Return to main results Retrieve Phyre Job Id

Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank264Aligned Residues250
% Identity20%Templatec4b99A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase 7; PDBTitle: crystal structure of mapk7 (erk5) with inhibitor
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   365....370.........380.........390.........400.........410.........420....
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Query Sequence  TLEDNELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP
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Template Sequence  YEIIETIGNGAYGVVSSARRRLTGQQ. . VAIKKIPNAFDVVTNAKRTLRELKILKHFKHD
Template Known Secondary structure 
SS
TTT

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   55....60.........70.........80 .........90.........100.........110..
 
   425....430...... ...440.........450.........460.........470.......
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Query Sequence  YIVRMIGICEAE. . . . . . . SWMLVMEMAELGPLNKYLQQNRHIKDKNIIELVHQVSMGMK
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Template Sequence  NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQI. IHSSQPLTLEHVRYFLYQLLRGLK
Template Known Secondary structure  TB




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   113......120.........130.........140....... ..150.........160.........170.
 
   478.480.........490.........500.........510.........520.........530.......
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Query Sequence  YLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC
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Template Sequence  YMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLQYFMTEYVATRW. . . . . YRAPELM
Template Known Secondary structure  TT
B




GGG
TT




TT
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T.....T

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   172.......180.........190.........200.........210......... 220......
 
   538.540.........550.........560.........570.........580.........
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Query Sequence  INYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA. . . . . . . .
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Template Sequence  LSLHEYTQAIDLWSVGCIFGEMLA. RRQLFPGKNYVHQLQLIMMVLGTPSPAVIQRVRAY
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S


T.TS
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   234.....240.........250....... ..260.........270.........280.........290..
 
   590.........600.........610.........620......
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Query Sequence  . . . . . . . . . . . . . . . . . GCPREMYDLMNLCWTYDVENRPGFTAVELRLRNYYYD
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Template Sequence  IQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAA. . . LRHPFLA
Template Known Secondary structure  SS






STT

S
SSTTTS

...TTSGGGT
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   298.300.........310.........320.........330.........340. .......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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