution structure of the c2h2 type zinc-binding domain of2 human zinc finger protein 64, isoforms 1 and 2
25 | c2dlkA_ |
| not modelled | 98.6 | 14 | PDB header:dna binding protein Chain: A: PDB Molecule:novel protein; PDBTitle: solution structure of the first and the second zf-c2h22 domains of zinc finger protein 692
26 | c4gznC_ |
| not modelled | 98.6 | 24 | PDB header:transcription/dna Chain: C: PDB Molecule:zinc finger protein 57; PDBTitle: mouse zfp57 zinc fingers in complex with methylated dna
27 | c2adrA_ |
| not modelled | 98.5 | 22 | PDB header:transcription regulation Chain: A: PDB Molecule:adr1; PDBTitle: adr1 dna-binding domain from saccharomyces cerevisiae, nmr,2 25 structures
28 | c2cotA_ |
| not modelled | 98.5 | 17 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 435; PDBTitle: solution structure of the first and second zf-c2h2 domain2 of zinc finger protein 435
29 | c1x6eA_ |
| not modelled | 98.5 | 24 | PDB header:dna binding protein Chain: A: PDB Molecule:zinc finger protein 24; PDBTitle: solution structures of the c2h2 type zinc finger domain of2 human zinc finger protein 24
30 | c1bboA_ |
| not modelled | 98.5 | 29 | PDB header:dna-binding protein Chain: A: PDB Molecule:human enhancer-binding protein mbp-1; PDBTitle: high-resolution solution structure of the double cys2*his22 zinc finger from the human enhancer binding protein mbp-1
31 | c2drpD_ |
| not modelled | 98.5 | 18 | PDB header:transcription/dna Chain: D: PDB Molecule:protein (tramtrack dna-binding domain); PDBTitle: the crystal structure of a two zinc-finger peptide reveals2 an extension to the rules for zinc-finger/dna recognition
32 | c1tf3A_ |
| not modelled | 98.5 | 18 | PDB header:transcription/dna Chain: A: PDB Molecule:transcription factor iiia; PDBTitle: tfiiia finger 1-3 bound to dna, nmr, 22 structures
33 | c2ej4A_ |
| not modelled | 98.5 | 12 | PDB header:gene regulation Chain: A: PDB Molecule:zinc finger protein zic 3; PDBTitle: functional and structural basis of nuclear localization2 signal in zic3 zinc finger domain: a role of conserved3 tryptophan residue in the zinc finger domain
34 | c2ctdA_ |
| not modelled | 98.5 | 19 | PDB header:metal binding protein Chain: A: PDB Molecule:zinc finger protein 512; PDBTitle: solution structure of two zf-c2h2 domains from human zinc2 finger protein 512
35 | d1zu1a2 |
| not modelled | 98.4 | 30 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:HkH motif-containing C2H2 finger
36 | d2csha1 |
| not modelled | 98.4 | 23 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
37 | c2ct1A_ |
| not modelled | 98.4 | 19 | PDB header:transcription Chain: A: PDB Molecule:transcriptional repressor ctcf; PDBTitle: solution structure of the zinc finger domain of2 transcriptional repressor ctcf protein
38 | c2lceA_ |
| not modelled | 98.3 | 11 | PDB header:transcription regulator Chain: A: PDB Molecule:b-cell lymphoma 6 protein; PDBTitle: chemical shift assignment of hr4436b from homo sapiens, northeast2 structural genomics consortium
39 | c2prtA_ |
| not modelled | 98.3 | 17 | PDB header:transcription/dna Chain: A: PDB Molecule:wilms tumor 1; PDBTitle: structure of the wilms tumor suppressor protein zinc finger2 domain bound to dna
40 | c3uk3D_ |
| not modelled | 98.2 | 25 | PDB header:dna/metal binding protein Chain: D: PDB Molecule:zinc finger protein 217; PDBTitle: crystal structure of znf217 bound to dna
41 | c1un6D_ |
| not modelled | 98.2 | 12 | PDB header:rna-binding protein/rna Chain: D: PDB Molecule:transcription factor iiia; PDBTitle: the crystal structure of a zinc finger - rna complex2 reveals two modes of molecular recognition
42 | c2epsA_ |
