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Job DescriptionP48025
Confidence100.00%DateWed Jul 10 14:17:05 BST 2013
Rank217Aligned Residues234
% Identity22%Templatec3udbF_
PDB info PDB header:transferaseChain: F: PDB Molecule:serine/threonine-protein kinase srk2e; PDBTitle: crystal structure of snrk2.6
Resolution2.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   365....370.........380.........390.........400.........410.........420....
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Query Sequence  TLEDNELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP
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Template Sequence  YELVKDIGAGNFGVARLMRDKQAN. . ELVAVKYIERGEKI. . . DENVKREIINHRSLRHP
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S
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   21........30.........40.... .....50........ .60.........70.....
 
   425....430...... ...440.........450.........460.........470.........480...
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Query Sequence  YIVRMIGICEAE. SWMLVMEMAELGPLNKYLQQNRHIKDKNIIELVHQVSMGMKYLEESN
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Template Sequence  NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ
Template Known Secondary structure  TB


SS

TT
BSSS

S
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   76...80.........90.........100.........110.........120.........130.....
 
   484.....490......... 500.........510.........520.........530.........540.
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Query Sequence  FVHRDLAARNVLLVTQ. . HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY
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Template Sequence  VAHRDLKLENTLLDGSPAPRLKIADFGYTPAY. . . . . . . . . . . . . . . . . . IAPEVLLKKE
Template Known Secondary structure  SS




GGG


SSS

B





GGG..................


SS
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   136...140.........150.........160....... ..170.......
 
   542.......550.........560.........570. ........580... ......590......
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Query Sequence  KFSSKSDVWSFGVLMWEAFSYGQKPYRGMK. . . . GSEVTAMLEKGE. RMGCPAGCPREMY
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Template Sequence  YDGKVADVWSCGVTLYVMLV. GAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR
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TT

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   193......200.........210.. .......220.........230.........240.........250.
 
   597..600.........610.........620.....
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Query Sequence  DLMNLCWTYDVENRPGFTAVELRLRNYYY
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Template Sequence  HLISRIFVADPAKRISIPEI. . . RNHEWF
Template Known Secondary structure  S
SSGGGS

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   252.......260.........270. ......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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