Return to main results Retrieve Phyre Job Id

Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank106Aligned Residues252
% Identity38%Templatec4hzsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:activated cdc42 kinase 1; PDBTitle: crystal structure of ack1 kinase domain with c-terminal sh3 domain
Resolution3.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   359360.........370.........380......... 390........ .400.........410......
Predicted Secondary structure 











.
.



Query SS confidence 






























.








.

















Query Sequence  LDRSLLTLEDNELGSGNFGTVKKGYYQMKKV. VKTVAVKIL. KNEANDPALKDELLAEAN
Query Conservation              

 
 

 
          .   



 
.               
  
Alig confidence 






























.








.

















Template Conservation 

    
     

 
 

 

             



 
                
  
Template Sequence  LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVN
Template Known Secondary structure  B

GGG



B

TTS
TTS


S



S
Template Predicted Secondary structure 

















Template SS confidence 



























































   120.........130.........140.........150.........160.........170.........
 
   417..420.........430.........440.........450.... .....460.........470.....
Predicted Secondary structure 













.




Query SS confidence 





































.




















Query Sequence  VMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYL. QQNRHIKDKNIIELVHQVSMG
Query Conservation 

  
 
  

   
        

 
    


   
.                

  
Alig confidence 





































.




















Template Conservation   
  
 




             
      
 
                          
Template Sequence  AMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG
Template Known Secondary structure  T


TTB


SSS



SS
BSTT
S
Template Predicted Secondary structure 









































Template SS confidence 



























































   180.........190.........200.........210.........220.........230.........
 
   476...480.........490.........500.........510.........520.........530.....
Predicted Secondary structure 



































Query SS confidence 



























































Query Sequence  MKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP
Query Conservation 
 


   






  



      

 




                  
    

Alig confidence 





































.............








Template Conservation                                        .............         
Template Sequence  MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL. . . . . . . . . . . . . PVPFAWCAP
Template Known Secondary structure  TT


S

SGGGSSSS


TT
.............


GGG

Template Predicted Secondary structure 

































.............








Template SS confidence 



























































   240.........250.........260.........270....... ..280......
 
   536...540.........550.........560.........570.........580. ........590....
Predicted Secondary structure 















.










Query SS confidence 













































.












Query Sequence  ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK. GERMGCPAGCPRE
Query Conservation 
          




 

 
 
  
 
  
            
  .      
   
  
Alig confidence 













































.












Template Conservation             














 
  

           
                
Template Sequence  ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD
Template Known Secondary structure 



TTT

TTTT

TS






TTS
Template Predicted Secondary structure 






























Template SS confidence 



























































   300.........310.........320.........330.........340.........350.........
 
   595....600.........610.........620...
Predicted Secondary structure 






Query SS confidence 




























Query Sequence  MYDLMNLCWTYDVENRPGFTAVELRLRNY
Query Conservation     
   
    
  


   
   
   
Alig confidence 




























Template Conservation 
  

   
   
  


   

  
   
Template Sequence  IYNVMVQCWAHKPEDRPTFVALRDFLLEA
Template Known Secondary structure  T
SSGGGS

T
Template Predicted Secondary structure 







Template SS confidence 




























   360.........370.........380........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D