| not modelled | 98.2 | 21 | PDB header:transcription Chain: A: PDB Molecule:poz-, at hook-, and zinc finger-containing PDBTitle: solution structure of the 4th zinc finger domain of zinc2 finger protein 278
43 | c2gqjA_ |
| not modelled | 98.2 | 20 | PDB header:gene regulation Chain: A: PDB Molecule:zinc finger protein kiaa1196; PDBTitle: solution structure of the two zf-c2h2 like domains(493-575)2 of human zinc finger protein kiaa1196
44 | c1ubdC_ |
| not modelled | 98.1 | 13 | PDB header:transcription/dna Chain: C: PDB Molecule:protein (yy1 zinc finger domain); PDBTitle: co-crystal structure of human yy1 zinc finger domain bound2 to the adeno-associated virus p5 initiator element
45 | c2epaA_ |
| not modelled | 98.1 | 26 | PDB header:transcription Chain: A: PDB Molecule:krueppel-like factor 10; PDBTitle: solution structure of the first and second zf-c2h2 domains2 from human krueppel-like factor 10
46 | c2eprA_ |
| not modelled | 98.1 | 17 | PDB header:transcription Chain: A: PDB Molecule:poz-, at hook-, and zinc finger-containing PDBTitle: solution structure of the secound zinc finger domain of2 zinc finger protein 278
47 | c2gliA_ |
| not modelled | 98.1 | 14 | PDB header:transcription/dna Chain: A: PDB Molecule:protein (five-finger gli); PDBTitle: five-finger gli/dna complex
48 | c1f2iI_ |
| not modelled | 98.1 | 11 | PDB header:transcription/dna Chain: I: PDB Molecule:fusion of n-terminal 17-mer peptide extension to PDBTitle: cocrystal structure of selected zinc finger dimer bound to2 dna
49 | d1zr9a1 |
| not modelled | 98.0 | 18 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:HkH motif-containing C2H2 finger
50 | c1zr9A_ |
| not modelled | 98.0 | 18 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 593; PDBTitle: solution structure of a human c2h2-type zinc finger protein
51 | c2emcA_ |
| not modelled | 97.9 | 18 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 473; PDBTitle: solution structure of the c2h2 type zinc finger (region 641-2 673) of human zinc finger protein 473
52 | c2eomA_ |
| not modelled | 97.9 | 16 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 95 homolog; PDBTitle: solution structure of the c2h2 type zinc finger (region 341-2 373) of human zinc finger protein 95 homolog
53 | c2yttA_ |
| not modelled | 97.9 | 14 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 473; PDBTitle: solution structure of the c2h2 type zinc finger (region 204-2 236) of human zinc finger protein 473
54 | c2epwA_ |
| not modelled | 97.9 | 17 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 268; PDBTitle: solution structure of the 24th c2h2 type zinc finger domain2 of zinc finger protein 268
55 | c2eohA_ |
| not modelled | 97.8 | 19 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 28 homolog; PDBTitle: solution structure of the c2h2 type zinc finger (region 780-2 812) of human zinc finger protein 28 homolog
56 | d2epra1 |
| not modelled | 97.8 | 18 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
57 | c2ghfA_ |
| not modelled | 97.8 | 8 | PDB header:transcription, metal binding protein Chain: A: PDB Molecule:zinc fingers and homeoboxes protein 1; PDBTitle: solution structure of the complete zinc-finger region of2 human zinc-fingers and homeoboxes 1 (zhx1)
58 | c2em5A_ |
| not modelled | 97.8 | 14 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 95 homolog; PDBTitle: solution structure of the c2h2 type zinc finger (region 768-2 800) of human zinc finger protein 95 homolog
59 | d1p7aa_ |
| not modelled | 97.8 | 18 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
60 | c2ytjA_ |
| not modelled | 97.8 | 15 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 484; PDBTitle: solution structure of the c2h2 type zinc finger (region 771-2 803) of human zinc finger protein 484
