Phyre 2 alignment of A2A5E6 with c2ghfA_

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Job Description | A2A5E6
Confidence | 97.82% | Date | Wed Jul 10 14:22:42 BST 2013
Rank | 57 | Aligned Residues | 85
% Identity | 8% | Template | c2ghfA_
PDB info | PDB header:transcription, metal binding protein | Chain: A: PDB Molecule:zinc fingers and homeoboxes protein 1; | PDBTitle: solution structure of the complete zinc-finger region of2 human zinc-fingers and homeoboxes 1 (zhx1)
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | G | V | N | G | E | G | R | G | E | K | G | R | L | Y | C | P | T | C | K | V | T | V | N | S | A | S | Q | L | Q | A | H | N | T | G | A | K | H | R | W | M | V | E | G | H | Q | G | A | P | R | R | G | R | G | R | P | V | S | R | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | H | H | H | N | Q | Q | N | K | K | V | E | G | G | Y | E | C | K | Y | C | T | F | Q | T | P | D | L | N | M | F | T | F | H | V | D | S | . | . | . | . | . | . | . | . | . | E | H | P | N | V | V | L | N | S | S | Y | V | C | V | E | C
Template Known Secondary structure |  | T | T | T | T | T | T |  |  |  |  |  | S | S |  |  |  | S | S |  | S |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  | S | S |  |  |  | S |  |  |  |  |  | T | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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