Phyre 2 alignment of A2A5E6 with c2yrcA_

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Job Description | A2A5E6
Confidence | 26.07% | Date | Wed Jul 10 14:22:42 BST 2013
Rank | 241 | Aligned Residues | 25
% Identity | 28% | Template | c2yrcA_
PDB info | PDB header:protein transport | Chain: A: PDB Molecule:protein transport protein sec23a; | PDBTitle: solution structure of the zf-sec23_sec24 from human sec23a
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 58 | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | A | V | I | S | H | T | F | G | V | P | S | P | L | K | K | K | L | F | I | S | C | N | I | C | H | L | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | A | V | L | N | P | L | C | Q | V | . | . | . | D | Y | R | A | K | L | W | A | C | N | F | C | Y | Q | R
Template Known Secondary structure |  |  |  | B |  |  | T | T | S |  |  | . | . | . |  | G | G | G | T |  |  |  |  | S | S | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 67 | . | . | 70 | . | . | . | . | . | . |  |  |  | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | .

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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