61 | c2emwA_ |
| not modelled | 97.8 | 18 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 268; PDBTitle: solution structure of the c2h2 type zinc finger (region 301-2 331) of human zinc finger protein 268
62 | c2epzA_ |
| not modelled | 97.8 | 13 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 28 homolog; PDBTitle: solution structure of the 4th c2h2 type zinc finger domain2 of zinc finger protein 28 homolog
63 | c2en6A_ |
| not modelled | 97.7 | 18 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 268; PDBTitle: solution structure of the c2h2 type zinc finger (region 887-2 919) of human zinc finger protein 268
64 | c2emlA_ |
| not modelled | 97.7 | 13 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 28 homolog; PDBTitle: solution structure of the c2h2 type zinc finger (region 752-2 784) of human zinc finger protein 28 homolog
65 | d2cota2 |
| not modelled | 97.7 | 17 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
66 | c2ythA_ |
| not modelled | 97.7 | 15 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 224; PDBTitle: solution structure of the c2h2 type zinc finger (region 479-2 511) of human zinc finger protein 224
67 | c2em4A_ |
| not modelled | 97.6 | 14 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 28 homolog; PDBTitle: solution structure of the c2h2 type zinc finger (region 724-2 756) of human zinc finger protein 28 homolog
68 | c2elzA_ |
| not modelled | 97.6 | 14 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 224; PDBTitle: solution structure of the 17th zf-c2h2 domain from human2 zinc finger protein 224
69 | d2ct1a2 |
| not modelled | 97.6 | 17 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
70 | d1x6ha2 |
| not modelled | 97.6 | 14 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
71 | c2epuA_ |
| not modelled | 97.6 | 14 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 32; PDBTitle: solution structure of the secound c2h2 type zinc finger2 domain of zinc finger protein 32
72 | c2en2A_ |
| not modelled | 97.6 | 20 | PDB header:transcription Chain: A: PDB Molecule:b-cell lymphoma 6 protein; PDBTitle: solution structure of the c2h2 type zinc finger (region 598-2 626) of human b-cell lymphoma 6 protein
73 | c2yu5A_ |
| not modelled | 97.6 | 23 | PDB header:rna binding protein Chain: A: PDB Molecule:zinc finger protein 473; PDBTitle: solution structure of the zf-c2h2 domain (669-699aa) in2 zinc finger protein 473
74 | d1xf7a_ |
| not modelled | 97.6 | 17 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
75 | c1xf7A_ |
| not modelled | 97.6 | 17 | PDB header:transcription Chain: A: PDB Molecule:wilms' tumor protein; PDBTitle: high resolution nmr structure of the wilms' tumor2 suppressor protein (wt1) finger 3
76 | c2eq4A_ |
| not modelled | 97.6 | 17 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 224; PDBTitle: solution structure of the 11th c2h2 type zinc finger domain2 of zinc finger protein 224
77 | d1srka_ |
| not modelled | 97.6 | 24 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
78 | c2ytbA_ |
| not modelled | 97.6 | 15 | PDB header:metal binding protein Chain: A: PDB Molecule:zinc finger protein 32; PDBTitle: solution structure of c2h2 type zinc finger domain 5 in2 zinc finger protein 32
79 | c2epqA_ |
| not modelled | 97.6 | 21 | PDB header:transcription Chain: A: PDB Molecule:poz-, at hook-, and zinc finger-containing PDBTitle: solution structure of the third zinc finger domain of zinc2 finger protein 278
80 | c2entA_ |
| not modelled | 97.6 | 17 | PDB header:transcription Chain: A: PDB Molecule:krueppel-like factor 15; PDBTitle: solution structure of the second c2h2-type zinc finger2 domain from human krueppel-like factor 15
81 | c2ytaA_ |
