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Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank271Aligned Residues247
% Identity21%Templatec4accB_
PDB info PDB header:transferaseChain: B: PDB Molecule:glycogen synthase kinase-3 beta; PDBTitle: gsk3b in complex with inhibitor
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   365....370.........380.........390.........400.........410.........420....
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Query Sequence  TLEDNELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP
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Template Sequence  YTDTKVIGNGSFGVVYQAKLCDSGEL. . VAIKKVLQDKRF. . . . . . KNRELQIMRKLDHC
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T


T
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   56...60.........70.........80. ........90... ......100.......
 
   425....430.... .....440.........450.... .....460.........470....
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Query Sequence  YIVRMIGICE. . . . . . . AESWMLVMEMAELGPLNKYL. . . QQNRHIKDKNIIELVHQVSM
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Template Sequence  NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR
Template Known Secondary structure  TB



SSTT




TT



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   108.110.........120.........130.........140.........150.........160.......
 
   475....480.........490...... ...500.........510.........520.........530...
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Query Sequence  GMKYLEESNFVHRDLAARNVLL. VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY
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Template Sequence  SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY. . . RA
Template Known Secondary structure  TTT
S

SGGG
TTT




SS


TT



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   168.170.........180.........190.........200.........210.........220.. ..
 
   534.....540.........550.........560.........570.........580.......
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Query Sequence  APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC. . . . . .
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Template Sequence  PELIFGATDYTSSIDVWSAGCVLAELLL. GQPIFPGDSGVDQLVEIIKVLGTPTREQIRE
Template Known Secondary structure  TT
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T.SS
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   225....230.........240.........250.. .......260.........270.........280...
 
   588.590.........600.........610.........620.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . PAGCPREMYDLMNLCWTYDVENRPGFTAVELRLRNYYY
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Template Sequence  MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA. . . CAHSFF
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GGGSS









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   284.....290.........300.........310.........320.........330.... .....340
 
   626
Predicted Secondary structure 
Query SS confidence 
Query Sequence  D
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  D
Template Known Secondary structure  G
Template Predicted Secondary structure 
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   341
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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