Phyre 2 alignment of A2A5E6 with c3splC_

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Job Description | A2A5E6
Confidence | 58.26% | Date | Wed Jul 10 14:22:42 BST 2013
Rank | 209 | Aligned Residues | 26
% Identity | 19% | Template | c3splC_
PDB info | PDB header:hydrolase/dna | Chain: C: PDB Molecule:aprataxin-like protein; | PDBTitle: crystal structure of aprataxin ortholog hnt3 in complex with dna and2 amp
Resolution | 2.10 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 74 | . | . | . | . | . | 80 | . | . | . | . | . | . |  | . | . | . | 90 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | L | F | I | S | C | N | I | C | H | L | R | F | . | N | S | A | N | Q | A | E | A | H | Y | K | G | H
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Q | E | D | L | K | C | W | R | C | G | E | T | F | G | R | H | F | T | K | L | K | A | H | L | Q | E | E
Template Known Secondary structure |  | G | S |  |  | B |  | T | T | T |  |  | B |  | T | T |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 195 | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | .

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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