| not modelled | 97.6 | 15 | PDB header:metal binding protein Chain: A: PDB Molecule:zinc finger protein 32; PDBTitle: solution structure of c2h2 type zinc finger domain 3 in2 zinc finger protein 32
82 | c2emzA_ |
| not modelled | 97.5 | 24 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 95 homolog; PDBTitle: solution structure of the c2h2 type zinc finger (region 628-2 660) of human zinc finger protein 95 homolog
83 | c2em3A_ |
| not modelled | 97.5 | 17 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 28 homolog; PDBTitle: solution structure of the c2h2 type zinc finger (region 640-2 672) of human zinc finger protein 28 homolog
84 | c2ytmA_ |
| not modelled | 97.5 | 17 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 28 homolog; PDBTitle: solution structure of the c2h2 type zinc finger (region 696-2 728) of human zinc finger protein 28 homolog
85 | c2eoqA_ |
| not modelled | 97.5 | 23 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 224; PDBTitle: solution structure of the c2h2 type zinc finger (region 283-2 315) of human zinc finger protein 224
86 | c2eooA_ |
| not modelled | 97.5 | 22 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 95 homolog; PDBTitle: solution structure of the c2h2 type zinc finger (region 425-2 457) of human zinc finger protein 95 homolog
87 | c2epcA_ |
| not modelled | 97.5 | 13 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 32; PDBTitle: solution structure of zinc finger domain 7 in zinc finger2 protein 32
88 | c2em0A_ |
| not modelled | 97.5 | 18 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 224; PDBTitle: solution structure of the 18th zf-c2h2 domain from human2 zinc finger protein 224
89 | d2epsa1 |
| not modelled | 97.5 | 24 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
90 | c2eoxA_ |
| not modelled | 97.5 | 18 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 473; PDBTitle: solution structure of the c2h2 type zinc finger (region 315-2 345) of human zinc finger protein 473
91 | c2eozA_ |
| not modelled | 97.5 | 21 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 473; PDBTitle: solution structure of the c2h2 type zinc finger (region 809-2 841) of human zinc finger protein 473
92 | c2el5A_ |
| not modelled | 97.5 | 19 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 268; PDBTitle: solution structure of the 18th zf-c2h2 domain from human2 zinc finger protein 268
93 | c2ysvA_ |
| not modelled | 97.5 | 14 | PDB header:metal binding protein Chain: A: PDB Molecule:zinc finger protein 473; PDBTitle: solution structure of c2h2 type zinc finger domain 17 in2 zinc finger protein 473
94 | c2eovA_ |
| not modelled | 97.5 | 19 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 484; PDBTitle: solution structure of the c2h2 type zinc finger (region 519-2 551) of human zinc finger protein 484
95 | c1areA_ |
| not modelled | 97.4 | 21 | PDB header:transcription regulation Chain: A: PDB Molecule:yeast transcription factor adr1; PDBTitle: structures of dna-binding mutant zinc finger domains:2 implications for dna binding
96 | c1arfA_ |
| not modelled | 97.4 | 21 | PDB header:transcription regulation Chain: A: PDB Molecule:yeast transcription factor adr1; PDBTitle: structures of dna-binding mutant zinc finger domains:2 implications for dna binding
97 | c2lvrA_ |
| not modelled | 97.4 | 17 | PDB header:transcription Chain: A: PDB Molecule:zinc finger and btb domain-containing protein 17; PDBTitle: solution structure of miz-1 zinc finger 8
98 | c2eltA_ |
| not modelled | 97.4 | 13 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 406; PDBTitle: solution structure of the 3rd c2h2 zinc finger of human2 zinc finger protein 406
99 | c2elsA_ |
