Phyre 2 alignment of A2A5E6 with c4jcjB_

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Job Description | A2A5E6
Confidence | 51.08% | Date | Wed Jul 10 14:22:42 BST 2013
Rank | 217 | Aligned Residues | 45
% Identity | 9% | Template | c4jcjB_
PDB info | PDB header:protein binding | Chain: B: PDB Molecule:fusion protein insulin gene enhancer protein isl-1, lim | PDBTitle: crystal structure of isl1 lim domains with ldb1 lim-interaction domain
Resolution | 3.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 271 | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | S | R | G | G | T | G | H | K | T | K | R | V | I | G | N | R | G | G | R | Q | G | P | S | P | P | F | H | C | A | L | C | Q | L | H | V | N | S | E | T | Q | L | K | Q | H
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | C | V | G | C | G | N | Q | I | H | D | Q | Y | I | L | R | V | S | P | D | L | E | W | H | A | A | C | L | K | C | A | E | C | N | Q | Y | L | D | E | S | C | T | C | F | V | R
Template Known Secondary structure |  |  | T | T | T |  | S | B |  |  | S | S |  |  |  |  |  | T | T | T |  |  |  |  | G | G | G |  | B |  | T | T | T |  |  | B | S | T | T | S | S |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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