 |
| Job Description | P48025 | | Confidence | 77.27% | Date | Wed Jul 10 14:17:05 BST 2013 |
| Rank | 464 | Aligned Residues | 91 |
| % Identity | 8% | Template | c4annA_ |
| PDB info |
PDB header:membrane protein | Chain: A: PDB Molecule:essb; |
PDBTitle: crystal structure staphylococcus aureus essb cytoplasmic fragment
|
| Resolution | 1.05 Å |
|
 |
|   |   |
422 | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . |
| Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
D | N | P | Y | I | V | R | M | I | G | I | C | E | A | E | S | W | M | L | V | M | E | M | A | E | L | G | P | L | N | K | Y | L | Q | Q | N | R | H | I | K | D | K | N | I | I | E | L | V | H | Q | V | S | M | G | M | K | Y | L | E | E |
| Query Conservation |   |
  |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |
|   |   |   |   | . |
|   |
|   |
|
| . |   |   |   |
|   |
|   |   |   |   |   |   |   |
|
| . |   |   |
|   |
|   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |
| Template Sequence |   |
H | S | P | Y | F | I | D | A | E | . |
L | T | E | L | R | D | . |
S | F | Q | I | H | Y | D | I | N | D | N | H | T | P | F | . |
D | N | I | K | S | F | T | K | N | E | K | L | R | Y | L | L | N | I | K | N | L | E | E | V | N | R | T |
| Template Known Secondary structure |   |
|
| T | T | B |
|
|  |  | . |  |  |  |
| S | S | . |  |  |  |  |  |  |
|
|
| T | T | S |  |  | G | . | G | G | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  | G | G | G | G | G | G | G | G | G | S |
| Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  | . |  |  |  |  |
|
| . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  | . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
54 | . | . | . | . | . | 60 | . | . | |
. | . | . | . | . | . | |
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
. | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
|   |
|   |   |
482 | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | N | F | V | H | R | D | L | A | A | R | N | V | L | L | V | T | Q | H | Y | A | K | I | S | D | F | G | L | S | K | A | L | R | A | D | E |
| Query Conservation |   |
  |   |
|
|
|
|
|
|
|   |   |
|
|
|
|   |   |   |   |   |   |
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |
| Alig confidence |   |
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  | . | . |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |
|
|
|   |   |
| Template Sequence |   |
R | . |
. |
Y | T | F | V | L | A | P | D | E | L | F | F | T | R | D | G | L | P | I | A | K | T | R | G | L | Q | N | V | V | D | P | L | P |
| Template Known Secondary structure |   |
S | . | . |  |  |
|
|
| S | G | G | G |  |  |  |
| T | T | S |
|  |  |  | S |
|
|  |  | T | T | T | B | S |
|
|
|
| Template Predicted Secondary structure |   |
| . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
111 | |
|
. | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|