| not modelled | 97.4 | 20 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 406; PDBTitle: solution structure of the 2nd c2h2 zinc finger of human2 zinc finger protein 406
100 | d1zu1a1 |
| not modelled | 97.4 | 31 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:HkH motif-containing C2H2 finger
101 | c1meyG_ |
| not modelled | 97.4 | 18 | PDB header:transferase/dna Chain: G: PDB Molecule:consensus zinc finger; PDBTitle: crystal structure of a designed zinc finger protein bound2 to dna
102 | c2en3A_ |
| not modelled | 97.4 | 15 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 95 homolog; PDBTitle: solution structure of the c2h2 type zinc finger (region 796-2 828) of human zinc finger protein 95 homolog
103 | d2adra1 |
| not modelled | 97.4 | 21 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
104 | c2lvtA_ |
| not modelled | 97.3 | 24 | PDB header:transcription Chain: A: PDB Molecule:zinc finger and btb domain-containing protein 17; PDBTitle: solution structure of miz-1 zinc finger 9
105 | c1ardA_ |
| not modelled | 97.3 | 21 | PDB header:transcription regulation Chain: A: PDB Molecule:yeast transcription factor adr1; PDBTitle: structures of dna-binding mutant zinc finger domains:2 implications for dna binding
106 | d1sp1a_ |
| not modelled | 97.3 | 24 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
107 | c1sp1A_ |
| not modelled | 97.3 | 24 | PDB header:zinc finger Chain: A: PDB Molecule:sp1f3; PDBTitle: nmr structure of a zinc finger domain from transcription2 factor sp1f3, minimized average structure
108 | c2en8A_ |
| not modelled | 97.3 | 17 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 224; PDBTitle: solution structure of the c2h2 type zinc finger (region 171-2 203) of human zinc finger protein 224
109 | c1va3A_ |
| not modelled | 97.3 | 24 | PDB header:transcription Chain: A: PDB Molecule:transcription factor sp1; PDBTitle: solution structure of transcription factor sp1 dna binding2 domain (zinc finger 3)
110 | c2elqA_ |
| not modelled | 97.3 | 21 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 406; PDBTitle: solution structure of the 14th c2h2 zinc finger of human2 zinc finger protein 406
111 | c1rikA_ |
| not modelled | 97.3 | 22 | PDB header:de novo protein Chain: A: PDB Molecule:e6apc1 peptide; PDBTitle: e6-binding zinc finger (e6apc1)
112 | c2m0fA_ |
| not modelled | 97.3 | 18 | PDB header:transcription Chain: A: PDB Molecule:zinc finger and btb domain-containing protein 17; PDBTitle: solution structure of miz-1 zinc finger 7
113 | c2yteA_ |
| not modelled | 97.2 | 22 | PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 473; PDBTitle: solution structure of the c2h2 type zinc finger (region 484-2 512) of human zinc finger protein 473
114 | d4znfa_ |
| not modelled | 97.2 | 30 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
115 | c4znfA_ |
| not modelled | 97.2 | 30 | PDB header:zinc finger dna binding domain Chain: A: PDB Molecule:zinc finger; PDBTitle: high-resolution three-dimensional structure of a single2 zinc finger from a human enhancer binding protein in3 solution
116 | c3znfA_ |
| not modelled | 97.2 | 30 | PDB header:zinc finger dna binding domain Chain: A: PDB Molecule:zinc finger; PDBTitle: high-resolution three-dimensional structure of a single2 zinc finger from a human enhancer binding protein in3 solution
117 | d1u85a1 |
| not modelled | 97.2 | 21 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
118 | d2dlka2 |
| not modelled | 97.2 | 29 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
119 | d2cota1 |
| not modelled | 97.2 | 19 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
120 | d1x6ea1 |
| not modelled | 97.1 | 16 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite