Job Description P48025 Confidence 100.00% Date Wed Jul 10 14:17:05 BST 2013 Rank 262 Aligned Residues 241 % Identity 22% Template c4aguC_ PDB info PDB header:transferase Chain: C: PDB Molecule:cyclin-dependent kinase-like 1; PDBTitle: crystal structure of the human cdkl1 kinase domain Resolution 2.40 Å

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		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	E	D	N	E	L	G	S	G	N	F	G	T	V	K	K	G	Y	Y	Q	M	K	K	V	V	K	T	V	A	V	K	I	L	K	N	E	A	N	D	P	A	L	K	D	E	L	L	A	E	A	N	V	M	Q	Q	L	D	N	P
Query Conservation
Alig confidence																												.	.
Template Conservation																												.	.
Template Sequence		Y	E	K	I	G	K	I	G	E	G	S	Y	G	V	V	F	K	C	R	N	R	D	T	G	Q	I	.	.	V	A	I	K	K	F	L	E	S	E	D	D	P	V	I	K	K	I	A	L	R	E	I	R	M	L	K	Q	L	K	H	P
Template Known Secondary structure												S	S									T	T	T				.	.										S	S																					T
Template Predicted Secondary structure																												.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		425	.	.	.	.	430	.	.	.		.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		Y	I	V	R	M	I	G	I	C	.	E	A	E	S	W	M	L	V	M	E	M	A	E	L	G	P	L	N	K	Y	L	Q	Q	N	R	H	I	K	D	K	N	I	I	E	L	V	H	Q	V	S	M	G	M	K	Y	L	E	E	S	N
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		N	L	V	N	L	L	E	V	F	R	R	K	R	R	L	H	L	V	F	E	Y	C	D	H	T	V	L	H	E	L	D	R	Y	Q	R	G	V	P	E	H	L	V	K	S	I	T	W	Q	T	L	Q	A	V	N	F	C	H	K	H	N
Template Known Secondary structure		T	B										T	T										S										T	S	S																								T	T
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.		540	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		F	V	H	R	D	L	A	A	R	N	V	L	L	V	T	Q	H	Y	A	K	I	S	D	F	G	L	S	K	A	L	R	A	D	E	N	Y	Y	K	A	Q	T	H	G	K	W	P	V	K	W	Y	A	P	E	C	I	N	.	Y	Y	K
Query Conservation																																																										.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	I	H	R	D	V	K	P	E	N	I	L	I	T	K	H	S	V	I	K	L	C	D	F	G	F	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	T	R	W	Y	R	S	P	E	L	L	V	G	D	T	Q
Template Known Secondary structure								S	G	G	G					T	T	S								T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				G	G	G							T	T		S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.																150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		543	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	A	F	S	Y	G	Q	K	P	Y	R	G	M	K	G	S	E	V	T	A	M	L	E	K	G	E	R	M	G	C	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.
Template Sequence		Y	G	P	P	V	D	V	W	A	I	G	C	V	F	A	E	L	L	S	.	G	V	P	L	W	P	G	K	S	D	V	D	Q	L	Y	L	I	R	K	T	L	G	D	L	I	P	R	H	Q	Q	V	F	S	T	N	Q	Y	F	S	G
Template Known Secondary structure				T																	.	S	S		S				S	S														S											T		G	G	G	T	T
Template Predicted Secondary structure																					.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
																			590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	P	R	E	M	Y	D	L	M	N	L	C	W	T	Y	D	V	E	N	R	P	G	F	T	A	V	E	L	R	L	R	N	Y	Y	Y	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation																																														.	.	.
Template Sequence		V	K	I	P	D	P	E	D	M	E	P	L	E	L	K	F	P	N	I	S	Y	P	A	L	G	L	L	K	G	C	L	H	M	D	P	T	E	R	L	T	C	E	Q	L	.	.	.	L	H	H	P	Y	F	E
Template Known Secondary structure								S	S									T	T	S														S	S	T	T	T	S							.	.	.	T	T	S	G	G	G	T
Template Predicted Secondary structure																																														.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.				.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D